mRNA_L-elsbetiae_contig16656.4490.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16656.4490.1
Unique NamemRNA_L-elsbetiae_contig16656.4490.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: D8LTW2_ECTSI (Queuosine salvage protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTW2_ECTSI)

HSP 1 Score: 457 bits (1175), Expect = 1.750e-160
Identity = 225/249 (90.36%), Postives = 233/249 (93.57%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            DCLNFCFWPTPGLEYEHLAFGLKAA+QRDPLALSADRLA ATE+TIRGWFSGF+IPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDE LH GRQCFFY RAQILAADLW AYGRPP GSGS+YAFEDIGELTMFADYRVPQVLAHLGV+EY QALE KI     LQ GSEEEVEIRA+CVQAVEGLR ALARRNV VTSVEIDWRLWHEG+RIKK+IQPHHRTLTCFY
Sbjct:   89 DCLNFCFWPTPGLEYEHLAFGLKAAVQRDPLALSADRLAVATEETIRGWFSGFEIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDETLHQGRQCFFYKRAQILAADLWAAYGRPPPGSGSLYAFEDIGELTMFADYRVPQVLAHLGVLEYSQALETKIDGLERLQPGSEEEVEIRAMCVQAVEGLRAALARRNVVVTSVEIDWRLWHEGERIKKDIQPHHRTLTCFY 337          
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: A0A836CCJ7_9STRA (Queuosine salvage protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCJ7_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.360e-91
Identity = 144/249 (57.83%), Postives = 174/249 (69.88%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            D LNFCFWPTPGLEYEHLA GL  A++ DP ALSA  L+AAT   +  W  GF +PQ++ER +K+RELG VL AHFGG A+ +V  A  SA  L+RL+T LLPGFRDEA++ G Q F Y RAQI+ ADLW AYG    G+  ++ F D+ ELTMFADYRVPQVLAH G + Y  AL  +I +  EL AG EEEVEIRA  VQAVE + +A+      + SVE+DW LWH G+  K  I PHHRTL+ FY
Sbjct:   74 DALNFCFWPTPGLEYEHLASGLARALEADPRALSAAVLSAATPALLASWAPGFALPQMAERVSKVRELGAVLGAHFGGLASNMVQAAGGSAVNLIRLITALLPGFRDEAVYRGSQVFLYKRAQIVVADLWAAYGCR--GADQLFGFRDMAELTMFADYRVPQVLAHAGALVYAPALRQRIESLQELPAGGEEEVEIRAATVQAVERVAEAMKALGAPLLSVELDWLLWHRGEASKDTIAPHHRTLSIFY 320          
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: A0A0M8K9E5_9CHLR (Uncharacterized protein n=2 Tax=Ardenticatenia TaxID=1382928 RepID=A0A0M8K9E5_9CHLR)

HSP 1 Score: 258 bits (658), Expect = 2.400e-82
Identity = 133/249 (53.41%), Postives = 165/249 (66.27%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            D LNFCFWP PGLEYEHLA GLK AI+ DP    A+RL     D +R W  G ++PQ+ ER   +RE+G  L AHFGG+AA LV+ A  SAARLV LLT   PGFRD A++ GRQ FFY RAQI AAD+W A+    +G      F+D+ E+TMFADYRVPQ L   GV+ Y   L  K+ A  E+  GS EE+EIRA  VQAVE LR  LA+R   V +V++DW LW   + +++ + PHHRTLT +Y
Sbjct:   68 DALNFCFWPKPGLEYEHLALGLKRAIEADPHVFDAERLVQVEADDLRRWV-GAELPQMEERVRLVREVGAGLLAHFGGQAANLVSAADHSAARLVSLLTAHFPGFRDHAVYDGRQVFFYKRAQIFAADVWGAFNGAGLGR-----FDDVHEMTMFADYRVPQYLRARGVLVYAPPLAEKVDARQEIAPGSPEEIEIRAATVQAVEHLRSLLAQRGYDVPAVQVDWLLWERAEAVRESLPPHHRTLTIYY 310          
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: A0A7S0P787_CAFRO (Queuosine salvage protein n=4 Tax=Sar TaxID=2698737 RepID=A0A7S0P787_CAFRO)

HSP 1 Score: 258 bits (660), Expect = 4.400e-82
Identity = 139/250 (55.60%), Postives = 172/250 (68.80%), Query Frame = 1
Query:    1 DCLNFCFWPTP-GLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            D LN+CFWP+   +EY+ LA GL+ A++ DP   SA+RL  AT   +RGW +  D+P+  ERA  LRELG VL A +GG+AA LV+   +SA RLV LL   LPGFRDE ++ GR+ F Y RAQILAAD+W AYGR   G  S +AF D+  LTMFADYRVPQ+L  +GV+ Y  ALEA+IAA  EL  GSEEEVEIRA  VQAVE LR A+      + SVE+DW LW  G+R K+++ PHHRT T  Y
Sbjct:  107 DSLNWCFWPSATSMEYDALAVGLRKAVEADPSVFSAERLQGATAADVRGWLAPHDVPEAEERAEMLRELGHVLAAEYGGQAANLVSACGQSACRLVALLASRLPGFRDETVYRGRRVFLYKRAQILAADVWAAYGRLTSGP-SPFAFRDMASLTMFADYRVPQLLLPMGVLRYSPALEARIAAQEELCPGSEEEVEIRAASVQAVEKLRHAMGGT---LLSVELDWLLWQRGERSKEKLPPHHRTRTVCY 352          
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: A0A7S2UWC3_9STRA (Queuosine salvage protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWC3_9STRA)

HSP 1 Score: 249 bits (637), Expect = 2.580e-78
Identity = 125/249 (50.20%), Postives = 165/249 (66.27%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            D LNFCFWPT GLEYEHLA  LK  +  DP A +A  L    E  ++ W  G DIP I  R   LR+LG VL   + G A  +V  +  SA++LV+++   +P FRDE+++ G Q FFY RAQILAAD+W A+GR     G +  F D+ E+TMFADYRVPQ+L H GV++Y Q L   I +  E+ AGS+ E+EIRA  +QAVE L+  L + +V++TSVEIDW LW EG+++K+ IQ HH+T T FY
Sbjct:  129 DSLNFCFWPTKGLEYEHLAIALKNVLIGDPAAFNASNLVNIKESELQKWLPGVDIPLIHARVTALRQLGAVLLNSYDGLAIKMVEESNNSASKLVQMVVSSIPSFRDESVYNGEQVFFYKRAQILAADIWGAFGRQ--SKGHICGFSDMEEVTMFADYRVPQILEHRGVLKYSQRLCQMIVSEEEIPAGSDMEIEIRAATIQAVEMLQHILEKNDVKLTSVEIDWLLWQEGEKLKENIQKHHKTRTMFY 375          
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: A0A5D6YCF7_9STRA (Queuosine salvage protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YCF7_9STRA)

HSP 1 Score: 248 bits (632), Expect = 2.890e-78
Identity = 130/249 (52.21%), Postives = 163/249 (65.46%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            D LNFCFWPT  +EYEHLA GLK A+ RDP AL A+RL + + +T+  WF  F  PQ+ ER  K++ELG VLQ  FGG+A  L+ARA  SA   VRL+   LPGFRD+A++ G Q  FY RAQIL  D+W AYGR   G   V +F DI +LTMFADYRVPQVL   GV+EY + L   + +  E+ +GSE EVEIRA  +QAVE +   +      +  VE+DW LW  G+  K  + PHHRTLT +Y
Sbjct:   76 DALNFCFWPTEHMEYEHLARGLKDALLRDPHALDAERLVSVSSETLMSWFCPFTPPQVDERKRKIQELGEVLQHGFGGQALNLIARAEGSAVEAVRLVLANLPGFRDQAVYRGEQVHFYKRAQILVGDVWAAYGRRSTG---VASFHDIAQLTMFADYRVPQVLRPEGVLEYSEPLARLVDSKTEIPSGSEMEVEIRAATIQAVEQIHAQMEELGHSLKVVELDWLLWQIGEGRKDALLPHHRTLTVYY 321          
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: A0A4D9CUX0_9STRA (Queuosine salvage protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUX0_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.230e-77
Identity = 142/293 (48.46%), Postives = 171/293 (58.36%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWF----------------------------------------SGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYG---RPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDAL-ARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            D LNFCFWPTPGLEYEHLA GL+ A++RDP A +A  LA+ +  T+ GW                                         S F +P +SER  K+RE+G VL  HF G+AA LV  +  SA  LVRLL+   P FRDEALH G Q +FY RAQIL AD+W AYG    PP      YAF D+GELTMFADYRVPQ+L   GV+ Y   L  ++    EL AGSEEEVEIRA  VQAVE +R+   A     + SVE+DW LW EG+R +  + PHHRTL+ FY
Sbjct:   94 DALNFCFWPTPGLEYEHLARGLRRALERDPTAFNAQALASVSPATVAGWVDCPSPPSPSHLSTSTPPTGPGPATGARGTSPPSSPASSPPSSF-LPCLSERVRKVREVGHVLLQHFNGQAADLVRASGFSAVELVRLLSAFFPSFRDEALHQGEQVYFYKRAQILVADIWAAYGCRTDPPFP----YAFRDMGELTMFADYRVPQILRGRGVLRYAPGLAERVDGREELPAGSEEEVEIRAATVQAVESMREVWRAGGKGEILSVELDWLLWQEGERYRDSLPPHHRTLSIFY 381          
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: A0A329RBU5_9STRA (Queuosine salvage protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RBU5_9STRA)

HSP 1 Score: 239 bits (611), Expect = 4.170e-75
Identity = 125/249 (50.20%), Postives = 156/249 (62.65%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            D LNFCFWPT  +EYEHLA GLK A+ RDP  L AD LA  T +T+  WF  F  PQ+ ER  K+RE+G VLQ  F G+A  L+ +A  SA   +RL+    PGFRD AL+ G Q  FY RAQIL  D+W AYGR   G  S   F DIG+LTMFADYRVPQVL   GV+ Y   L   +    E+ AGSE E+EIRA  +QAVE +   +  R   +  +E+DW LW  G+  K+++ PHHRT + +Y
Sbjct:   75 DALNFCFWPTQYMEYEHLARGLKTALLRDPHVLDADNLAMVTNETVTSWFHPFTPPQLDERRRKVREVGEVLQKFFDGQALNLIKKANFSAVEAIRLVLAYFPGFRDHALYKGEQVHFYKRAQILVGDVWAAYGRRTSGIAS---FHDIGKLTMFADYRVPQVLRPEGVLVYSSKLAELVDNKAEIPAGSEMELEIRAATIQAVEQIHKQMINRGHHLEVIELDWLLWQIGEDNKEDLLPHHRTWSIYY 320          
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: A0A0P1A8J2_PLAHL (Queuosine salvage protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8J2_PLAHL)

HSP 1 Score: 238 bits (606), Expect = 2.370e-74
Identity = 123/249 (49.40%), Postives = 160/249 (64.26%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            D LNFCFWPT  +EYEHLA GLKAA+ RDP AL A+ LA  T++T+  WFS +  PQ+ ER  K++E+G VL  HF G+A  L+  A  SA   +RL+     GF+D AL+ G Q  FY RAQIL  D+W AYGR   G   + +F DIG+LTMFADYRVPQVL    V+ Y   L   +   VE+ +GSE EVEIRA  +QAVE +   L  +   +  +E+DW LW  G++ KK++ PHHRT + +Y
Sbjct:   75 DALNFCFWPTKDMEYEHLARGLKAALLRDPHALDAENLANVTKETVASWFSPYTPPQLDERQRKVQEVGVVLLKHFDGKALNLIKSARCSAVEAIRLVLAYFSGFQDHALYKGEQVHFYKRAQILVGDVWAAYGRRTSG---ITSFHDIGKLTMFADYRVPQVLRSDCVIHYSPELAQIVDGKVEIPSGSEMEVEIRAATIQAVEQIHQQLISKGYCLHIIELDWLLWQIGEKNKKDLLPHHRTWSIYY 320          
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Match: A0A3F2S1L5_9STRA (Queuosine salvage protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1L5_9STRA)

HSP 1 Score: 238 bits (606), Expect = 4.870e-74
Identity = 124/249 (49.80%), Postives = 157/249 (63.05%), Query Frame = 1
Query:    1 DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWFSGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTCLLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIGELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAICVQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY 747
            D LNFCFWPT  +EYEHLA GLK A+ +DP AL A  L   + +T+  WF  F  PQ+ ER  K+RE+G VLQ  FGG    L+ +A  SA   +RL+    PGFRD A++ G Q  FY RAQIL  D+W AYGR   G  S Y   DIG+LTMFADYRVPQVL   GVM Y   L   + +  E+ AGSE E+EIRA  +QAVE L   +  +  R+  +E+DW LW  G+  K+++QPHHRT + +Y
Sbjct:   99 DALNFCFWPTENMEYEHLARGLKTALMQDPHALDAKNLVTVSNETVASWFHPFAPPQLDERRRKVREVGQVLQHSFGGLGLNLINQAKFSAVEAIRLVLANFPGFRDHAVYKGEQVHFYKRAQILVGDVWAAYGRRDSGIASFY---DIGKLTMFADYRVPQVLRPEGVMTYSPELAKLVDSKTEIPAGSEMELEIRAATIQAVEMLHKQMLSQGHRLEVIELDWLLWQIGEDNKEKLQPHHRTWSIYY 344          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16656.4490.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTW2_ECTSI1.750e-16090.36Queuosine salvage protein n=2 Tax=Ectocarpus TaxID... [more]
A0A836CCJ7_9STRA1.360e-9157.83Queuosine salvage protein n=1 Tax=Tribonema minus ... [more]
A0A0M8K9E5_9CHLR2.400e-8253.41Uncharacterized protein n=2 Tax=Ardenticatenia Tax... [more]
A0A7S0P787_CAFRO4.400e-8255.60Queuosine salvage protein n=4 Tax=Sar TaxID=269873... [more]
A0A7S2UWC3_9STRA2.580e-7850.20Queuosine salvage protein n=1 Tax=Fibrocapsa japon... [more]
A0A5D6YCF7_9STRA2.890e-7852.21Queuosine salvage protein n=1 Tax=Pythium brassicu... [more]
A0A4D9CUX0_9STRA1.230e-7748.46Queuosine salvage protein n=1 Tax=Nannochloropsis ... [more]
A0A329RBU5_9STRA4.170e-7550.20Queuosine salvage protein n=2 Tax=Phytophthora Tax... [more]
A0A0P1A8J2_PLAHL2.370e-7449.40Queuosine salvage protein n=1 Tax=Plasmopara halst... [more]
A0A3F2S1L5_9STRA4.870e-7449.80Queuosine salvage protein n=2 Tax=Phytophthora ker... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16656contigL-elsbetiae_contig16656:88..2023 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score461.8
Seed ortholog evalue2e-127
Seed eggNOG ortholog2880.D8LTW2
Preferred nameC9orf64
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008477,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016798,GO:0016799,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0101030,GO:1901360
EggNOG free text desc.Chromosome 9 open reading frame 64
EggNOG OGsKOG2524@1,KOG2524@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionProtein of unknown function DUF2419
Ec32 orthologEc-12_004090.1
Exons2
Model size750
Cds size750
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815691.7289574-CDS-L-elsbetiae_contig16656:87..6481622815691.7289574-CDS-L-elsbetiae_contig16656:87..648Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16656 88..648 +
1691683041.0907261-CDS-L-elsbetiae_contig16656:87..6481691683041.0907261-CDS-L-elsbetiae_contig16656:87..648Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16656 88..648 +
1622815691.7409382-CDS-L-elsbetiae_contig16656:1834..20231622815691.7409382-CDS-L-elsbetiae_contig16656:1834..2023Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16656 1835..2023 +
1691683041.100984-CDS-L-elsbetiae_contig16656:1834..20231691683041.100984-CDS-L-elsbetiae_contig16656:1834..2023Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16656 1835..2023 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16656.4490.1prot_L-elsbetiae_contig16656.4490.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16656 88..2023 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16656.4490.1

>prot_L-elsbetiae_contig16656.4490.1 ID=prot_L-elsbetiae_contig16656.4490.1|Name=mRNA_L-elsbetiae_contig16656.4490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=250bp
DCLNFCFWPTPGLEYEHLAFGLKAAIQRDPLALSADRLAAATEDTIRGWF
SGFDIPQISERAAKLRELGCVLQAHFGGEAALLVARAARSAARLVRLLTC
LLPGFRDEALHGGRQCFFYNRAQILAADLWDAYGRPPIGSGSVYAFEDIG
ELTMFADYRVPQVLAHLGVMEYEQALEAKIAAFVELQAGSEEEVEIRAIC
VQAVEGLRDALARRNVRVTSVEIDWRLWHEGKRIKKEIQPHHRTLTCFY*
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mRNA from alignment at L-elsbetiae_contig16656:88..2023+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16656.4490.1 ID=mRNA_L-elsbetiae_contig16656.4490.1|Name=mRNA_L-elsbetiae_contig16656.4490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1936bp|location=Sequence derived from alignment at L-elsbetiae_contig16656:88..2023+ (Laminarionema elsbetiae ELsaHSoW15)
GACTGCCTCAACTTCTGCTTCTGGCCGACGCCGGGGCTCGAGTACGAGCA CCTGGCCTTCGGCCTGAAGGCGGCCATCCAGCGGGACCCCCTCGCGCTCT CCGCCGACCGCCTGGCCGCCGCCACCGAGGACACGATCCGCGGCTGGTTC TCGGGCTTCGACATCCCGCAGATCTCCGAGCGCGCGGCCAAGCTCCGGGA GCTGGGGTGCGTTCTCCAGGCCCACTTCGGCGGCGAGGCGGCCCTGCTGG TGGCGCGGGCGGCCCGCTCCGCCGCCCGCCTTGTGCGCCTGCTCACCTGC CTCCTTCCGGGGTTCCGCGATGAGGCGCTCCACGGCGGCCGGCAGTGCTT CTTCTACAACCGCGCCCAGATCCTGGCGGCGGACCTGTGGGACGCCTACG GGCGGCCGCCGATCGGGTCCGGCAGCGTGTACGCCTTCGAGGACATCGGG GAGCTCACCATGTTCGCGGACTACCGGGTGCCGCAGGTCCTGGCCCACCT GGGCGTGATGGAGTACGAGCAGGCGCTGGAGGCGAAGATCGCCGCGTTTG TGGAGCTGCAGGTGTGTATTTATGTGTGCATTAGACTATGTATGCATGTA GACTATGTAGGTGTTTTTTTTTGTCAGGGGGGGGGGGGGAGGGGGTGTTA TGTACCGTAAATCATGCGTGATGCGTGAGTTCGCACGCCCCCCCCCCCCC CCCCCCGCCCCGCCTTCAAAGGGTGGTTCCCCCCCCCACACAAAAGAGGT TGANNNNNNNNNNGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGC CGGAAAGCAGGGGGGGGGGGGGGGGTCGCCCCCCCCCCCCCCCCCCCTGG ACCGACTTTCAAAGGTTGATTACTCCACACAACAAGAAGAGTGTCAGTGC CGAAAAGGGTGGCGTTGGAAAGATCTCGTCGGTAAATAAATAGCTGTCCG GAAACGTGTCGTTTAGTTGGTGTTGGCACCGTCTTGGTTATGGAGTAATC GAACGTTAAAAATCGGTCCAGGGGGGGGGACTTACGAATGATCGCGGTGG TCTGTGTGTCTGTGTGTCTGTCTGTCTTGTCTCGTCTCGTCTGTCTTCTC CGGCTGGCTTACTGTCCGCTTGGATTTTTGGTCTATGATATCTGATAGCG TAGGTTTAAGAATGTCTCTCCTCGTCCCCGGCTGGGCCCCGTCTTTCTCT CCTCCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCTTCTTAC TCCCCACGACGATCCTCCTCTCTCTTCCCCCCCCGAGGCGCGCCCCCCCA CCCCCACCTCNNNNNNNNNNTTCTTTTTGTTGTTTGGGCACCCGAGACCT CTGTTCTCCACCCCCCCCCCCCCCCCCCCCCCCGCCCCTTGGGGTTTGCC CCCCCCCCCCCCCCCCCCCCCTCCCTCCTCTGATGGAATACGTATTTACC CCAAAGTAGGTCATCATCGTTGTCCGGCCGCGAAGATGCCGCAGCCAAAA ATATTGCTTTAGTCCATAAATACAAGCCCACTCTGATACGCGTGGCCTCG AGCCTTTAAAAGTCCCATGATGTGGTTTCGGCGTGCCGTGTCTTTTTTTT TTTTTGTCACGCCATGTATATAGTTTTTTTTCACAAAAACAACTGCGTGA GCGACACAACAAATACCCTACTCTGCTGTGCGCTGCTGCTGTCGCTACTG CTGACGCTACTGCTGCTGACGCTGCTACTGCGATGCATCCATCCCAGGCC GGCAGCGAGGAGGAAGTGGAGATCCGGGCCATATGCGTGCAGGCGGTTGA GGGGTTGAGGGACGCGTTAGCCAGGCGAAACGTCCGCGTCACCAGCGTGG AGATCGACTGGAGGCTGTGGCACGAGGGCAAGAGGATCAAGAAGGAGATC CAACCACATCACCGAACGCTCACCTGTTTCTACTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16656:88..2023+

>mRNA_L-elsbetiae_contig16656.4490.1 ID=mRNA_L-elsbetiae_contig16656.4490.1|Name=mRNA_L-elsbetiae_contig16656.4490.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1500bp|location=Sequence derived from alignment at L-elsbetiae_contig16656:88..2023+ (Laminarionema elsbetiae ELsaHSoW15)
GACTGCCTCAACTTCTGCTTCTGGCCGACGCCGGGGCTCGAGTACGAGCA
CCTGGCCTTCGGCCTGAAGGCGGCCATCCAGCGGGACCCCCTCGCGCTCT
CCGCCGACCGCCTGGCCGCCGCCACCGAGGACACGATCCGCGGCTGGTTC
TCGGGCTTCGACATCCCGCAGATCTCCGAGCGCGCGGCCAAGCTCCGGGA
GCTGGGGTGCGTTCTCCAGGCCCACTTCGGCGGCGAGGCGGCCCTGCTGG
TGGCGCGGGCGGCCCGCTCCGCCGCCCGCCTTGTGCGCCTGCTCACCTGC
CTCCTTCCGGGGTTCCGCGATGAGGCGCTCCACGGCGGCCGGCAGTGCTT
CTTCTACAACCGCGCCCAGATCCTGGCGGCGGACCTGTGGGACGCCTACG
GGCGGCCGCCGATCGGGTCCGGCAGCGTGTACGCCTTCGAGGACATCGGG
GAGCTCACCATGTTCGCGGACTACCGGGTGCCGCAGGTCCTGGCCCACCT
GGGCGTGATGGAGTACGAGCAGGCGCTGGAGGCGAAGATCGCCGCGTTTG
TGGAGCTGCAGGACTGCCTCAACTTCTGCTTCTGGCCGACGCCGGGGCTC
GAGTACGAGCACCTGGCCTTCGGCCTGAAGGCGGCCATCCAGCGGGACCC
CCTCGCGCTCTCCGCCGACCGCCTGGCCGCCGCCACCGAGGACACGATCC
GCGGCTGGTTCTCGGGCTTCGACATCCCGCAGATCTCCGAGCGCGCGGCC
AAGCTCCGGGAGCTGGGGTGCGTTCTCCAGGCCCACTTCGGCGGCGAGGC
GGCCCTGCTGGTGGCGCGGGCGGCCCGCTCCGCCGCCCGCCTTGTGCGCC
TGCTCACCTGCCTCCTTCCGGGGTTCCGCGATGAGGCGCTCCACGGCGGC
CGGCAGTGCTTCTTCTACAACCGCGCCCAGATCCTGGCGGCGGACCTGTG
GGACGCCTACGGGCGGCCGCCGATCGGGTCCGGCAGCGTGTACGCCTTCG
AGGACATCGGGGAGCTCACCATGTTCGCGGACTACCGGGTGCCGCAGGTC
CTGGCCCACCTGGGCGTGATGGAGTACGAGCAGGCGCTGGAGGCGAAGAT
CGCCGCGTTTGTGGAGCTGCAGGCCGGCAGCGAGGAGGAAGTGGAGATCC
GGGCCATATGCGTGCAGGCGGTTGAGGGGTTGAGGGACGCGTTAGCCAGG
CGAAACGTCCGCGTCACCAGCGTGGAGATCGACTGGAGGCTGTGGCACGA
GGGCAAGAGGATCAAGAAGGAGATCCAACCACATCACCGAACGCTCACCT
GTTTCTACTGAGCCGGCAGCGAGGAGGAAGTGGAGATCCGGGCCATATGC
GTGCAGGCGGTTGAGGGGTTGAGGGACGCGTTAGCCAGGCGAAACGTCCG
CGTCACCAGCGTGGAGATCGACTGGAGGCTGTGGCACGAGGGCAAGAGGA
TCAAGAAGGAGATCCAACCACATCACCGAACGCTCACCTGTTTCTACTGA
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