mRNA_L-elsbetiae_contig1636.4328.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1636.4328.1 vs. uniprot
Match: D7FQQ9_ECTSI (C-type lectin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ9_ECTSI) HSP 1 Score: 1648 bits (4267), Expect = 0.000e+0 Identity = 872/1275 (68.39%), Postives = 1009/1275 (79.14%), Query Frame = 1
Query: 178 RHVLPEADVGHFKLSVTRNGVSFITSCISYGAPAIAVASALDALDPVADLGGSTVVRQGDGLSSTYDYGFVYYVSASDSSQNLVNSIGIELAGSGVEYGCARLSTLGYWEDESNWDAGGVPASADQVTIPTDSGFVVLTADITVSSLEISGGALVTHDSTCLSGWTPAPGGTSSSFGSKKCYRLFDNASSWAAAQSACARSVSRQQTGLPRSGALRGALVTVQDQEENNWVSRMCRADLLERDCWVGMARSYGDGNDVEMGDDLEWAELGQIVGESRYRSWAVREPSNFRSDEAGENCVAIRGSKRRAADQGQARWYDDECDSEKPFVCQAFGISNPFSLTVSTELQLAGGYIVGSGTIISSTLAQVTGNEGQVGILNGATLLNAAFGSMEWSAPSTVGWGGTLRNVGVLSFSGATVSLGAAEDKAGLLAANAGPWPTIVNEEGAQVVFEEDSGVNLEWLLWNEGGSVAVRGALNCTGGGYSSSGTLAVDEGGEARFSDSSFIMHQSEVVVISLQSDREVSGQDVETSAKAGGYYRLAFGGEQTSCIGYHATEENVQEALEQMPSVEEEGGVTVRRDGSGKLKLWNYGYRYVVTFDGARRLSAG-NALALSCAGSANDCGCIDVTGAISGPRA--VGCGEA--GSAEDITSTSAEFDSSACRVQAVVKLETLREGGETVVGGGGILSFSDGGQYFLPSAVAADVEVMSAAEVVCPQWAAELVGAVNISSGGMLWFAGADWDALDAVQLLHSDPHTPGRAGGAIASPPAFSATVTGDVNVQSNGEIRLAA-TQSAALTVIGPLTLAGGGLSGQGRIQVEGSTLIVASGVSSDGGVDVDEASSLKNGVTLDMFGGGVWSGGGLQARDGVSVVNRGQLFLSADRGTWFGHGGDFGANKALDFDGERWYANPLCGESCMVEPWWENREGGEVVGTESSDALLGFVLYNEGTVQVENGGRLEWHAVGQGGGNGSMVLPGANSTNVFSNGGFVFGANAVLTGEGVLEFSGGTGHEVLKDTNETVPPLVKVSGRAVVTFAGVNLSFGRGLTVVDNGAIVFSSSTSSMSISGDLTLTDDGLIAFPPPSVHASLVLAGGAEVEAEAPWGPXXXXXXXXXXXXSASRSSLGVEGKFVWGGGTISGNARVICAGESEW--------STFFQAASTKKLLNSLHLVSRGAIVWSAGDVIVSLGAAFVNQGTLLLFEQAGAEDDFSLDLAPRIRGPRKGEEAGLSRVFSSATVEALVDG---ASVVAMGGAGSTGGG--QWAWEELSY 3945
R+V+P AD GHFKLS+TR+G + TSC+ YGA A AVA+ALDALDP+ DLGGSTVVR+GDG S Y+YGFVY++ AS+SS+NLVNS+ I++ GSGV++GCARLSTLGYWEDE NWD G VP+S D+VTIPTD+GFVVLTAD + +L ++GGALVTHDSTCL GWTPAPGGTSSSFGSKKCYR FD+ASSWAAAQSACA +VS+ Q G R G+LRGALVTVQ EENNWV+RMCR D LERDCWVGM RSY +E GDDLEWAEL + GESRYRSWA REPS+F +DEAGE+CVA +GS++RAADQG+ARWYDDEC++EKPFVCQAFGIS PFSL+VSTEL++AGGYIVG+GT+ SSTLAQV+G+ G+VGILNGAT+LN+ GSM+WSA GWGG+L N G L+FSG T+ L AAED G LA NAG WP +VNEEG +VVFE S V+LEWLLWNEGGSV V G L+ TGGGYSSSGT V+ GGEARFSDSS IMHQSEVVV++LQ+DREV+GQDVET A GYYRLAFGGE+TSCIGYHA+EE V+EALE+M S++EEGGVTVRRDG GKL+ W YGYRYVVTFDG R LS G N LALSCAGSA+DCGC+D++G I G VGCG A S++D STSAEFDSS CRVQ V+LETL+EGGETVV GGG+L+F++GGQYFLPSAV ADVEVMS AEVVCP AAELVGAVN+SSGG+LWFAGA W+ALDAV LLHSDP TPGR+G A+ASPP F+AT+ GDVNVQ + E+RLAA T +A + V+G LTLAGGGLSG+GRI VEGSTL+VAS G + D+ASSL+NG+TLDM+GGG WSGGGL+ARDGV+VVNRG L SA G WFG GGDFGA LDFDGE+WY NPLCG+ C VEP ENR+GGE++G E S+ +LGFVL+NEGTV+VE+ GRLEW GQGGGNG++ LPG NST VFS GGFVFG ++ + GEGVLEFS GTGHE+ K E V PLVKVSG VVTFAG L GRG+TV D G +VFSS TSS ISG+ TL DDGLI FP PSV ASLV AGG V+AEAPWG +ASRSS+ VEG FVW GG ISGNARV+CAG SEW S+ FQA +TK +LNSLHLVSRG +VWS NQGTLLL E+ EDD DL RIR +KGE G FSS T+EA++DG A VA GGAGS GGG WAWEELSY
Sbjct: 22 RYVIP-ADEGHFKLSITRDGAGYNTSCLFYGASATAVAAALDALDPIDDLGGSTVVREGDGASPEYNYGFVYHIVASNSSENLVNSVDIDVVGSGVQHGCARLSTLGYWEDELNWDTGVVPSSTDEVTIPTDAGFVVLTADTAIDTLRVNGGALVTHDSTCLPGWTPAPGGTSSSFGSKKCYRFFDHASSWAAAQSACASAVSQLQPGPARGGSLRGALVTVQGLEENNWVARMCRGDSLERDCWVGMTRSYRGAGRIETGDDLEWAELENVAGESRYRSWATREPSDFENDEAGEHCVATQGSRKRAADQGEARWYDDECEAEKPFVCQAFGISTPFSLSVSTELEMAGGYIVGAGTVTSSTLAQVSGDNGEVGILNGATVLNS--GSMDWSAAEACGWGGSLHNTGTLTFSG-TILLEAAEDGEGFLADNAGAWPAVVNEEGGEVVFEAGSEVDLEWLLWNEGGSVVVEGELDSTGGGYSSSGTWTVEVGGEARFSDSSLIMHQSEVVVVTLQADREVTGQDVETFAGRAGYYRLAFGGEETSCIGYHASEETVEEALEEMSSIDEEGGVTVRRDGDGKLERWQYGYRYVVTFDGTRALSGGSNTLALSCAGSADDCGCVDISGGIEGTGGSRVGCGAAIFDSSDDRASTSAEFDSSTCRVQGTVELETLKEGGETVVSGGGVLAFANGGQYFLPSAVTADVEVMSGAEVVCPHSAAELVGAVNVSSGGVLWFAGAGWEALDAVSLLHSDPDTPGRSGSAVASPPGFNATIDGDVNVQGDAEVRLAAATPAATVVVLGSLTLAGGGLSGRGRISVEGSTLVVASA-----GDEEDDASSLRNGLTLDMYGGGEWSGGGLKARDGVTVVNRGLLEASAAGGIWFGKGGDFGARAPLDFDGEQWYENPLCGDGCTVEPSCENRDGGEILGVEGSNVVLGFVLHNEGTVRVEDHGRLEWCGEGQGGGNGTVDLPGMNSTLVFSAGGFVFGGSSSVAGEGVLEFSAGTGHELPKGGQE-VSPLVKVSGHGVVTFAGTYLLLGRGVTVADKGVLVFSSVTSSTLISGEATLMDDGLIIFPLPSVLASLVDAGGGSVDAEAPWGSGEGDQDGGAGWGAASRSSVTVEGTFVWMGGAISGNARVVCAGGSEWTDGNGGGGSSAFQA-TTKHILNSLHLVSRGDVVWSTXXXXXXXXXXXXNQGTLLLLEET--EDDDGDDLPSRIRASQKGERPGWRDGFSSGTLEAMLDGGGSADAVATGGAGSAGGGAANWAWEELSY 1283
BLAST of mRNA_L-elsbetiae_contig1636.4328.1 vs. uniprot
Match: A0A6H5JX22_9PHAE (C-type lectin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX22_9PHAE) HSP 1 Score: 806 bits (2082), Expect = 2.990e-277 Identity = 432/623 (69.34%), Postives = 494/623 (79.29%), Query Frame = 1
Query: 538 PASADQVTIPTDSGFVVLTADITVSSLEISGGALVTHDSTCLSGWTPAPGGTSSSFGSKKCYRLFDNASSWAAAQSACARSVSRQQTGLPRSGALRGALVTVQDQEENNWVSRMCRADLLERDCWVGMARSYGDGNDVEMGDDLEWAELGQIVGESRYRSWAVREPSNFRSDEAGENCVAIRGSKRRAADQGQARWYDDECDSEKPFVCQAFGISNPFSLTVSTELQLAGGYIVGSGTIISSTLAQVTGNEGQVGILNGATLLNAAFGSMEWSAPSTVGWGGTLRNVGVLSFSGATVSLGAAEDKAGLLAANAGPWPTIVNEEGAQVVFEEDSGVNLEWLLWNEGGSVAVRGALNCTGGGYSSSGTLAVDEGGEARFSDSSFIMHQSEVVVISLQSDREVSGQDVETSAKAGGYYRLAFGGEQTSCIGY------HATEENVQEALEQMPSVEEEGGVTVRRDGSGKLKLWNYGYRYVVTFDGARRLSAG-NALALSCAGSANDCGCIDVTGAISGPRA--VGCGEA--GSAEDITSTSAEFDSSACRVQAVVKLETLREGGETVVGGGGILSFSDGGQYFLPSAVAADVEVMSAAEVVCPQWAAELVGAVNISSGGMLWFAG 2373
P + QVTIPTD+GFVVLTAD + +L I+GGALVTHDSTCL GWTPAPGGTSSSFGSKKCYR FD ASSW AAQSACAR+VS+ Q GL R GALRGALVTVQ ENNWV+RMCR D ERDCWVGM RSY +E GDDLEWAEL + GE RYRSWA REPS+F +DEAGENCVAI+GS++RAADQG+ARWYDD C++EKPFVCQAFGIS PFSL+VSTEL++AGGYIVG+GT+ SSTLA+V+G+ G+VGILNGATLLN+ GSM+WSA GWGG+L N G L+FSGA + L AAED G L+ NAG WP +VN+EGA+VVFE S V+LEWLLWNEGGSV V G L+ TGGGYSSSGT V+ GGEARFSDSS IMHQSEVVV++LQ+DRE V TS Q S I + H E QEALE+M S++EEGGVTVRRDG+GKLK W YGYRYVVTFDG R LS G N LALSCAGSA+DCGC+D++GAI G + VGCG A S++D STSAEFDSS CRVQ V+LETL+EGGETV+ GGG+L F++GGQYFLPSAV ADVEVMS AEVVCP AAELVGAVN+SSGG+LWFAG
Sbjct: 11 PNHSRQVTIPTDAGFVVLTADTAIDTLRINGGALVTHDSTCLPGWTPAPGGTSSSFGSKKCYRFFDRASSWPAAQSACARAVSQLQAGLSRGGALRGALVTVQGLGENNWVARMCRGDSQERDCWVGMTRSYRGAGRIETGDDLEWAELENVAGELRYRSWATREPSDFENDEAGENCVAIQGSRKRAADQGEARWYDDGCEAEKPFVCQAFGISTPFSLSVSTELEMAGGYIVGAGTVTSSTLAKVSGDNGEVGILNGATLLNS--GSMDWSAAEACGWGGSLHNTGTLTFSGA-ILLEAAEDGEGFLSDNAGAWPAVVNDEGAEVVFEAGSEVDLEWLLWNEGGSVLVEGELDSTGGGYSSSGTWTVEVGGEARFSDSSLIMHQSEVVVVTLQADRE-GLWGVSTS--------------QPSAIPHATPPPPHVLE---QEALEEMSSIDEEGGVTVRRDGNGKLKRWQYGYRYVVTFDGTRALSGGSNTLALSCAGSADDCGCVDISGAIEGTGSSRVGCGAAIFDSSDDGASTSAEFDSSTCRVQGTVELETLKEGGETVISGGGVLVFANGGQYFLPSAVTADVEVMSGAEVVCPNSAAELVGAVNVSSGGVLWFAG 612
BLAST of mRNA_L-elsbetiae_contig1636.4328.1 vs. uniprot
Match: A0A7S3HNV4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNV4_9STRA) HSP 1 Score: 203 bits (516), Expect = 3.920e-49 Identity = 304/1202 (25.29%), Postives = 466/1202 (38.77%), Query Frame = 1
Query: 475 CARLSTLGYWEDESNWDAGGVPASADQVTIPTDSGFVVLTADITVSSLEISGGALVTHDSTCLSGWTPAPGGTSSSFGSKKCYRLFDNASSWAAAQSACARSVSRQQTGLPRSGALRGALVTVQDQEENNWVSRMCRA----DLLERDCWVGMARSYGDGNDVEMGDDLEWAELGQI-------VGESRYRSWAVREPSNFRSDEA-----GENCVAIRGSKRRAADQGQARWYDDECDSEKPFVCQAFGISNPFSLTVS-----TELQLAGGYIV-GSG-------TIISSTLAQV-TGNE----GQVGILNGATL---LNA-AFGSMEWSAPSTVGWGGTLRN-----------VGVLSFSGATVSLGAAEDKAGL-LAANAGPWPTIVNEEGAQVVFEEDSGVNLEWLLWNEGGSVAVRGALNCTGGGYSSSGTLAVDEGGEARFSDSSFIMHQSEVVVISLQS-DREVSGQDVETSAKAGGYYRLAFGGEQTSCIGYHATEENVQEALEQMPSVEEEGGVTVRRDGSGKLKLWNYGYRYVVTFDGARRLSAGN---ALALSCAGSANDCGCIDVTGAISGPRAVGCGEAGSAEDITSTSAEFDSSACRVQAVVKLETLREGGETVVGGGGILSFSDGGQYFLPS-----AVAADVEVMSAAEVVCPQWAAELVGAVNISSGGMLWFAGADWDALDAVQLLHSDPHTPGRAGGAIASPPAFSATVTGDVNVQSNGEIRLAATQSAALTVIGPLTLAGGGL-------------SG--QGRIQVEGSTLIVASGVSSDGGVDVDEASSLKNGVTLDMFGGGV--WSGGGLQARDGVSVVNRGQL------------------------------FLSADRGT-WFGHGGDFGANKALDFDGERWYANPLCGESCMVEPWWENREGGEVVGTESSDAL--LGFVLYNEGTVQVENGGRLEWHAVGQGG--GNGSMVLPGANSTNVFSNGGFVFGANAVLTGEGVLEFSGGTGHEVLKDTNETVPPLVKVSGRAVV----TFAGVNLSFGRGLTVVDNGAIVFSSSTSSMSISGDLTLTDDGLIAFPPPSVHASLVLAGGAEVEAEAPWGPXXXXXXXXXXXXSASRSSLGVEGKFVWGGGTISGNARVICAGESEWSTFFQAASTKKLLNSLHLVSRGAIVWSAGDVIVSLGAAFVNQGTL 3735
CA T+G W+D WD VP S +VTIP D+G + L+ D++V+SL + GG ++ +D+ C GW+ PG +S KCY+L + + A+ C + G+ LV ++D+ E V RMCR + CW+G+ G G D W I + + W EP+N E GE C A+ + Q W DD C+ KPFVCQ FG + ++LTV T +L GG I G+G T+ S + TG G+V + +GA+L NA G P L+N V +GAT+ LGA + + A A T+ V + + ++ + A ++ +G Y+S L+ + E + S H+ EV + RE + + + G YRL G + T CI Y+AT + L +PSV + GVTVRR GS + +GY Y + D R ++A+ C G N CGC + + A G + ++ T S D +AC V + + + T G G + +G F P AV A V+++ + W+ ++++ GG L AG W + D+ L++ T R GE+R +T S L + L+G G SG G I STL + +++ G SL+ G+TL + W+ G + DG GQL LS D G W G+ GD + G WY NPLCG+ C+ R G VV + + L L E T+ + + + + GG GN +V + + S G + A + G+G L +GG+ D + ++ + + G +V +G ++F GL + GA++ ++++ I D+ L D+ LI FP V A L E +AP A R L W GGT+ G A GE F K + + LV++G W GD+I S F+N GT+
Sbjct: 210 CAPFRTIGQWDDPYRWDTQQVPTSLTEVTIPVDAGVIKLSQDVSVASLTMLGGHILGYDTYCPFGWSVEPGDSSGI----KCYQLHEKPVPFNEAERTC--------NAVKGLGSESRHLVHIRDRAELLVVQRMCRGLTGYAAHSKGCWIGLWDQNGSG-------DFRWISPVAIGTPTDPDLDVGMFLDWRRDEPNNHTISEGLETPGGERCAALVPWQEDPLLLEQGSWNDDSCNVAKPFVCQIFGNTARYTLTVHGHTTLTSGRLEGGIIATGAGATDISHVTVFRSGRIHISTGGASCALGKVILQDGASLEVHSNAFTMGDAYLGEPVNSTLSAALQNHTLGPSFQTMQSNVYVAAGATLLLGAGTMYQNITINARAFVDGTLFVSANTDVYLYQGADMSKSTVT-----VAAASSKVHLSG--YNS--RLSTYDAYELQVS------HRGEVNGEFYRDFHREEANMHLGNTT---GVYRLRVGADVTRCIPYNATASELTTILNALPSVTQRSGVTVRRYGSPTDPRFRFGYTYRIETDSVRTQFYAQGPLSMAIHCYGFDNGCGCAETKVVL--VDATGMPQCPASSTATERSPLSDPNACVVAPTLGVSVISSLAHTSASGAGSIVVEEGVHRFPPISTCTLAVTAGTGVVASDTIT---WSG-----ISVTGGGRLVVAGTSWASWDSTYALYAPEWTTKR------------------------GELRSLSTASPFLMSVDKFYLSGLGSVLSSCPSSNMTWNSGTWDGGIIGGRSTLNIMQALNATG-----TTKSLRYGMTLFINEAATVKWTSGNISLADGADFTVEGQLVIDNSDGAEELFIGMAQLLEAPASDPTGAVLLSQDPGRDWHGYYGD---ELTAELRGG-WYQNPLCGDQCLATNHLTIRAAGAVVCRDDTQVTFSLPLDLVGESTLTIRSNVDI---TMASGGICGNKVVVDISSGTKLELSGGRMLMEATCTIQGQGDLLVTGGS-----HDLSFSIDARITIEGGTMVWPDSRGSGQTITFNGGLVMQKTGALIVFPFSTNIVIYDDVYLRDESLIQFPLIGVAAQASLFD----EQDAP--------------DPAPRGILTSNKTMRWEGGTLRGKADFKANGE-----LFLDGGKKYIKSLAKLVNQGHCEWGTGDLISSDSGDFLNLGTV 1300
BLAST of mRNA_L-elsbetiae_contig1636.4328.1 vs. uniprot
Match: F0Y4F1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4F1_AURAN) HSP 1 Score: 204 bits (518), Expect = 3.960e-49 Identity = 312/1222 (25.53%), Postives = 472/1222 (38.63%), Query Frame = 1
Query: 493 LGYWEDESNWDAGGVPASADQVTIPTDSGFVVLTADITVSSLEISGGALVTHDSTCLSGWTPAPGGTSSSFGSKKCYRLFDNASSWAAAQSACARSVSRQQTGLPRSGALRG-----ALVTVQDQEENNWVS-RMCRADLLERD---------CWVGMARSYGDGNDVE--------------MGDD--LEWAELGQIVGESRYRSWAVREPSNFRSDEAGENCVAIRGSKRRAADQGQARWYDDECDSEKPFVCQAFGISNPFSLTVSTELQLAGGYIVGSGTIISSTLAQVTGNEGQVGILNGATLLNAAFGSMEWSAPSTVGWGGTLRNVGVLSFSGATVSLGAAEDKAGLLAANAGPW----PTIVNEEGAQVVFE-----EDSGVNLEWLLWNEGGSVAVRGALNCTGGGYSSSGTLAV--------------------------------------------DEGGEARFSDSSFIMHQSE-------------VVVISLQSDREVSGQDVETSAKAGGYYRLAFGGEQTSCIGYHATEENVQEALEQMPSVEEEGGVTVRRDGSGKLKLWNYGYRYVVTFDGARRLSAGNALALSCAGSANDCGCIDVTGAISGPRAVGCG--EAGSAEDITSTSAEFDSSACRVQAVVKLETLREGGETVVGGGGILSFSDG-GQYFLPSAVAADVEVMSAAEVVCPQWAAELVGAVNISSGGMLWFAGADWDALDAVQLLHSDPHTPGRAGGAIAS-----PPAFSATVTGDVNVQSNGEIRLAATQ-----------SAALTVIGPLTLAG-GGLSGQGRIQVEGSTLIVAS------------GVSSDGGVDVDEASSLKNGVTLDMFGGGVWSGGGLQARDGVSVVNRGQLFLSADRGTW----FGHGGDFGANKALDFDGER-WYANPLCGESCMVEPWWENREGGEVVGTESSDALLGFVLYNEGTVQVENGGRLEWHAVGQGGG-NGSMVLPGANSTNVFSNGGFVFGANAVLTGEGVLEFSGGTGHEVLKDTNETVPPLVKVSG-RAVVTFAGVNLSFGRGLTVVDNGAIVFSSSTSSMSISGDLTLTDDGLIAFPPPSVHASLVLAGGAEVEAEAPWGPXXXXXXXXXXXXSASRSSLGVEGKFVWGGGTISGNARV-ICAGESEWSTFFQAASTKKLLNSLHLVSRGAIVWSAGDVIVSLGAAFVNQGTLLLFE 3747
+GY++ +NWD G VP S+D + + G V L D T+++L++SGG LV S C GW+ T+ +F C R + +W A+ C + G AL G L ++ N S R+ +D R CW+G+ SY + + DD WA+ ++ + YRSWA REP FR G NC A+ + RW C PFVC G + + LTV+ GG + G G + ++ G + L+NA ++ G R G L GA + + +AG W ++ GA+V+ E +GV+ EW + + G++ G N GGG S T+ + DE GEA F +F E V + + D E A A G YRLA G +++ CI +HA+ Q+A+ +P V GG TV R G G + WN+G+RY V +D A + G L+LSCAGSAN CGC D A+S A G + G AE + + C V ++ + GGET G S G + LP+ + + V A AA + + +G L FAG + DA LL P R +A F+ATV + + G++R+A + SA+L+ G +T G GG G G++ ++ +T I G DG D + + L++ V +++ G WS G L +G ++ L + D F D A + D WY+NP CG+ C P GEV +S A+ L+N G +V + G +G GGG +G V+ G + GG + L+G G + SGG VL TV P V VSG A + +LS + NG + +++++S DL ++ G + FP +A+ + R ++ V G W G ISGN V + A S S F + + +V+ A+ G V+ N+GT+ + E
Sbjct: 1108 VGYFDVANNWDGGEVPGSSDTMVLAD--GTVYLAGDATINNLKMSGGELVVGSSECPDGWS-----TTLTFDG--CVRAYATPKTWLEAEEVCHAAGGTSNGGYRGHLALIGDDETNQLASLLCAAATNATSLRLENSDAESRGEEFAPGAEPCWIGITDSYANASGAAPPREQVSRPDAGGAAADDGAWAWADEAAVLYDPLYRSWARREPL-FRG---GANCGALLHRGYDPYSPPRPRWRTHLCSERLPFVCTRRGATTSYDLTVANTFTFTGGAVSGGGVVTPKKMSFTAGMTPE--------LVNAGL-----VVAQSISMGSDARLYGSL---GAWIEV-----------TSAGSWGVSGDALLGGYGARVLSEGAMRITSNGVS-EWAI-HASGTLRCNGYGNANGGGDLSRATIVLASSSSRFVANGRSLAFRTPPVDLVDVSADAPVAREDVLYAKELTDEPGEAVFGTYAFGQGALESAFGALDDAMPLTVSAYKIDGFSDHKNGDGELLAPARGSYRLAAGADESVCIPWHASAREFQDAVNGLPDVAAVGGATVTRHGDGGRR-WNFGFRYEVAYDRAGTATVGT-LSLSCAGSANGCGCFD---AVSRQYAKPTGWCKHGIAEYAKAETGRL----CLTDVAVTVDRVVVGGETTFSDFGTASVELAEGFHALPATLVPPLRVTGARARGVTASAATAYQKLYMEAGS-LTFAGPGYAGDDAAALLFGAPDKFFRGALGLARWSENRDRDFAATVALKSEI-NGGDVRIANPRLADQAAAGGGSSASLSFQGVVTWTGNGGFRGNGKVALQSTTTITTCVSRSGDGDECPRGSRGDGAPDRFQPAHLRDAVVVEIDDGS-WSQGDLLMGEGATLTVAQGLAVDDDASDRSPRIFATARD--ATPGREDDARNGWYSNPTCGDLCQASPTLRVDAAGEV-DVAASAAIFEATLFNRGEFKVASSGAA---TLGDGGGGDGDFVVAGT----LTQRGGVLDLERGALSGSGSVGVSGG---RVLLPG--TVAPSVSVSGGEAAIRGRRADLSS----VAISNGTFKVLADAANVTLSSDLIISG-GALRFPERDSYAAT------------------HRNNLHSGTRNLDRGAMVVHGHLNWTDGAISGNGDVNLMASSSVRSGFIERFA--------RVVNHAAMFLEDGAVVAETEGYMENRGTVEMRE 2229
BLAST of mRNA_L-elsbetiae_contig1636.4328.1 vs. uniprot
Match: A0A6H5JYY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYY7_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 7.030e-17 Identity = 48/70 (68.57%), Postives = 53/70 (75.71%), Query Frame = 1
Query: 3085 NSTNVFSNGGFVFGANAVLTGEGVLEFSGGTGHEVLKDTNETVPPLVKVSGRAVVTFAGVNLSFGRGLTV 3294
NST VFS GGFVFG ++ +TGEGVLEFS GTGHE+ K E V PLVKVSG VVTFAG L GRG+TV
Sbjct: 2 NSTLVFSGGGFVFGGSSSVTGEGVLEFSAGTGHELPKGGQE-VSPLVKVSGHGVVTFAGTYLLLGRGVTV 70
BLAST of mRNA_L-elsbetiae_contig1636.4328.1 vs. uniprot
Match: A0A482SBM3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBM3_9ARCH) HSP 1 Score: 59.7 bits (143), Expect = 5.630e-6 Identity = 25/68 (36.76%), Postives = 38/68 (55.88%), Query Frame = 1
Query: 472 GCARLSTLGYWEDESNWDAGGVPASADQVTIPTDSGFVVLTADITVSSLEISGGALVTHDSTCLSGWT 675
GC +L T W + W G VP +AD VT+P DSG +++ ++T+ SL + +V H + C WT
Sbjct: 152 GCRKLRTGSSWSNAKRWQGGVVPTAADDVTLPVDSGVIIMDGNVTLKSLVVYDATIVGHKTQCSRTWT 219 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1636.4328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1636.4328.1 >prot_L-elsbetiae_contig1636.4328.1 ID=prot_L-elsbetiae_contig1636.4328.1|Name=mRNA_L-elsbetiae_contig1636.4328.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1318bp DNTGGGRGARNMKHQALLLWTSFVVPASAASVAWNTDAVQILLTSSLSEGback to top mRNA from alignment at L-elsbetiae_contig1636:15796..24252- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1636.4328.1 ID=mRNA_L-elsbetiae_contig1636.4328.1|Name=mRNA_L-elsbetiae_contig1636.4328.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8457bp|location=Sequence derived from alignment at L-elsbetiae_contig1636:15796..24252- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1636:15796..24252- >mRNA_L-elsbetiae_contig1636.4328.1 ID=mRNA_L-elsbetiae_contig1636.4328.1|Name=mRNA_L-elsbetiae_contig1636.4328.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7908bp|location=Sequence derived from alignment at L-elsbetiae_contig1636:15796..24252- (Laminarionema elsbetiae ELsaHSoW15)back to top |