prot_L-elsbetiae_contig16612.4473.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16612.4473.1
Unique Nameprot_L-elsbetiae_contig16612.4473.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length146
Homology
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: D7FYM5_ECTSI (Superkiller viralicidic activity 2-like 2 (ATP-dependent helicase SKIV2L2) conserved hypothetical pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYM5_ECTSI)

HSP 1 Score: 290 bits (741), Expect = 1.640e-89
Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 0
Query:    1 YSVYPADWKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            YSVYPADWKPDTTYRPA K AKEYPFTLDPFQKQAI+YIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR
Sbjct:   86 YSVYPADWKPDTTYRPAPKPAKEYPFTLDPFQKQAIEYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 231          
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A6A4CGB4_9STRA (ATP-dependent RNA helicase n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4CGB4_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.870e-76
Identity = 124/147 (84.35%), Postives = 131/147 (89.12%), Query Frame = 0
Query:    1 YSVYPADWKPDTTYRPAAK-AAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            +SVYP D++   T   AAK  AK YPFTLDPFQ+QA+ YIE  ESVLVSAHTSAGKT  AEYAIAK LRDKQRVIYTSPIKALSNQK+RDL+EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR
Sbjct:   73 FSVYPPDYEATPTAGAAAKNPAKTYPFTLDPFQQQAVDYIEAGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 219          
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A7S2V2R9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2R9_9STRA)

HSP 1 Score: 239 bits (610), Expect = 3.970e-74
Identity = 121/147 (82.31%), Postives = 129/147 (87.76%), Query Frame = 0
Query:    1 YSVYPADW-KPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            YS YP DW KPD T       AK YPF LDPFQ+QA++ +ER ESVLV+AHTSAGKTV AEYAIAK LRDKQRVIYTSPIKALSNQKFRD+QEEF DVGLMTGDITINPSATCLIMTTEILRSMLYRG+E+MREVAWVIYDEIHYMR
Sbjct:   23 YSAYPIDWVKPDYTEMDERAPAKSYPFKLDPFQQQAVRCVERGESVLVAAHTSAGKTVVAEYAIAKSLRDKQRVIYTSPIKALSNQKFRDMQEEFTDVGLMTGDITINPSATCLIMTTEILRSMLYRGNEIMREVAWVIYDEIHYMR 169          
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A836C7I9_9STRA (rRNA-processing arch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I9_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.860e-72
Identity = 126/146 (86.30%), Postives = 129/146 (88.36%), Query Frame = 0
Query:    1 YSVYPADWKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            YSV PADW     Y    + AK YPFTLDPFQ QAI YIERNESVLVSAHTSAGKTV AEYAIAK LRDKQRVIYTSPIKALSNQK+RDLQEEFGDVGLMTGDITINP+AT LIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR
Sbjct:   93 YSVVPADWVAPP-YEAPPRPAKTYPFTLDPFQAQAISYIERNESVLVSAHTSAGKTVTAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLQEEFGDVGLMTGDITINPTATVLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 237          
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: D0NDS6_PHYIT (DEAD/DEAH box RNA helicase, putative n=21 Tax=Peronosporaceae TaxID=4777 RepID=D0NDS6_PHYIT)

HSP 1 Score: 240 bits (612), Expect = 3.870e-71
Identity = 124/147 (84.35%), Postives = 130/147 (88.44%), Query Frame = 0
Query:    1 YSVYPADWKPDTTYRPAAK-AAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            +SVYP D+    T   AAK  AK YPFTLDPFQ+QA+ YIE  ESVLVSAHTSAGKT  AEYAIAK LRDKQRVIYTSPIKALSNQK+RDL+EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR
Sbjct:  101 FSVYPPDYDAQPTAGAAAKNPAKTYPFTLDPFQQQAVDYIESGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 247          
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A484DS25_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DS25_BRELC)

HSP 1 Score: 240 bits (612), Expect = 4.260e-71
Identity = 124/147 (84.35%), Postives = 131/147 (89.12%), Query Frame = 0
Query:    1 YSVYPADWKPDTTYRPAAK-AAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            +SVYP D++   T   AAK  AK YPFTLDPFQ+QA+ YIE  ESVLVSAHTSAGKT  AEYAIAK LRDKQRVIYTSPIKALSNQK+RDL+EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR
Sbjct:   98 FSVYPPDYEVKPTADAAAKNPAKTYPFTLDPFQQQAVNYIEAGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 244          
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A367IX00_RHIST (ATP-dependent RNA helicase mtr4 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367IX00_RHIST)

HSP 1 Score: 222 bits (565), Expect = 4.280e-71
Identity = 107/139 (76.98%), Postives = 125/139 (89.93%), Query Frame = 0
Query:    8 WKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            ++P + + P A  A+ YPFTLDPFQ+ A+  IERNES+LV+AHTSAGKTV AEYAIA+CL++KQRVIYTSPIKALSNQKFR+  EEFGDVGLMTGD+TINP A+CL+MTTEILRSMLYRGSEV+REVAWV+YDEIHYMR
Sbjct:   89 YQPISQHVPPADPARVYPFTLDPFQRVAVSSIERNESILVAAHTSAGKTVVAEYAIAQCLKNKQRVIYTSPIKALSNQKFREFTEEFGDVGLMTGDVTINPQASCLVMTTEILRSMLYRGSEVIREVAWVVYDEIHYMR 227          
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A1E7FRB4_9STRA (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRB4_9STRA)

HSP 1 Score: 221 bits (562), Expect = 6.610e-71
Identity = 108/128 (84.38%), Postives = 118/128 (92.19%), Query Frame = 0
Query:   19 KAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            K AKEY FTLDPFQ QA+ YI++ ESVLV+AHTSAGKT  AEYAIAK L + QRV+YTSPIKALSNQKFRDLQEEFGDVGLMTGDITINP+ATCL+MTTEILRSMLYRGSE+MREVAWVIYDE+HYMR
Sbjct:    7 KPAKEYAFTLDPFQSQAVGYIDKEESVLVAAHTSAGKTAVAEYAIAKALNNGQRVVYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPTATCLVMTTEILRSMLYRGSELMREVAWVIYDEVHYMR 134          
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A3F2RHU6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RHU6_9STRA)

HSP 1 Score: 240 bits (613), Expect = 8.090e-71
Identity = 124/147 (84.35%), Postives = 131/147 (89.12%), Query Frame = 0
Query:    1 YSVYPADWKPDTTYRPAAK-AAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            +SVYP D++   T   AAK  AK YPFTLDPFQ+QA+ YIE  ESVLVSAHTSAGKT  AEYAIAK LRDKQRVIYTSPIKALSNQK+RDL+EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR
Sbjct:  112 FSVYPPDYEVKPTAGAAAKNPAKNYPFTLDPFQQQAVDYIEAGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 258          
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A7S1TVE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVE1_9STRA)

HSP 1 Score: 223 bits (569), Expect = 8.090e-71
Identity = 109/146 (74.66%), Postives = 126/146 (86.30%), Query Frame = 0
Query:    1 YSVYPADWKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 146
            +S YP D+  + + +     AK YPFTLDPFQ+ ++ YIE NESVLV+AHTSAGKTV AEYAIAK LRD QRV+YTSPIKALSNQKFRD+Q EF DVGLMTGDI+INP+A+CLIMTTEILRSMLYRGSE+MREVAWV+YDE+HYMR
Sbjct:   29 FSAYPKDYVREESPQDPRPPAKTYPFTLDPFQQASVNYIEDNESVLVAAHTSAGKTVMAEYAIAKSLRDGQRVVYTSPIKALSNQKFRDMQAEFDDVGLMTGDISINPNASCLIMTTEILRSMLYRGSEIMREVAWVVYDEVHYMR 174          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYM5_ECTSI1.640e-8997.95Superkiller viralicidic activity 2-like 2 (ATP-dep... [more]
A0A6A4CGB4_9STRA1.870e-7684.35ATP-dependent RNA helicase n=2 Tax=Phytophthora fr... [more]
A0A7S2V2R9_9STRA3.970e-7482.31Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A836C7I9_9STRA2.860e-7286.30rRNA-processing arch domain-containing protein n=1... [more]
D0NDS6_PHYIT3.870e-7184.35DEAD/DEAH box RNA helicase, putative n=21 Tax=Pero... [more]
A0A484DS25_BRELC4.260e-7184.35Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A367IX00_RHIST4.280e-7176.98ATP-dependent RNA helicase mtr4 (Fragment) n=1 Tax... [more]
A0A1E7FRB4_9STRA6.610e-7184.38p-loop containing nucleoside triphosphate hydrolas... [more]
A0A3F2RHU6_9STRA8.090e-7184.35Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A7S1TVE1_9STRA8.090e-7174.66Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 24..146
e-value: 0.0087
score: 16.0
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 36..146
score: 15.891
NoneNo IPR availableGENE3D3.40.50.300coord: 5..146
e-value: 1.5E-58
score: 199.2
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 11..146
NoneNo IPR availablePANTHERPTHR12131:SF7EXOSOME RNA HELICASE MTR4coord: 11..146
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 30..145
e-value: 1.4E-13
score: 51.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16612contigL-elsbetiae_contig16612:2651..3527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16612.4473.1mRNA_L-elsbetiae_contig16612.4473.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16612 2651..3527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16612.4473.1 ID=prot_L-elsbetiae_contig16612.4473.1|Name=mRNA_L-elsbetiae_contig16612.4473.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp
YSVYPADWKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAH
TSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLM
TGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase