prot_L-elsbetiae_contig1046.454.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1046.454.1
Unique Nameprot_L-elsbetiae_contig1046.454.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length255
Homology
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A6H5KXB8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KXB8_9PHAE)

HSP 1 Score: 356 bits (914), Expect = 3.440e-118
Identity = 195/259 (75.29%), Postives = 210/259 (81.08%), Query Frame = 0
Query:    1 INPDVGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKA-----AXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSFGLVDDSDASKDD 254
            INP VGLSAKFLIPNVFAWCIGMQSIGLISIS+F AAAILL GLFCYDIFWVFGTEVMMTVAT+IEAPVKFLFP+LTDPSK+YPFSVLGLGDIVIPATFCTLMR    SFD  LEGARQAEAAAARAL  +V +KNP+ALWLDS LGTPVA+       A            AA V  A G  G  RSYFDNSVAAYA+GLGLCF VNF+S+SGQPALLYLNPALL SA  TA+LNGNGEL +LL+FG+  DS AS DD
Sbjct:  262 INPSVGLSAKFLIPNVFAWCIGMQSIGLISISTFPAAAILLTGLFCYDIFWVFGTEVMMTVATKIEAPVKFLFPSLTDPSKRYPFSVLGLGDIVIPATFCTLMR----SFDIYLEGARQAEAAAARALLTEVGNKNPIALWLDSILGTPVAQAGSGVSEASPKGIPPGGRLAAAGVAGAVGEAGGGRSYFDNSVAAYAIGLGLCFTVNFVSKSGQPALLYLNPALLSSAILTAVLNGNGELGKLLAFGVGKDSKASDDD 516          
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A835YS42_9STRA (Signal peptide peptidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS42_9STRA)

HSP 1 Score: 179 bits (453), Expect = 6.160e-52
Identity = 108/242 (44.63%), Postives = 131/242 (54.13%), Query Frame = 0
Query:    1 INPDVGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 242
            + P   L   F++ N  AWCIGMQ+IGLI+I SF  A + L GLF YDI+WVFGT+VM+TVATR EAPVKF+FP   D  + YPF+VLGLGDIVIPA   +L+R +  S          AE  A RA                   GT V                                SYF   VAAYA+GL  CF  N +S+SGQPALLYLNPA++GSA   A +NG GE ++L  F
Sbjct:   60 LYPGADLHGTFMVSNALAWCIGMQAIGLITIQSFLTACVFLGGLFLYDIYWVFGTDVMLTVATRFEAPVKFIFPLPADVERAYPFAVLGLGDIVIPAIVISLLRNLDKSL---------AERDAGRA-------------------GTKV--------------------------------SYFHAGVAAYAMGLAACFVANTLSKSGQPALLYLNPAVIGSALIVAAVNG-GEFRELFDF 240          
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S1Z2G9_TRICV (Hypothetical protein (Fragment) n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z2G9_TRICV)

HSP 1 Score: 165 bits (418), Expect = 2.000e-45
Identity = 108/245 (44.08%), Postives = 126/245 (51.43%), Query Frame = 0
Query:    5 VGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLF--PALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGN-GELQQLLSFGLVD 246
            V +S KFL+ N  AW I M S+G IS+ SF  AAILLAGLFCYDIFWVFGT+VMMTVAT++EAPVKFL+  P   +P K YPFSVLGLGD+VIP  F   M R+                    AL  QV S                                                 YF  + AAYALGL  CFAVN I+ +GQPALLYL+PA +GSA A    NG  GE+      GL +
Sbjct:  201 VAMSQKFLVSNAIAWAIAMTSLGAISLGSFQTAAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYASPPSAEP-KPYPFSVLGLGDVVIPGLFVRFMARMD------------------EALQPQVFS-------------------------------------------------YFTAATAAYALGLTACFAVNEITHAGQPALLYLDPACIGSALAVGAANGQLGEVWNFEEEGLTE 377          
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A6U0R1W4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0R1W4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 2.030e-45
Identity = 97/239 (40.59%), Postives = 126/239 (52.72%), Query Frame = 0
Query:    5 VGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPAL-TDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 242
            V +  KF++ N+ AW + M S+G IS+ SF  A ILL GLFCYDIFWVFGTEVMMTVAT++EAP+KFL+PA  ++  + YPFSVLGLGD+VIP  F  LM +V      K+                                                                    SYF  + AAYALGL  CF VN I+++GQPALLYLNPA +GSA    ++NG  +L ++++F
Sbjct:  248 VAMEQKFILSNIIAWALAMISLGSISLGSFQTAVILLTGLFCYDIFWVFGTEVMMTVATKVEAPIKFLYPAPPSEIERAYPFSVLGLGDVVIPGLFVRLMTKVDQDLKPKV-------------------------------------------------------------------FSYFSAATAAYALGLSACFVVNEITQAGQPALLYLNPACIGSALVCGVING--QLDEIINF 417          
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S4IZL8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IZL8_9STRA)

HSP 1 Score: 158 bits (399), Expect = 1.580e-41
Identity = 99/241 (41.08%), Postives = 125/241 (51.87%), Query Frame = 0
Query:    5 VGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLF---PALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 242
            V ++ KF++ N+ AW + M S+G IS+ SF   AILLAGLFCYDIFWVFGT+VMMTVAT++EAPVKFL+   P L +  K YPFSVLGLGD+VIP  F   M +V    D  L+ A                                                                 SYF  + AAYA+GL  CF VN I+ +GQPALLYL+PA +GSA A      NG+L ++ +F
Sbjct:  327 VAMTQKFMVSNIIAWSLAMTSLGAISLGSFQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYANPPELAE-GKSYPFSVLGLGDVVIPGLFVRFMSKV----DEALKPA---------------------------------------------------------------VGSYFTAATAAYAVGLASCFVVNEITHAGQPALLYLDPACVGSALAVGA--ANGQLSEVWNF 497          
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S2MA48_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MA48_9STRA)

HSP 1 Score: 146 bits (369), Expect = 7.010e-38
Identity = 93/228 (40.79%), Postives = 111/228 (48.68%), Query Frame = 0
Query:    5 VGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPAL-TDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLN 231
            V L  KFLI N  AW +GM S+G          AILLAGLFCYDIFWVFGT+VMMTVAT++EAPVKFL+ A  +D  K YPFSVLGLGD+VIP  F   M +V                       E +  KN                                              SYF  +  AY  GL  CF  N + ++GQPALLYL+P+L+GSA A A +N
Sbjct:  240 VALENKFLISNAIAWALGMVSLGXXXXXXXQTGAILLAGLFCYDIFWVFGTDVMMTVATKVEAPVKFLYTAPPSDTPKDYPFSVLGLGDVVIPGLFVRFMAKVD----------------------EVLQPKN---------------------------------------------LSYFTTATFAYGAGLAACFGANEMFQNGQPALLYLDPSLVGSALACAAVN 400          
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: K0SK77_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SK77_THAOC)

HSP 1 Score: 131 bits (330), Expect = 2.060e-32
Identity = 87/236 (36.86%), Postives = 113/236 (47.88%), Query Frame = 0
Query:    7 LSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPALTDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 242
            +  KF+  N+ AW +GM S               L GLF YD FWVFG++VMMTVAT++EAPVKF+FPA  D  + Y FSVLGLGD+VIP  F  LM +   +                          NP     ++F                                     SYF+ +V AYA GLG CF  N I ++GQPAL+YL+P+L+GSA A A  + NG++ QL  F
Sbjct:  222 MEQKFIASNILAWSLGMASXXXXXXXXXXXXXXXLGGLFFYDAFWVFGSDVMMTVATKVEAPVKFIFPA--DTVRDYNFSVLGLGDLVIPGLFVRLMAKADEAL-------------------------NP-----ENF-------------------------------------SYFNTAVLAYAFGLGACFTANAIFQNGQPALIYLDPSLVGSALACA--SANGQVAQLWDF 386          
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S3T9S7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T9S7_EMIHU)

HSP 1 Score: 124 bits (312), Expect = 4.370e-31
Identity = 86/223 (38.57%), Postives = 113/223 (50.67%), Query Frame = 0
Query:   23 MQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPAL---TDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 242
            M S+G+I++ SF+AAA LL GLFCYD F+VF ++VM+TVAT+IEAP KFL+ A+    D   +YPFSVLGLGD+V+P  F  L+R +      +  G  + EA  A                                                         SYF   + AYA GL   FA N++++SGQPAL+Y+ P+LL SA ATA     GEL  LL F
Sbjct:   58 MTSLGVIALESFAAAAALLLGLFCYDAFFVFKSDVMLTVATQIEAPAKFLWAAVGAGADAGSRYPFSVLGLGDVVVPGAFVGLLRELDKE-QGRAGGGSEEEAREA---------------------------------------------------------SYFQVGLGAYAAGLLSTFAANYLTKSGQPALVYIVPSLLLSAVATAA--SRGELPSLLEF 220          
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S1BCW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCW1_9STRA)

HSP 1 Score: 125 bits (315), Expect = 3.610e-30
Identity = 63/107 (58.88%), Postives = 80/107 (74.77%), Query Frame = 0
Query:    2 NPDVGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPALTDPS--KQYPFSVLGLGDIVIPATFCTLMRRV 106
            +P + ++ KFL+ NV AW IGM S+  ++ISSF   AILL GLF YDIFWVFGTEVMMTVAT+IEAPVKFL+  +      ++YPFSVLGLGDIVIP  F  ++ ++
Sbjct:  281 SPAIAITDKFLVSNVMAWSIGMVSLAAVNISSFQTGAILLGGLFFYDIFWVFGTEVMMTVATKIEAPVKFLYYTVPPDGIPREYPFSVLGLGDIVIPGLFVRMLGKM 387          
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Match: A0A7S3T9S4_EMIHU (Hypothetical protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T9S4_EMIHU)

HSP 1 Score: 124 bits (312), Expect = 1.550e-29
Identity = 86/223 (38.57%), Postives = 113/223 (50.67%), Query Frame = 0
Query:   23 MQSIGLISISSFSAAAILLAGLFCYDIFWVFGTEVMMTVATRIEAPVKFLFPAL---TDPSKQYPFSVLGLGDIVIPATFCTLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPVAKKAAXXXXXXXXXAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCFAVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSF 242
            M S+G+I++ SF+AAA LL GLFCYD F+VF ++VM+TVAT+IEAP KFL+ A+    D   +YPFSVLGLGD+V+P  F  L+R +      +  G  + EA  A                                                         SYF   + AYA GL   FA N++++SGQPAL+Y+ P+LL SA ATA     GEL  LL F
Sbjct:  250 MTSLGVIALESFAAAAALLLGLFCYDAFFVFKSDVMLTVATQIEAPAKFLWAAVGAGADAGSRYPFSVLGLGDVVVPGAFVGLLRELDKE-QGRAGGGSEEEAREA---------------------------------------------------------SYFQVGLGAYAAGLLSTFAANYLTKSGQPALVYIVPSLLLSAVATAA--SRGELPSLLEF 412          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1046.454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXB8_9PHAE3.440e-11875.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YS42_9STRA6.160e-5244.63Signal peptide peptidase-domain-containing protein... [more]
A0A7S1Z2G9_TRICV2.000e-4544.08Hypothetical protein (Fragment) n=2 Tax=Trieres ch... [more]
A0A6U0R1W4_9STRA2.030e-4540.59Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4IZL8_9STRA1.580e-4141.08Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2MA48_9STRA7.010e-3840.79Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
K0SK77_THAOC2.060e-3236.86Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S3T9S7_EMIHU4.370e-3138.57Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S1BCW1_9STRA3.610e-3058.88Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S3T9S4_EMIHU1.550e-2938.57Hypothetical protein n=3 Tax=Emiliania huxleyi Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006639Presenilin/signal peptide peptidaseSMARTSM00730psh_8coord: 3..231
e-value: 0.0014
score: -2.3
IPR007369Peptidase A22B, signal peptide peptidasePFAMPF04258Peptidase_A22Bcoord: 8..242
e-value: 2.0E-42
score: 145.6
IPR007369Peptidase A22B, signal peptide peptidasePANTHERPTHR12174SIGNAL PEPTIDE PEPTIDASEcoord: 8..245
NoneNo IPR availablePANTHERPTHR12174:SF23MINOR HISTOCOMPATIBILITY ANTIGEN H13coord: 8..245
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 207..211
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 231..254
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..206
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..37
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 212..230
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..82
NoneNo IPR availableTMHMMTMhelixcoord: 85..107
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 189..206
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 213..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1046contigL-elsbetiae_contig1046:26673..29374 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1046.454.1mRNA_L-elsbetiae_contig1046.454.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1046 26673..29374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1046.454.1 ID=prot_L-elsbetiae_contig1046.454.1|Name=mRNA_L-elsbetiae_contig1046.454.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
INPDVGLSAKFLIPNVFAWCIGMQSIGLISISSFSAAAILLAGLFCYDIF
WVFGTEVMMTVATRIEAPVKFLFPALTDPSKQYPFSVLGLGDIVIPATFC
TLMRRVGMSFDTKLEGARQAEAAAARALAEQVSSKNPLALWLDSFLGTPV
AKKAASSAGGGTASAGEAAVVLTAPGGDGSTRSYFDNSVAAYALGLGLCF
AVNFISRSGQPALLYLNPALLGSAFATALLNGNGELQQLLSFGLVDDSDA
SKDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006639Preselin/SPP
IPR007369Peptidase_A22B_SPP