mRNA_L-elsbetiae_contig16400.4353.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: UPI00064FAE88 (SAVED domain-containing protein n=1 Tax=Methanobacterium TaxID=2160 RepID=UPI00064FAE88) HSP 1 Score: 149 bits (376), Expect = 1.990e-40 Identity = 93/259 (35.91%), Postives = 138/259 (53.28%), Query Frame = 1 Query: 1 LTRQNFDQHWLQERPVDATHTDIACSMFVDTQDG-RDAVLPHLAQAILDHHFHRRRIAAL--VRQLGHTEAAQYFASHLPKDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEAGSISRVIIGEAKCIVQYRKATVRSAHRRLADAVRPRPMTLSLLAEILYTEGRD---DLASEIDRVSLLFLEEDFPCQNWIVLINQNQPEDPFSFLEDEDVELVTGLHCVGVSLSELSTLVDFTYD 759 + R NFD W + P A V+ DG R+ + L +AI+DHH +I + ++ LG+ A +PK + T+KGNFGE+++SEHL QRY Y+MPVFKLR + + M GEDI+AF + I + IGEAK + +Y TV AH RL RP +LSL+ YT +D LA E+ ++ + FP NWI +I N+P DPF + + E+V L + + L +L+ +D ++ Sbjct: 7 IKRNNFDNFWFECHPNPKFKKFNAIR--VNEIDGMREDIKKALVEAIIDHHITPEKIDSREELKDLGYDITADLILD-IPKSSRTKKGNFGEIISSEHLCQRYNYEMPVFKLRHSANPNVPMPGEDILAFNIVNDEIKTLCIGEAKVLTRYNSRTVNEAHERLDYTYEVRPTSLSLV----YTALKDVDKKLAFELLKLMGTLGKHSFPRHNWIFIITDNKPRDPFKPISERS-EIVENLSVISIHLPDLNKFIDEIFE 257
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: A0A497IMH2_9EURY (Uncharacterized protein (Fragment) n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A497IMH2_9EURY) HSP 1 Score: 122 bits (305), Expect = 8.360e-30 Identity = 80/262 (30.53%), Postives = 141/262 (53.82%), Query Frame = 1 Query: 1 LTRQNFDQHWLQERPVDA----THTDIACSMFVDTQDGRDAVLPHLAQAILDHHFHRRRIAALVRQLGHTEAAQYFASHLPKDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEA--GSISRVIIGEAKCIVQYRKATVRSAHRRLA---DAVRPRPMTLSLLAEILYTEGRDDLASEIDRVSLLFLEEDFPCQNWIVLINQNQPEDPFSFLEDEDVELVTGLHCVGVSLSELSTLVDFTYD 759 +T +F HWL + P + TH ++ V+ R+ +L LA+ I HH ++ LG+ EAA+ P D N RKGNFGEV+ASE+L Q+ GY +PV++LR+ + + G+D++AF++++ GS + I E K ++ V+ A+ ++ + +RPRP +L + IL +DD+A E+ + F ++ I LI N+P DPF+ +E + + V L + ++L++L+ V+ ++ Sbjct: 16 VTTNDFIIHWLVDSPSNNYRKFTHLEL-----VEKDGAREDILEPLAKVIFIHHNDPEEFKQNLQYLGYPEAAKEL-DRRPGDENIRKGNFGEVLASEYLKQKEGYLIPVYRLRYSQHPDASPPGDDVLAFKLDSQKGSKKEICITEVKVRNRFGSDAVKEAYEKIDKSYNGLRPRPKSLLFVIHILRKGKKDDIADELLNLLDRTRGNPFNIRHIIFLITGNKPRDPFNVIESIE-KPVRNLTAMNLTLNDLAEFVNTVFE 270
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: A0A8I0B493_9DELT (DUF1837 domain-containing protein n=1 Tax=Desulfomicrobiaceae bacterium TaxID=2053547 RepID=A0A8I0B493_9DELT) HSP 1 Score: 96.3 bits (238), Expect = 3.440e-20 Identity = 56/192 (29.17%), Postives = 98/192 (51.04%), Query Frame = 1 Query: 13 NFDQHWLQERPVDATHTDIACSMFVDTQDGRDAVLPHLAQAILDHHFHRRRIAALVRQLGHTEAAQYFASHLPKDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEAGSISRVIIGEAKCIVQYRKATVRSAHRRL-ADAVRPRPMTLSLLAEILYTEGRDDLASEIDRVSL 585 +F WL+ R D T + + RDA+L L + H+ +AA + QLG + A+ HLP +R G+ GE++A+E + ++ Y++P+ +LR++D E+A+RG+D++AF + + GEAK + V+ A L D RP ++ +AE L +G D++A ++ L Sbjct: 13 DFFDEWLEVR--DWTIRRHRKILLREKDGARDAILDDLRNVVRSHYVSPETMAARIEQLGADKTAELLREHLPTKKGSRSGDLGEILATEFVTRKLAYEVPILRLRWKDGREMALRGDDVVAFRRDEDDRLSFLKGEAKSRARLTPDIVQQAANALDQDHGRPGRHSVLFVAERLREQGADEMAVLLENAVL 202
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: N1MGN0_9SPHN (Uncharacterized protein n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=N1MGN0_9SPHN) HSP 1 Score: 93.2 bits (230), Expect = 2.620e-19 Identity = 52/155 (33.55%), Postives = 85/155 (54.84%), Query Frame = 1 Query: 124 LAQAILDHHFHRRRIAALVRQLGHTEAAQYFASHLPKDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEAGSISRVIIGEAKCIVQYRKATVRSAHRRLADAV-RPRPMTLSLLAEILYTEGRDDLASEIDRVSL 585 +A + H+ RI ++R+LG + A Y + LP+ +R G+ GE++A+ ++ + GY + VFKLR+ D E+AMRG+DI+ ++ G + + GE K K TV A LA + RP P L+ +A+ L+ G LA ID+ + Sbjct: 8 VAAVVPGHYAAPDRIGDILRRLGKSAVADYIQTKLPQGAKSRSGDLGEILAASYVSEFTGYSVGVFKLRWSDHREMAMRGDDILGIRLDPGVTVKFLKGEVKSRAALGKKTVDEARTALASSNGRPTPHALAFVADRLFETGETALAEVIDQFQI 162
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: A0A1E5XUY6_9HYPH (Uncharacterized protein n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1E5XUY6_9HYPH) HSP 1 Score: 93.2 bits (230), Expect = 4.610e-19 Identity = 57/167 (34.13%), Postives = 91/167 (54.49%), Query Frame = 1 Query: 94 QDGRDAVLPHLAQAILDHHFHRRRIAALVRQLGHTEAAQYFASHLPKDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEAGSIS-RVIIGEAKCIVQYRKATVRSAHRRLADAV-RPRPMTLSLLAEILYTEGRDDLASEIDRVSLL 588 ++ DAV A+A+ H+ + R+A ++++LG AA++ LP+ R G+ GE++ S ++ + YD + KLR++D E+AMRG+D+IAF+ G R + GE K A + A L + RP P L +A+ L+ EG D+LA ID LL Sbjct: 30 EEAGDAV----AKAVPSHYASQDRVAGILKRLGKKAAARFIKEKLPESKKIRSGDLGEILGSSYVNEATSYDTGINKLRWKDHREMAMRGDDLIAFQPVDGPDKIRFLKGEVKSAKTMTAAILGKARTALKKSYSRPSPHALQFIADRLHDEGDDELADLIDDAVLL 192
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: A0A6I6L7L5_9SPHN (DUF1837 domain-containing protein n=2 Tax=Sphingorhabdus lacus TaxID=392610 RepID=A0A6I6L7L5_9SPHN) HSP 1 Score: 91.7 bits (226), Expect = 1.050e-18 Identity = 52/155 (33.55%), Postives = 83/155 (53.55%), Query Frame = 1 Query: 124 LAQAILDHHFHRRRIAALVRQLGHTEAAQYFASHLPKDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEAGSISRVIIGEAKCIVQYRKATVRSAHRRLADAV-RPRPMTLSLLAEILYTEGRDDLASEIDRVSL 585 LA A+ +H+ RIA ++ LG A+Y + LP +R G+ GE++AS ++ + GY + V+KLR+ D E+AMRG+DI+ ++ + + GE K K TV A L + RP P L+ +A+ L+ G L+ ID+ L Sbjct: 11 LAAAVSNHYAAPDRIAQILHMLGKPAVAEYIKTKLPYGAKSRSGDLGEILASSYVSEYTGYSVGVYKLRWSDHREMAMRGDDILGIRLDPSVTVKFLKGEVKSRAALGKKTVDEARTALGSSNGRPTPHALAFVADRLFETGETALSEVIDQFQL 165
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: A0A433BT24_9BURK (DUF1837 domain-containing protein n=1 Tax=Curvibacter sp. TaxID=1888168 RepID=A0A433BT24_9BURK) HSP 1 Score: 89.0 bits (219), Expect = 1.590e-17 Identity = 50/155 (32.26%), Postives = 84/155 (54.19%), Query Frame = 1 Query: 124 LAQAILDHHFHRRRIAALVRQLGHTEAAQYFASHLPKDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEAGSISRVIIGEAKCIVQYRKATVRSAHRRL-ADAVRPRPMTLSLLAEILYTEGRDDLASEIDRVSL 585 +A+ I DH+ +R+A L+ +LG A Y LP + R G+ GE++ S ++ + + + V +LR +D +AMRGED++AFE++AG+ +V+ E+K A ++ A L A P P +S +A++L +G L ID L Sbjct: 37 VAKVIPDHYVAPQRVADLLTRLGRGAVAAYVTEKLPTGKSIRSGDLGEILCSTYVYENTTFKLAVKRLRRKDHRNMAMRGEDLLAFELQAGTPLKVLKAESKSRAAMSSAVLKEARESLSAFGELPSPHAMSFVADMLNDQGDKPLRDAIDDAQL 191
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: UPI001F0EBFC4 (DUF1837 domain-containing protein n=1 Tax=Novosphingobium sp. ERN07 TaxID=2726187 RepID=UPI001F0EBFC4) HSP 1 Score: 86.7 bits (213), Expect = 4.450e-17 Identity = 51/163 (31.29%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 178 VRQLGHTEAAQYFASHLPKDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEAGSISRVIIGEAKCIVQYRKATVRSAHRRLADAV-RPRPMTLSLLAEILYTEGRDDLASEIDRVSLLFLEEDFPCQNWIVLINQNQPEDPFS 663 +++LG A Y + LP+ +R G+ GE++A+ ++ + GY + VFKLR+ D E+AMRG+DI+ +++ G + + GE K K TV A LA + RP P L+ +A+ L+ G +A ID+ L E + + + N P + S Sbjct: 1 MQRLGKPAVAHYVQTKLPQGAKSRSGDLGEILATSYVSEFTGYSIGVFKLRWSDHREMAMRGDDILGIKLDPGVTVKFLKGEVKSRAALGKKTVDEARTALASSNGRPTPHALAFVADRLFETGETAVAEVIDQFQLKARIEINQLSHLMFMFTGNNPSNLLS 163
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: A0A245ZHM3_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas dokdonensis TaxID=344880 RepID=A0A245ZHM3_9SPHN) HSP 1 Score: 87.0 bits (214), Expect = 8.940e-17 Identity = 49/155 (31.61%), Postives = 83/155 (53.55%), Query Frame = 1 Query: 124 LAQAILDHHFHRRRIAALVRQLGHTEAAQYFASHLPKDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEAGSISRVIIGEAKCIVQYRKATVRSAHRRL-ADAVRPRPMTLSLLAEILYTEGRDDLASEIDRVSL 585 +A + H+ R+A ++++LG A+Y + LP+ +R G+ GE++A+ + GY + VFKLR+ D E+AMRG+DI+ ++ + + GE K AT+ A L A RP P L+ +A+ L+ G LA+ +D+ L Sbjct: 37 VAAVVPSHYAAPDRVADILQRLGKPAVAEYVRTKLPEGARSRSGDLGEILATSFVTDYTGYKVGVFKLRWADHREMAMRGDDILGIRLDTKLTVKFLKGEVKSRATLGSATIDEARAALNATHGRPTPHALAFVADRLFETGDTALAAVVDQYQL 191
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Match: UPI00112154D6 (SAVED domain-containing protein n=1 Tax=Vibrio parahaemolyticus TaxID=670 RepID=UPI00112154D6) HSP 1 Score: 82.4 bits (202), Expect = 5.960e-15 Identity = 54/167 (32.34%), Postives = 95/167 (56.89%), Query Frame = 1 Query: 103 RDAVLPHLAQAILDHHFHRRRIAALVRQ---LGHTEAAQYFASHLP---KDNNTRKGNFGEVVASEHLVQRYGYDMPVFKLRFRDSHELAMRGEDIIAFEMEAGSISRVIIGEAKCIVQYRKATVRSAHRRLADAVRPR--PMTLSLLAEILYTEGRDDLASEIDRV 579 R +++ HL+Q I+ HH RIA + R+ L QY +P K T+KGN GE++ +E+LV+ G ++ V+KLR+ + E +M+G+D++ F+ + +RVI+GEAK +R + A + +++ P++L+ +++ L G D LA EID + Sbjct: 50 RASLVDHLSQWIIKHHASEARIARIERKKQILAKHGFNQYMEGKIPFPIKSATTQKGNLGEIILAEYLVETSGLEILVYKLRYNPNVEQSMKGDDLLLFDKQNVQ-NRVIMGEAK----FRTTKSKKALNDIVESLSNNNLPISLTFISDRLEEMGDDLLADEIDNL 211 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16400.4353.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16400.4353.1 >prot_L-elsbetiae_contig16400.4353.1 ID=prot_L-elsbetiae_contig16400.4353.1|Name=mRNA_L-elsbetiae_contig16400.4353.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=253bp LTRQNFDQHWLQERPVDATHTDIACSMFVDTQDGRDAVLPHLAQAILDHHback to top mRNA from alignment at L-elsbetiae_contig16400:1463..2221+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16400.4353.1 ID=mRNA_L-elsbetiae_contig16400.4353.1|Name=mRNA_L-elsbetiae_contig16400.4353.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=759bp|location=Sequence derived from alignment at L-elsbetiae_contig16400:1463..2221+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16400:1463..2221+ >mRNA_L-elsbetiae_contig16400.4353.1 ID=mRNA_L-elsbetiae_contig16400.4353.1|Name=mRNA_L-elsbetiae_contig16400.4353.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1518bp|location=Sequence derived from alignment at L-elsbetiae_contig16400:1463..2221+ (Laminarionema elsbetiae ELsaHSoW15)back to top |