prot_L-elsbetiae_contig1660.4464.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1660.4464.1
Unique Nameprot_L-elsbetiae_contig1660.4464.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length432
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1660.4464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.140.150coord: 31..213
e-value: 9.9E-6
score: 27.0
coord: 218..410
e-value: 5.4E-6
score: 27.8
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 357..383
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 240..295
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..204
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 296..317
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..127
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 166..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 404..431
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 205..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 318..328
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 216..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 329..356
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 384..403
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..138
NoneNo IPR availableTMHMMTMhelixcoord: 37..59
NoneNo IPR availableTMHMMTMhelixcoord: 330..352
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 295..317
NoneNo IPR availableTMHMMTMhelixcoord: 105..127
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 182..204
NoneNo IPR availableTMHMMTMhelixcoord: 382..404

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1660contigL-elsbetiae_contig1660:6371..11118 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1660.4464.1mRNA_L-elsbetiae_contig1660.4464.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1660 6155..12498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1660.4464.1 ID=prot_L-elsbetiae_contig1660.4464.1|Name=mRNA_L-elsbetiae_contig1660.4464.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=432bp
MAQPSSSWAPPAQQEISSTTSQHRQEVSSNGTHRQRIYFWVAAGFAWAVW
ALAVTAAGHDKWLRTRSEDDDVRFGAGNDSLLYFCEENIFNDEFDHFCDL
YRGFSATQFAATVTCSIAVALLALAAFRPAVAGCASAKSLAIAGGVLMIV
YAMVQLGAAMLAYFVERELEHIFDDFLRVELQLTFWVGVAGLVLALFTSM
CLLAKVKHAGEGPLYGVGRLWIASGFAWVVWALAVTAAAHDEWLLLQVGD
VPVLDAGVGPGGLDALENCEIFDEVEYDDATNDFKLLCDYYRGFSAMQFA
ATATCSIAVALLALAAFRPAVARCASVKPLAIAGGVLLIVYAMVQLGAAV
LAHFLAKEWERIYNGFFRDDDPTFQFELEFGPTFWMGVVGLVLAVIVACG
LFASPKDAEDGPFHGGTCGVKDRDNATHGNA*
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