mRNA_L-elsbetiae_contig16612.4473.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: D7FYM5_ECTSI (Superkiller viralicidic activity 2-like 2 (ATP-dependent helicase SKIV2L2) conserved hypothetical pr n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYM5_ECTSI) HSP 1 Score: 290 bits (741), Expect = 1.640e-89 Identity = 143/146 (97.95%), Postives = 144/146 (98.63%), Query Frame = 1 Query: 1 YSVYPADWKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 YSVYPADWKPDTTYRPA K AKEYPFTLDPFQKQAI+YIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR Sbjct: 86 YSVYPADWKPDTTYRPAPKPAKEYPFTLDPFQKQAIEYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 231
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A6A4CGB4_9STRA (ATP-dependent RNA helicase n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4CGB4_9STRA) HSP 1 Score: 240 bits (613), Expect = 1.870e-76 Identity = 124/147 (84.35%), Postives = 131/147 (89.12%), Query Frame = 1 Query: 1 YSVYPADWKPDTTYRPAAK-AAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 +SVYP D++ T AAK AK YPFTLDPFQ+QA+ YIE ESVLVSAHTSAGKT AEYAIAK LRDKQRVIYTSPIKALSNQK+RDL+EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR Sbjct: 73 FSVYPPDYEATPTAGAAAKNPAKTYPFTLDPFQQQAVDYIEAGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 219
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A7S2V2R9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2R9_9STRA) HSP 1 Score: 239 bits (610), Expect = 3.970e-74 Identity = 121/147 (82.31%), Postives = 129/147 (87.76%), Query Frame = 1 Query: 1 YSVYPADW-KPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 YS YP DW KPD T AK YPF LDPFQ+QA++ +ER ESVLV+AHTSAGKTV AEYAIAK LRDKQRVIYTSPIKALSNQKFRD+QEEF DVGLMTGDITINPSATCLIMTTEILRSMLYRG+E+MREVAWVIYDEIHYMR Sbjct: 23 YSAYPIDWVKPDYTEMDERAPAKSYPFKLDPFQQQAVRCVERGESVLVAAHTSAGKTVVAEYAIAKSLRDKQRVIYTSPIKALSNQKFRDMQEEFTDVGLMTGDITINPSATCLIMTTEILRSMLYRGNEIMREVAWVIYDEIHYMR 169
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A836C7I9_9STRA (rRNA-processing arch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I9_9STRA) HSP 1 Score: 243 bits (621), Expect = 2.860e-72 Identity = 126/146 (86.30%), Postives = 129/146 (88.36%), Query Frame = 1 Query: 1 YSVYPADWKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 YSV PADW Y + AK YPFTLDPFQ QAI YIERNESVLVSAHTSAGKTV AEYAIAK LRDKQRVIYTSPIKALSNQK+RDLQEEFGDVGLMTGDITINP+AT LIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR Sbjct: 93 YSVVPADWVAPP-YEAPPRPAKTYPFTLDPFQAQAISYIERNESVLVSAHTSAGKTVTAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLQEEFGDVGLMTGDITINPTATVLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 237
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: D0NDS6_PHYIT (DEAD/DEAH box RNA helicase, putative n=21 Tax=Peronosporaceae TaxID=4777 RepID=D0NDS6_PHYIT) HSP 1 Score: 240 bits (612), Expect = 3.870e-71 Identity = 124/147 (84.35%), Postives = 130/147 (88.44%), Query Frame = 1 Query: 1 YSVYPADWKPDTTYRPAAK-AAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 +SVYP D+ T AAK AK YPFTLDPFQ+QA+ YIE ESVLVSAHTSAGKT AEYAIAK LRDKQRVIYTSPIKALSNQK+RDL+EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR Sbjct: 101 FSVYPPDYDAQPTAGAAAKNPAKTYPFTLDPFQQQAVDYIESGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 247
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A484DS25_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DS25_BRELC) HSP 1 Score: 240 bits (612), Expect = 4.260e-71 Identity = 124/147 (84.35%), Postives = 131/147 (89.12%), Query Frame = 1 Query: 1 YSVYPADWKPDTTYRPAAK-AAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 +SVYP D++ T AAK AK YPFTLDPFQ+QA+ YIE ESVLVSAHTSAGKT AEYAIAK LRDKQRVIYTSPIKALSNQK+RDL+EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR Sbjct: 98 FSVYPPDYEVKPTADAAAKNPAKTYPFTLDPFQQQAVNYIEAGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 244
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A367IX00_RHIST (ATP-dependent RNA helicase mtr4 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367IX00_RHIST) HSP 1 Score: 222 bits (565), Expect = 4.280e-71 Identity = 107/139 (76.98%), Postives = 125/139 (89.93%), Query Frame = 1 Query: 22 WKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 ++P + + P A A+ YPFTLDPFQ+ A+ IERNES+LV+AHTSAGKTV AEYAIA+CL++KQRVIYTSPIKALSNQKFR+ EEFGDVGLMTGD+TINP A+CL+MTTEILRSMLYRGSEV+REVAWV+YDEIHYMR Sbjct: 89 YQPISQHVPPADPARVYPFTLDPFQRVAVSSIERNESILVAAHTSAGKTVVAEYAIAQCLKNKQRVIYTSPIKALSNQKFREFTEEFGDVGLMTGDVTINPQASCLVMTTEILRSMLYRGSEVIREVAWVVYDEIHYMR 227
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A1E7FRB4_9STRA (p-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRB4_9STRA) HSP 1 Score: 221 bits (562), Expect = 6.610e-71 Identity = 108/128 (84.38%), Postives = 118/128 (92.19%), Query Frame = 1 Query: 55 KAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 K AKEY FTLDPFQ QA+ YI++ ESVLV+AHTSAGKT AEYAIAK L + QRV+YTSPIKALSNQKFRDLQEEFGDVGLMTGDITINP+ATCL+MTTEILRSMLYRGSE+MREVAWVIYDE+HYMR Sbjct: 7 KPAKEYAFTLDPFQSQAVGYIDKEESVLVAAHTSAGKTAVAEYAIAKALNNGQRVVYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPTATCLVMTTEILRSMLYRGSELMREVAWVIYDEVHYMR 134
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A3F2RHU6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RHU6_9STRA) HSP 1 Score: 240 bits (613), Expect = 8.090e-71 Identity = 124/147 (84.35%), Postives = 131/147 (89.12%), Query Frame = 1 Query: 1 YSVYPADWKPDTTYRPAAK-AAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 +SVYP D++ T AAK AK YPFTLDPFQ+QA+ YIE ESVLVSAHTSAGKT AEYAIAK LRDKQRVIYTSPIKALSNQK+RDL+EEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR Sbjct: 112 FSVYPPDYEVKPTAGAAAKNPAKNYPFTLDPFQQQAVDYIEAGESVLVSAHTSAGKTAVAEYAIAKSLRDKQRVIYTSPIKALSNQKYRDLEEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 258
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Match: A0A7S1TVE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVE1_9STRA) HSP 1 Score: 223 bits (569), Expect = 8.090e-71 Identity = 109/146 (74.66%), Postives = 126/146 (86.30%), Query Frame = 1 Query: 1 YSVYPADWKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHTSAGKTVNAEYAIAKCLRDKQRVIYTSPIKALSNQKFRDLQEEFGDVGLMTGDITINPSATCLIMTTEILRSMLYRGSEVMREVAWVIYDEIHYMR 438 +S YP D+ + + + AK YPFTLDPFQ+ ++ YIE NESVLV+AHTSAGKTV AEYAIAK LRD QRV+YTSPIKALSNQKFRD+Q EF DVGLMTGDI+INP+A+CLIMTTEILRSMLYRGSE+MREVAWV+YDE+HYMR Sbjct: 29 FSAYPKDYVREESPQDPRPPAKTYPFTLDPFQQASVNYIEDNESVLVAAHTSAGKTVMAEYAIAKSLRDGQRVVYTSPIKALSNQKFRDMQAEFDDVGLMTGDISINPNASCLIMTTEILRSMLYRGSEIMREVAWVVYDEVHYMR 174 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16612.4473.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16612.4473.1 >prot_L-elsbetiae_contig16612.4473.1 ID=prot_L-elsbetiae_contig16612.4473.1|Name=mRNA_L-elsbetiae_contig16612.4473.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=146bp YSVYPADWKPDTTYRPAAKAAKEYPFTLDPFQKQAIQYIERNESVLVSAHback to top mRNA from alignment at L-elsbetiae_contig16612:2651..3527+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16612.4473.1 ID=mRNA_L-elsbetiae_contig16612.4473.1|Name=mRNA_L-elsbetiae_contig16612.4473.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=877bp|location=Sequence derived from alignment at L-elsbetiae_contig16612:2651..3527+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16612:2651..3527+ >mRNA_L-elsbetiae_contig16612.4473.1 ID=mRNA_L-elsbetiae_contig16612.4473.1|Name=mRNA_L-elsbetiae_contig16612.4473.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=876bp|location=Sequence derived from alignment at L-elsbetiae_contig16612:2651..3527+ (Laminarionema elsbetiae ELsaHSoW15)back to top |