prot_L-elsbetiae_contig1660.4465.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1660.4465.1
Unique Nameprot_L-elsbetiae_contig1660.4465.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length286
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1660.4465.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 214..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..73
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..257
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..38
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..155
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 258..285
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..95
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..174
NoneNo IPR availableTMHMMTMhelixcoord: 73..95
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 236..258
NoneNo IPR availableTMHMMTMhelixcoord: 2..19
NoneNo IPR availableTMHMMTMhelixcoord: 187..209
NoneNo IPR availableTMHMMTMhelixcoord: 152..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1660contigL-elsbetiae_contig1660:15589..17821 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1660.4465.1mRNA_L-elsbetiae_contig1660.4465.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1660 15372..18744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1660.4465.1 ID=prot_L-elsbetiae_contig1660.4465.1|Name=mRNA_L-elsbetiae_contig1660.4465.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=286bp
MIAYAVFQLGAAVLAYFVVEEWEDLVNAEDDNGITFIEFGLTFWIVVAGL
IPALFTSMFLLVKARHAGDGPFYGAGRLWVTSGFAWVVWALAVTATAHDG
WLLLHIGDAPTFDGGVGPGGLDALENCEIIGEIEFDGANEFNLACDYYRG
FSATQFAATITCSVVVALLALAAFRPAVARCASVKSLAIAGGIILIVYVV
LQLGAAVLAHFLAKEWERIYNEVLQDETIFELEFGPTFWMSVAGLVLAVI
VSCNLFANAKHAEDGPFYGGTCGVKDGEGNRHGNV*
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