mRNA_L-elsbetiae_contig1663.4480.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1663.4480.1
Unique NamemRNA_L-elsbetiae_contig1663.4480.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 229 bits (583), Expect = 1.900e-63
Identity = 153/299 (51.17%), Postives = 189/299 (63.21%), Query Frame = 3
Query: 1002 NPNSQIS-GDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQ-QGGNPASVGGYVNAQDSFGAAPLKHAVGGCSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKK--VREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEEKRKDKITSESLWMALPIL--RRKARRRGVVLAPLLRFSSR 1880
            N NS+ S G TPLY AA +G VDA R+LL AKADPLL      SG T LPLDAAA  GH  VV EL++Q+G++ CGG SGGV AL  AA+ ++++ M +L  AGVVDTG AL  AA +GGE P+KFLLEQ +         YVN +D  G  PL   +    PRV  VR L++A ADTTS V   +  GG  D   TPL  TMN +R K   V    A+ EQL+  E IRRLLL+VEAVHA+SWLW S +   T AA  +  D+ T+ S  + LP+L  RR+AR R V LA LLR+SS+
Sbjct:  140 NLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYRPRV--VRLLVEAGADTTSPVAVRNQLGGD-DVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA-RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434          
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 2.720e-57
Identity = 140/299 (46.82%), Postives = 180/299 (60.20%), Query Frame = 3
Query: 1002 NPNSQI-SGDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQG--GNPASVGGYVNAQDSFGAAPLKHAVGGC-SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVRE-KDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSRS 1883
            NP+ Q+  G T L+ AA  G V  +R LLR  A+PLL +       T++PLD AA  GH  VV EL+Q+LG+E C   S G  AL +AA  +H+D MA+L  AGVVDTG AL  AA  G EA VKFLL  +   G     G Y+NA+D  G  PL     GC S   R+VR L+DA ADTTS VQ  +  GG V F  TPLA+T   LR+K V + K AT+E L   E I RLLL+V+AVHA+SWLW S  P    A E   +  + +  L + LPIL+R+ +RR  ++A LLR+S ++
Sbjct:  232 NPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVV-FNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGRATETDPEPPLPA--LKLMLPILKRRTKRRCGLVATLLRYSVKT 527          
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 4.300e-51
Identity = 136/290 (46.90%), Postives = 172/290 (59.31%), Query Frame = 3
Query: 1023 GDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASV-GGYVNAQDSFGAAPLKHAVGGCSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEE---KRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSR 1880
            G TPLY AA  G V AV +LL AKADPLL        E  LPLD AA  GH  VV EL++Q+G++ CGG SGG +AL  AA    +D MA+L  AGVVDTG AL  AA +GGEAP+KFLLEQ  G  ++    Y+N  +  G   L   +  C PRV  V+ L++A ADTTS V   +   G+ DF  TPL  TM  L  +    K  T E+ N  E IRRLLL+ EAVHA+SWLW S  P  T+A  +   +     T+ + ++ L I RR   R+G+ LA LLR+SS+
Sbjct:  148 GATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLLDGIQRCRPRV--VQLLVEAGADTTSPVLICN-QPGEDDFHITPLGLTMCLLGGRSA--KPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGL-LAALLRYSSK 431          
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 7.990e-51
Identity = 132/297 (44.44%), Postives = 174/297 (58.59%), Query Frame = 3
Query: 1017 ISGDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLKHAVGGC-----SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPP----TTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSR 1880
            + G+TPL+RA + G ++A R LLRA A+PL+ +       T LPLD+AA  G++ V+ EL+Q++G+E CGG S G  AL  A  G  V  MA+L  AGVVDTG AL  +A  G EA VK+LL+    +    G YVN +D  G  PL  ++  C     S   RV R L++A ADTT+ ++ T+ S G V F  TPL  T++ L+ KKV     ++++L   EGIRRLLLQVEAVHA SWLW S+         NAAE        +  L   LPILRR+ARR GVV   L R   +
Sbjct:  132 VDGETPLFRAMTEGQLEATRELLRANANPLITRAPLP---TLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGP-GAYVNVRDRNGTTPLLSSIYVCGVDEQSSFPRVARLLVEAGADTTTELRRTN-SMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRK 423          
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 2.450e-44
Identity = 121/259 (46.72%), Postives = 143/259 (55.21%), Query Frame = 3
Query: 1092 KADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVN-AQDSFGAAPLKHAVGGC-SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTT---NAAEEKRKDKITSESLWMALPILRRKARRRGVVL 1853
            KA+ LL      SG T +PLD A   GH  VV EL  QLGV  CGGVSGGV++L  A   + VD M +L   GVVDTG AL  AA    E  VKFLL+ Q G  A    YVN   D FG  PL   +  C S   R+ R LIDAEADT S V  T  SG       TPL +  +SLRQ KV  K+ATEEQL + + I RLL QV+AVHA+SWLW S+    +    AA  + K  I    L     +LR    +RGVV+
Sbjct:  155 KANTLLASVPAPSGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQAGGGAW---YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTK-SGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVV 409          
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 1.130e-43
Identity = 117/264 (44.32%), Postives = 145/264 (54.92%), Query Frame = 3
Query: 1101 PLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLKHAV--GGCSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHS-AVPPTTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSRS 1883
            PLL  ++  SG T +PLD AA  GH+ V  ELVQ+ G+  C G S GVDALG AA  +H+D MA+L  AGVVDTG AL      G E  +KFLLEQ+G   A        +D  G  PL  AV  G CSPRV  VR L+DA AD T AV+  D  G    +  TPL      L +K V E  AT +QL N    RRLLLQVE VHA SWLW   A  P     +  + +    + L   LPI+ R++ RRG  L  + R + ++
Sbjct:  170 PLLPTRMS-SGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQKGEGTARTTYASTPRDGRGHTPLLSAVTTGPCSPRV--VRLLVDAGADATLAVRVPDGFGRSTKY--TPLDCATRCLAEKVVDEDFATAQQLRNLRASRRLLLQVEVVHATSWLWGGHAGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFRLAKKA 428          
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D7FXY7_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY7_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.380e-40
Identity = 128/307 (41.69%), Postives = 165/307 (53.75%), Query Frame = 3
Query: 1002 NPNSQ-ISGDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLKH---------AVGGCSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEEKRKDKITSESLWMALPIL----RRKARRRGVVLAPLLRFSSR 1880
            N NS+   G TPL+ AA  G VDAVR+LL AK DPLL   +  S   SLPLD AA  GH+ VV EL++Q+G+  CGG SGGV AL  AAR +H+D + VL  AGVVDTG A                + ++G    SVG     ++       +H         A      R RVVR L++A ADTTS V      G   D I TP+  TM  L    +  +  TEEQLN  E I RLLL+VEA+HA+SWLW S +   T +  +   D+ TS+S      +L    R +++ R V LA LLR+SS+
Sbjct:   42 NLNSRRFDGATPLFLAAWEGNVDAVRLLLLAKVDPLLTPHLGTSERASLPLDVAAGLGHLEVVNELIRQVGIGGCGGSSGGVRALQQAARNKHLDMLTVLTNAGVVDTGLARGR------------RIWRRGPLEVSVGAGKGEENHGWTCVCEHPQRCRFDAIACWHQRCRPRVVRLLVEAGADTTSTVPIDGLPG--TDNI-TPMGLTMLLLHD--LGTEPLTEEQLNALEAIHRLLLRVEALHAVSWLWSSDICNCTYSTAQGT-DRTTSKSTAGTPLVLTMRQRARSKEREVPLAALLRYSSK 330          
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.540e-39
Identity = 111/246 (45.12%), Postives = 134/246 (54.47%), Query Frame = 3
Query: 1170 GHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVN-AQDSFGAAPLKHAVGGC-SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPP---TTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSRSAGG 1892
            GH  VV EL+QQLGV  CGGVS GV++L  AA  ++VD M +L   GVVDTG AL  AA +  E  VKFLL+ Q G       YVN   D FG  PL   +  C S   R+ R LID  ADT S V  T  SG       TPL +   SLRQ KV  K+ATEEQL + + I RLL Q+EAVHA+SWLW S+  P      AA  + K      +L     +LR    +RGVVL  + R +     G
Sbjct:  191 GHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQAGGGTW---YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTR-SGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEELVRG 432          
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 4.810e-39
Identity = 111/268 (41.42%), Postives = 155/268 (57.84%), Query Frame = 3
Query: 1101 PLLGKK-VQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVDTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLKHAVGGC--SPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHS-AVPPTTNAAEEKR---KDKITSES-LWMALPILRRKARRRGVVLAPLLRFSSR 1880
            PLLG+      G   LPLDAA    H  VV +L+QQLG++ CGG S G DA  WA + +  D + +LA  G +DTG  L  AA FG EA VK LL+QQ G       YVN +   G  P+   +G    S   RV+R  +DA ADT S V+ T+  G ++ F GTPLAYT   LR ++ R  D+T+ +  + E +RR+LLQ+EA+ A+SW W S A+     A ++ R   K ++T ++ L + LP  RRKAR R V++  + R+S +
Sbjct:  333 PLLGRMDTYLRGRIILPLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDTYVNKKQPDGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQL-FRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLP-RRRKARARRVLVMAMSRYSRK 598          
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 9.210e-39
Identity = 116/274 (42.34%), Postives = 151/274 (55.11%), Query Frame = 3
Query: 1083 LRAKADPLLGKKVQQSGETSLPLDAAASFGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVVD-TGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVN-AQDSFGAAPLKHAVGG-----CSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLRQKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEEKRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSRS 1883
            L AKA+PLL    + SG + +PL+ AA  G   VV EL+++ G+  CGG SGG+DAL  AA    VD M++L  AGVVD  G AL  A   G EA V FLL QQ     +   YVN A+D  G   L  +  G     C+PR+   RRL+DA ADTTSAVQ       +     TPL Y  +   ++   +  AT+EQL   E  RR+LL+V AVHA+SW+W S  P     A   R  K +   L   LP+LRR+A RR ++   L R+S +S
Sbjct:  138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQT--SYVNIARDDDGLTALLWSFRGNKNKPCNPRI--TRRLVDAGADTTSAVQLR-AKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPANSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYSKKS 406          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1663.4480.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJA9_9PHAE1.900e-6351.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI2.720e-5746.82EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5KQV0_9PHAE4.300e-5146.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJF9_ECTSI7.990e-5144.44EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE2.450e-4446.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LL76_ECTSI1.130e-4344.32EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FXY7_ECTSI1.380e-4041.69EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1U9_ECTSI1.540e-3945.12EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KSA9_9PHAE4.810e-3941.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVU3_ECTSI9.210e-3942.34EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1663contigL-elsbetiae_contig1663:11338..14244 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score219.9
Seed ortholog evalue2.6e-54
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size2432
Cds size1509
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1663.4480.1prot_L-elsbetiae_contig1663.4480.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1663 11845..13828 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815690.8245993-UTR-L-elsbetiae_contig1663:11337..118441622815690.8245993-UTR-L-elsbetiae_contig1663:11337..11844Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1663 11338..11844 -
1691683040.5039475-UTR-L-elsbetiae_contig1663:11337..118441691683040.5039475-UTR-L-elsbetiae_contig1663:11337..11844Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1663 11338..11844 -
1622815690.8717663-UTR-L-elsbetiae_contig1663:13828..142441622815690.8717663-UTR-L-elsbetiae_contig1663:13828..14244Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1663 13829..14244 -
1691683040.5452366-UTR-L-elsbetiae_contig1663:13828..142441691683040.5452366-UTR-L-elsbetiae_contig1663:13828..14244Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1663 13829..14244 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815690.8481271-CDS-L-elsbetiae_contig1663:11844..119021622815690.8481271-CDS-L-elsbetiae_contig1663:11844..11902Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1663 11845..11902 -
1691683040.5154374-CDS-L-elsbetiae_contig1663:11844..119021691683040.5154374-CDS-L-elsbetiae_contig1663:11844..11902Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1663 11845..11902 -
1622815690.8606472-CDS-L-elsbetiae_contig1663:12377..138281622815690.8606472-CDS-L-elsbetiae_contig1663:12377..13828Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1663 12378..13828 -
1691683040.5327833-CDS-L-elsbetiae_contig1663:12377..138281691683040.5327833-CDS-L-elsbetiae_contig1663:12377..13828Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1663 12378..13828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1663.4480.1

>prot_L-elsbetiae_contig1663.4480.1 ID=prot_L-elsbetiae_contig1663.4480.1|Name=mRNA_L-elsbetiae_contig1663.4480.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=503bp
MEAGADLEAADPEGVTPLYLAAQAGHSAVTIEAALSKGGTPLQLAAHNGH
SAVTTALTEAGADLGAVTSQGFTPLHLAVQNGHSATTTALIEAGADLEAA
NSKGSTLLYLAAQNGHSAVTTALIEAGADFEAAIAEGYCTPLHAAAQNGH
STVTTALIEAGADLAAVTSQGSTTLHLAAHNGHSAVTTALIDAGANPNSQ
ISGDTPLYRAASRGYVDAVRVLLRAKADPLLGKKVQQSGETSLPLDAAAS
FGHMTVVLELVQQLGVEDCGGVSGGVDALGWAARGEHVDTMAVLAGAGVV
DTGTALCTAASFGGEAPVKFLLEQQGGNPASVGGYVNAQDSFGAAPLKHA
VGGCSPRVRVVRRLIDAEADTTSAVQSTDTSGGKVDFIGTPLAYTMNSLR
QKKVREKDATEEQLNNFEGIRRLLLQVEAVHAMSWLWHSAVPPTTNAAEE
KRKDKITSESLWMALPILRRKARRRGVVLAPLLRFSSRSAGGDVDSGALV
DV*
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mRNA from alignment at L-elsbetiae_contig1663:11338..14244-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1663.4480.1 ID=mRNA_L-elsbetiae_contig1663.4480.1|Name=mRNA_L-elsbetiae_contig1663.4480.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2907bp|location=Sequence derived from alignment at L-elsbetiae_contig1663:11338..14244- (Laminarionema elsbetiae ELsaHSoW15)
TCGGCGGTGACGACGGCGCTGACCGAGGCAGGCGCAGACCTTGGAGCAGT CACTTCTCAAGGCTCAACACCGCTTCACTTGGCAGCACACAACGGGCATT CGGCGATGACGACAGCGCTGATCGAGGCAGGCGCAGACCTCGGAGCAGTC ACTTCTGAAGGCTATATGCCGCTTCACCTGGCAGCACACAACGGGCATTC GGCGGTGAGGACAGCGCTGACCGAGGCAGGCGCAGACCTCGGAGCAGTCA CTTCTCAAGGCTTTACACCGCTTCACTTGGCAGCGCAGAACGGGCATTCG GCGATGACACAGCGCTGATCGAGGCAGGCGCAGACCTCGAAGCAGCTTTA TTTCAAGGCTTTACGCCGCTTCACTTGGCAGTACACAACGGGCATTCGGC GGCGACGACAGCGCTGATGGAGGCAGGCGCAGATCTCGAGGCAGCCGACC CTGAAGGCGTTACACCGCTCTACCTGGCAGCACAGGCCGGGCATTCGGCG GTGACGATCGAAGCAGCTTTATCTAAAGGCGGTACACCGCTTCAACTGGC GGCACACAACGGGCATTCGGCGGTGACGACAGCGCTGACCGAGGCAGGCG CAGATCTCGGAGCAGTCACTTCTCAAGGCTTTACACCGCTTCACTTGGCA GTACAGAACGGGCATTCGGCGACGACGACAGCGCTGATCGAGGCAGGCGC AGACCTCGAAGCAGCCAACTCTAAAGGCTCTACACTGCTTTACCTGGCAG CACAGAACGGGCATTCGGCGGTGACGACAGCGCTGATCGAGGCAGGCGCA GACTTCGAAGCAGCCATCGCTGAAGGTTATTGTACACCGCTTCACGCGGC AGCTCAGAACGGGCATTCGACGGTGACGACAGCGCTGATCGAGGCAGGCG CAGACCTCGCAGCAGTCACTTCTCAAGGCTCTACGACGCTTCACCTGGCA GCACACAACGGGCATTCGGCGGTGACGACAGCGCTGATCGACGCAGGCGC AAATCCCAACAGCCAGATAAGCGGGGACACGCCGCTCTACCGCGCGGCAT CGAGGGGATACGTGGACGCCGTCAGGGTTCTTCTTCGTGCCAAGGCAGAT CCCTTGTTAGGCAAGAAGGTTCAGCAGTCTGGCGAGACATCGCTTCCGCT GGACGCGGCGGCGTCATTCGGGCACATGACGGTGGTGCTCGAGCTAGTAC AGCAGCTTGGGGTCGAAGATTGCGGCGGTGTAAGCGGCGGGGTAGACGCT CTTGGTTGGGCCGCACGGGGCGAGCATGTAGACACCATGGCAGTCTTAGC TGGCGCTGGAGTGGTCGATACGGGCACGGCCCTATGCACGGCAGCCAGCT TTGGCGGCGAGGCCCCCGTGAAGTTCCTTTTGGAGCAGCAAGGGGGAAAT CCTGCCAGTGTGGGTGGATACGTGAACGCCCAGGACTCTTTCGGCGCAGC TCCCTTGAAGCATGCCGTTGGCGGTTGCTCTCCTAGGGTTAGGGTTGTGC GTCGGCTCATTGACGCCGAGGCGGACACGACATCGGCCGTTCAAAGTACG GACACCTCGGGGGGTAAGGTGGACTTCATCGGCACTCCTCTGGCTTACAC GATGAACAGCCTCCGCCAGAAGAAGGTCAGGGAGAAAGACGCCACGGAAG AGCAGCTGAACAACTTTGAGGGCATCCGCCGCTTGCTTTTGCAGGTGGAG GCTGTTCATGCGATGTCCTGGTTATGGCACAGCGCTGTCCCGCCCACCAC CAATGCTGCAGAGGAAAAACGCAAGGACAAGATAACTTCGGAATCACTGT GGATGGCTTTGCCGATACTGAGGCGAAAGGCGAGGAGGCGTGGTGTGGTC TTGGCGCCCCTATTGAGGTGGGTGGCGATATGAGAGCACGAGGTAGGGCT TCGCTTTTGACAATTCTGCTACATATGTGCTCTCGTTGTTGGCTTTGGTG ACCCCTCTCATGTAGCGGCATTTCGTGCGGTCTCTCTCATTGCCGCTGCT ACTGATGATTTTTGTTGTCGCCAACTGCGACCGCTGCTGCTTGTCACGGC TCCCGATACACTCCCTGCCGCTTTCTACGTACGTCGCGGCTTTGTGCACC CAAACCCGGTTCGCGGGCTAAATGTATCCGGGTCGTTTGCTTGTCAATTT ATTCTCCCTGTGTGCCAAACTATTTTGTTGCTTGGAATTACAGCTGCTTG TTCAATAACCCATACTGGGTGTCTTTGGAAAAAACACCAACCTGCGCATG AAAGCTCGAGCAAGATCACTTACCTGCCGCTGTATGTTTCTCCCCCTGCT CCAAACTCGTCATCCTTACCGCGACCGCGGACGTCTGTTCAGGTTTTCAT CGAGATCGGCTGGTGGTGATGTTGACAGTGGCGCTTTGGTGGACGTTTAG CTTTGCCTGTGGTATGCGCGGCGTTTGGAGTTTGGAGGTACTGCAAAGTG GTTCTGATAGCGGAGCCGCAAGGGAAGCCGTGCCAGCTAAAGTTGCTTAC GTGAAATAGCCCGGCGTCTCCGTAGCTGGTGGAGCCTCTATACAAGGACA GGACCGTGTCGATGGTTGGCCGTTCACAGTATCAACACTGGCGGTTGATT GACGTCGCCTCTACTAGACGACGCTGCGAATTTGCTAGTTAAGGTTGAGG CCGGTGCTACGGGCAGCAATTCCGACTGTCGTGTGTGTGATGTTGTCATG GATACCCAACGAGGCGGCTTGTGGTACGATAGCCGCTGTTGTCTAGGCCG TGTGCTCGCGTACGTCACATGTAGTTGTGGGGGGTTTTGGCGGTTTATTC TCGTATTTTTCAGTGGCCTCCGTAGATCGTGCACTTCTCGCCTCAGTTAG TTGAAGCAGCTCTCTACATAGGTATAATCTCCGAAATTCCAGAAAAGGGT TTTGCAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1663:11338..14244-

>mRNA_L-elsbetiae_contig1663.4480.1 ID=mRNA_L-elsbetiae_contig1663.4480.1|Name=mRNA_L-elsbetiae_contig1663.4480.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3018bp|location=Sequence derived from alignment at L-elsbetiae_contig1663:11338..14244- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGGCAGGCGCAGATCTCGAGGCAGCCGACCCTGAAGGCGTTACACC
GCTCTACCTGGCAGCACAGGCCGGGCATTCGGCGGTGACGATCGAAGCAG
CTTTATCTAAAGGCGGTACACCGCTTCAACTGGCGGCACACAACGGGCAT
TCGGCGGTGACGACAGCGCTGACCGAGGCAGGCGCAGATCTCGGAGCAGT
CACTTCTCAAGGCTTTACACCGCTTCACTTGGCAGTACAGAACGGGCATT
CGGCGACGACGACAGCGCTGATCGAGGCAGGCGCAGACCTCGAAGCAGCC
AACTCTAAAGGCTCTACACTGCTTTACCTGGCAGCACAGAACGGGCATTC
GGCGGTGACGACAGCGCTGATCGAGGCAGGCGCAGACTTCGAAGCAGCCA
TCGCTGAAGGTTATTGTACACCGCTTCACGCGGCAGCTCAGAACGGGCAT
TCGACGGTGACGACAGCGCTGATCGAGGCAGGCGCAGACCTCGCAGCAGT
CACTTCTCAAGGCTCTACGACGCTTCACCTGGCAGCACACAACGGGCATT
CGGCGGTGACGACAGCGCTGATCGACGCAGGCGCAAATCCCAACAGCCAG
ATAAGCGGGGACACGCCGCTCTACCGCGCGGCATCGAGGGGATACGTGGA
CGCCGTCAGGGTTCTTCTTCGTGCCAAGGCAGATCCCTTGTTAGGCAAGA
AGGTTCAGCAGTCTGGCGAGACATCGCTTCCGCTGGACGCGGCGGCGTCA
TTCGGGCACATGACGGTGGTGCTCGAGCTAGTACAGCAGCTTGGGGTCGA
AGATTGCGGCGGTGTAAGCGGCGGGGTAGACGCTCTTGGTTGGGCCGCAC
GGGGCGAGCATGTAGACACCATGGCAGTCTTAGCTGGCGCTGGAGTGGTC
GATACGGGCACGGCCCTATGCACGGCAGCCAGCTTTGGCGGCGAGGCCCC
CGTGAAGTTCCTTTTGGAGCAGCAAGGGGGAAATCCTGCCAGTGTGGGTG
GATACGTGAACGCCCAGGACTCTTTCGGCGCAGCTCCCTTGAAGCATGCC
GTTGGCGGTTGCTCTCCTAGGGTTAGGGTTGTGCGTCGGCTCATTGACGC
CGAGGCGGACACGACATCGGCCGTTCAAAGTACGGACACCTCGGGGGGTA
AGGTGGACTTCATCGGCACTCCTCTGGCTTACACGATGAACAGCCTCCGC
CAGAAGAAGGTCAGGGAGAAAGACGCCACGGAAGAGCAGCTGAACAACTT
TGAGGGCATCCGCCGCTTGCTTTTGCAGGTGGAGGCTGTTCATGCGATGT
CCTGGTTATGGCACAGCGCTGTCCCGCCCACCACCAATGCTGCAGAGGAA
AAACGCAAGGACAAGATAACTTCGGAATCACTGTGGATGGCTTTGCCGAT
ACTGAGGCGAAAGGCGAGGAGGCGTGGTGTGGTCTTGGCGCCCCTATTGA
GATGGAGGCAGGCGCAGATCTCGAGGCAGCCGACCCTGAAGGCGTTACAC
CGCTCTACCTGGCAGCACAGGCCGGGCATTCGGCGGTGACGATCGAAGCA
GCTTTATCTAAAGGCGGTACACCGCTTCAACTGGCGGCACACAACGGGCA
TTCGGCGGTGACGACAGCGCTGACCGAGGCAGGCGCAGATCTCGGAGCAG
TCACTTCTCAAGGCTTTACACCGCTTCACTTGGCAGTACAGAACGGGCAT
TCGGCGACGACGACAGCGCTGATCGAGGCAGGCGCAGACCTCGAAGCAGC
CAACTCTAAAGGCTCTACACTGCTTTACCTGGCAGCACAGAACGGGCATT
CGGCGGTGACGACAGCGCTGATCGAGGCAGGCGCAGACTTCGAAGCAGCC
ATCGCTGAAGGTTATTGTACACCGCTTCACGCGGCAGCTCAGAACGGGCA
TTCGACGGTGACGACAGCGCTGATCGAGGCAGGCGCAGACCTCGCAGCAG
TCACTTCTCAAGGCTCTACGACGCTTCACCTGGCAGCACACAACGGGCAT
TCGGCGGTGACGACAGCGCTGATCGACGCAGGCGCAAATCCCAACAGCCA
GATAAGCGGGGACACGCCGCTCTACCGCGCGGCATCGAGGGGATACGTGG
ACGCCGTCAGGGTTCTTCTTCGTGCCAAGGCAGATCCCTTGTTAGGCAAG
AAGGTTCAGCAGTCTGGCGAGACATCGCTTCCGCTGGACGCGGCGGCGTC
ATTCGGGCACATGACGGTGGTGCTCGAGCTAGTACAGCAGCTTGGGGTCG
AAGATTGCGGCGGTGTAAGCGGCGGGGTAGACGCTCTTGGTTGGGCCGCA
CGGGGCGAGCATGTAGACACCATGGCAGTCTTAGCTGGCGCTGGAGTGGT
CGATACGGGCACGGCCCTATGCACGGCAGCCAGCTTTGGCGGCGAGGCCC
CCGTGAAGTTCCTTTTGGAGCAGCAAGGGGGAAATCCTGCCAGTGTGGGT
GGATACGTGAACGCCCAGGACTCTTTCGGCGCAGCTCCCTTGAAGCATGC
CGTTGGCGGTTGCTCTCCTAGGGTTAGGGTTGTGCGTCGGCTCATTGACG
CCGAGGCGGACACGACATCGGCCGTTCAAAGTACGGACACCTCGGGGGGT
AAGGTGGACTTCATCGGCACTCCTCTGGCTTACACGATGAACAGCCTCCG
CCAGAAGAAGGTCAGGGAGAAAGACGCCACGGAAGAGCAGCTGAACAACT
TTGAGGGCATCCGCCGCTTGCTTTTGCAGGTGGAGGCTGTTCATGCGATG
TCCTGGTTATGGCACAGCGCTGTCCCGCCCACCACCAATGCTGCAGAGGA
AAAACGCAAGGACAAGATAACTTCGGAATCACTGTGGATGGCTTTGCCGA
TACTGAGGCGAAAGGCGAGGAGGCGTGGTGTGGTCTTGGCGCCCCTATTG
AGGTTTTCATCGAGATCGGCTGGTGGTGATGTTGACAGTGGCGCTTTGGT
GGACGTTTAGGTTTTCATCGAGATCGGCTGGTGGTGATGTTGACAGTGGC
GCTTTGGTGGACGTTTAG
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