mRNA_L-elsbetiae_contig1043.430.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1043.430.1
Unique NamemRNA_L-elsbetiae_contig1043.430.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: D7G5T6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5T6_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 5.090e-121
Identity = 178/223 (79.82%), Postives = 197/223 (88.34%), Query Frame = 1 
Query:  205 MAAPRRRSGYKYAEAASTSFRRRPDTQHPPGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGSGVAMLNPRALEAFEGPYDLWEEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTA--NLPSWYRNHLTMLEEERAAEAELSRRDPDRPARLWVHG 867
            MA  RRRSGYKYAEAA+   RR P+ QHPP GYCLIEADLHRATTSLEV+SFPFL+QLKLRSAINLSAEP+HDK   FFL  GV ML+P++LE+F+GPYDLWEEAAKESL+LLL+A NHPM+L+DSP ECESACLVGCLRR+QHWSMVAIHDEYHM+TMR T YSTSQ+FIERFDLD+VTL A  NLP WYRNHL MLEEER AEAEL+RRDPDRPAR W HG
Sbjct:    1 MAVSRRRSGYKYAEAATV--RRHPEIQHPPDGYCLIEADLHRATTSLEVASFPFLAQLKLRSAINLSAEPLHDKVNGFFLAEGVNMLHPQSLESFDGPYDLWEEAAKESLELLLDAGNHPMILIDSPTECESACLVGCLRRLQHWSMVAIHDEYHMVTMRNTRYSTSQRFIERFDLDIVTLKAKANLPPWYRNHLDMLEEERTAEAELARRDPDRPARAWTHG 221
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: A0A138ZXW1_GONPJ (Protein-tyrosine phosphatase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A138ZXW1_GONPJ)

HSP 1 Score: 106 bits (265), Expect = 9.000e-24
Identity = 63/173 (36.42%), Postives = 98/173 (56.65%), Query Frame = 1 
Query:  289 PPGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGSGVAMLNPRALEAFEGPYDLWEEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTANLPSWYRNHLTMLEEERA 807
            PP  + ++E  ++R+ T L   +FPF+  L LR+A+ LS E       +FF  SG+     R +   +      EE  KE L+L+L+  N P++++ +    E+  L+GCLR++Q W+  +I  EYH     K  +  ++QFIE FDLDLVT   +LP+W+  H  +LEEE A
Sbjct:    5 PPESFGVVERGIYRSNT-LHPLNFPFVKNLNLRTAVMLSPEVPMRSVTNFFEDSGI-----RFVHLGQAWKPNLEELMKEGLELILDKKNQPVMVMCTSGVHETGTLMGCLRKLQGWNFNSIVVEYHSFAGSKARF-VNEQFIELFDLDLVTFPLDLPNWFLFHQELLEEEEA 170
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: A0A1Y1ZD18_9FUNG (Protein-tyrosine phosphatase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1ZD18_9FUNG)

HSP 1 Score: 106 bits (265), Expect = 1.430e-23
Identity = 66/176 (37.50%), Postives = 100/176 (56.82%), Query Frame = 1 
Query:  289 PPGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGSGVAM--LNPRALEAFEGPYDLWEEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTANLPSWYRNHLTMLEEERAA 810
            PP  + ++E  L+R+   L+ S FPF+  L L++AI LS E      L+FF  + + +  L  RA +   G   L EE  KE L+L+LN  N+P++++ +    E+   +GCLR++Q W+  +I  EY   +  K  Y  ++QFIE FD+DLVTL A LP W+     +L EE  A
Sbjct:    5 PPEAFGIVEKGLYRSDL-LQPSHFPFIKTLNLKTAIVLSPEVPSRAVLNFFDENNINLIHLGLRAWKPDLGWKPLSEELVKEGLELVLNNHNYPIIIMCTSGIHETGTFLGCLRKLQTWNFNSIIVEYRSYSGNKARY-INEQFIELFDMDLVTLPAELPEWFVEQYKLLREEEQA 178
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: A0A1S8VZT0_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VZT0_9FUNG)

HSP 1 Score: 105 bits (263), Expect = 4.100e-23
Identity = 62/177 (35.03%), Postives = 103/177 (58.19%), Query Frame = 1 
Query:  292 PGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGSGVAMLNPRALEAFEGPYDLW----EEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTANLPSWYRNHLTMLEEERAA 810
            P  Y ++E +++RA+T L+ +S+P    +K  + ++LS E      L +   + + +++    +  +     W    EE  KE L+L+LNAD HP+L++ +    E+  L+GCLR++Q WS  +I  EY      K+ Y  ++QFIE FDLDLVTL  +LP W+ +H  +L+EE +A
Sbjct:    8 PDVYGIVEKNVYRAST-LQPASYPLFKHIK--TILSLSPEAPTKSILSWMEENRITLVHLGYQQLVKPNTSSWRPVSEELVKEGLELILNADKHPLLVMCTSGVHETGALIGCLRKLQGWSFNSIVFEYRSFAGNKSRY-VNEQFIELFDLDLVTLPRHLPLWFTDHQRLLQEEASA 180
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: A0A151Z7D7_9MYCE (Arf guanyl-nucleotide exchange factor n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z7D7_9MYCE)

HSP 1 Score: 109 bits (272), Expect = 5.870e-23
Identity = 69/182 (37.91%), Postives = 104/182 (57.14%), Query Frame = 1 
Query:  274 PDTQHPPGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAE-PIHDKALHFFLGSGVAMLNPRALEAFE-GPYDLW----EEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTANLPSWYRNHLTMLEEE 801
            P    PP  + ++E  L+R T SL   +FPF+  L L++ I LS E PI  KA+  F       L    L++++      W    EE  KE L+ +LN D +P+++  +    ++  LVGCLRR+Q+W++ +I  EY   + +      ++QFIE FD+DLVTL  NLP+W+R+ L MLEEE
Sbjct:  184 PPQLSPPSLFGIVEPQLYR-TNSLYPVNFPFIKMLGLKTVIQLSPEVPI--KAVSTFFEENSINLIHLGLKSWKVDTSSSWKPITEELIKECLEFVLNYDYYPLMITCTSGVHQTGVLVGCLRRLQNWNLTSILVEYKAFSGQSNTRYVNEQFIELFDVDLVTLPNNLPTWFRDQLKMLEEE 362
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: M2VVU8_GALSU (Phosphatase / phosphoprotein phosphatase / protein tyrosine phosphatase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VVU8_GALSU)

HSP 1 Score: 105 bits (261), Expect = 7.690e-23
Identity = 62/179 (34.64%), Postives = 99/179 (55.31%), Query Frame = 1 
Query:  289 PPGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGSGVAM--LNPRALEAFEGPYDLWEEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTANLPSWYRNHLTMLEEERAAEAE 819
            PP  + ++E  ++R+     +S FPF+  L L++ + LSAE       +F   + + +  L  R+L        + EE  K+ L+ +L+  +HP+L+ D+    +   LVGCLRR+Q+WS+ A+  EY      K  Y  ++QFIE FD+DL+TL  +LP W+R HL    E+ A E E
Sbjct:    7 PPEMFGIVETGIYRSNLFFPIS-FPFIKLLNLKTVLLLSAEVPTKVVCNFLEENDITLVHLGSRSLTTETSWKPMSEELVKDGLEWVLDRKSHPLLVCDTSGIHQVGILVGCLRRLQNWSLSAVIHEYRTFASSKARY-VNEQFIELFDVDLITLPEDLPDWFREHL----EQEAKEIE 179
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: A0A1Y1WPG4_9FUNG (Protein-tyrosine phosphatase n=4 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y1WPG4_9FUNG)

HSP 1 Score: 103 bits (257), Expect = 1.600e-22
Identity = 58/175 (33.14%), Postives = 103/175 (58.86%), Query Frame = 1 
Query:  289 PPGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGSGVAMLNPRALEAFEGPYDLW----EEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTANLPSWYRNHLTMLEEE 801
            PP  + L+E D++R+ T L+  +FPF+  L LR+A+ LS E        FF  SG+ +++   ++ ++   + W    +E  KE ++ +LN  NHP +++ +    E+  L+GC R++Q W+  +I  EYH     K+  + ++Q+IE FD+DL++L  NLPSW+ +   M+ +E
Sbjct:    4 PPELFGLVEKDIYRSNT-LKPENFPFIKTLNLRTALLLSPEIPTRTVSFFFEESGIKLVH-LGIKTWKPDIE-WRPVSDELIKEGIEFILNVQNHPTIVICTSGIHETGTLIGCFRKLQRWNFNSILFEYHSFGGSKS-RNANEQYIELFDIDLISLPKNLPSWFIDQQQMMNDE 174
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: A0A5J4YWH5_PORPP (Putative tyrosine-protein phosphatase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YWH5_PORPP)

HSP 1 Score: 106 bits (264), Expect = 2.070e-22
Identity = 63/182 (34.62%), Postives = 103/182 (56.59%), Query Frame = 1 
Query:  289 PPGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGSGVAMLNPRALEAFEGPYDLW----EEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTANLPSWYRNHLTMLEEERAAEAEL 822
            PP  + ++E  ++R+     +S FPF+  LK+++ + LSA+ +  K +  F       ++   LE+ +   D W    +E  K++L+L L+A  HP+LL D+    +   ++GCLRR+Q WS+ A   EY      KT Y   +QFIE FD+DL+TL  ++P W++ +L M EEE A   E+
Sbjct:   77 PPEYFGIVECGVYRSNLPNPIS-FPFIKLLKIKTVLLLSAD-VPTKLVRTFFEENSFTVHHLGLESSKVDADSWKPLSDELVKDALELALDARTHPVLLCDASGMHQIGTVIGCLRRLQLWSLNAAVSEYRSYAGVKTRYQY-EQFIELFDVDLITLPLHVPKWFKQYLEMEEEELAQLQEM 255
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: A0A0G4J2T3_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J2T3_PLABS)

HSP 1 Score: 103 bits (258), Expect = 2.780e-22
Identity = 61/181 (33.70%), Postives = 103/181 (56.91%), Query Frame = 1 
Query:  289 PPGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGSGVAMLNPRALEAFEGPYDLW----EEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTANLPSWYRNHLTMLEEERAAEAE 819
            PP  + ++E  ++R+  +    +F F+ +L+LRS + LS+E    K    F+         + L+++  P   W    ++  K+SL+ +LN DNHP++++ S    E+  LVGCLRR+Q W+M +I DE+      K+ +  ++QFIE FD+DLVTL   LPSW+ +H+   +  R  E +
Sbjct:   16 PPAAFGIVEDGIYRSN-AFSADNFAFVKRLQLRSILYLSSELTRLKE---FVDQTSIRFCHQGLKSWR-PDVTWKPVSDDLVKDSLEFILNEDNHPVMIMCSSGVHETGILVGCLRRLQFWNMASIIDEHRRYAGAKSRF-VNEQFIEFFDVDLVTLPPRLPSWFVDHIGYFKSVRTGEQD 190
[Close]
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Match: A0A024GR15_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GR15_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.410e-22
Identity = 57/176 (32.39%), Postives = 100/176 (56.82%), Query Frame = 1 
Query:  286 HPPGGYCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGSGVAMLNPRALEAFEGPY-DLWEEAAKESLQLLLNADNHPMLLLDSPVECESACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLTANLPSWYRNHLTMLEEERAA 810
            +PP  Y +++ +++++    + +SFPF++ L L++ I LS + +  +   FF  + V +++  A      P+  + E  AKE++Q +L    HP++L+       S  ++GCLRR+Q+WS+ AI D Y  +         ++QFIE FD+DLVTL   +P W+     ++EEER A
Sbjct:   18 NPPLFYEIVDENVYQSN-KFDSTSFPFVANLALKTVIYLSPDELSSELTDFFEETNVEVIHLGAKYRSLSPWKSMTEGMAKEAIQFVLEKQLHPLMLMCKTGIHMSGTVIGCLRRLQNWSLTAIIDNYRNLASSVKTRFENEQFIELFDVDLVTLPEKMPDWFVESQRIMEEERLA 192
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1043.430.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5T6_ECTSI5.090e-12179.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A138ZXW1_GONPJ9.000e-2436.42Protein-tyrosine phosphatase n=1 Tax=Gonapodya pro... [more]
A0A1Y1ZD18_9FUNG1.430e-2337.50Protein-tyrosine phosphatase n=1 Tax=Basidiobolus ... [more]
A0A1S8VZT0_9FUNG4.100e-2335.03Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
A0A151Z7D7_9MYCE5.870e-2337.91Arf guanyl-nucleotide exchange factor n=1 Tax=Tieg... [more]
M2VVU8_GALSU7.690e-2334.64Phosphatase / phosphoprotein phosphatase / protein... [more]
A0A1Y1WPG4_9FUNG1.600e-2233.14Protein-tyrosine phosphatase n=4 Tax=Neocallimasti... [more]
A0A5J4YWH5_PORPP2.070e-2234.62Putative tyrosine-protein phosphatase n=1 Tax=Porp... [more]
A0A0G4J2T3_PLABS2.780e-2233.70Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A024GR15_9STRA6.410e-2232.39Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1043contigL-elsbetiae_contig1043:5433..10970 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.9
Seed ortholog evalue2.3e-98
Seed eggNOG ortholog2880.D7G5T6
KEGG koko:K18043,ko:K18045
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein tyrosine phosphatase activity
EggNOG OGsCOG2365@1,KOG1572@2759
EC3.1.3.48
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009
Exons6
Model size1177
Cds size1176
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1043.430.1prot_L-elsbetiae_contig1043.430.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1043 5434..10970 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815268.0187838-CDS-L-elsbetiae_contig1043:5433..58171622815268.0187838-CDS-L-elsbetiae_contig1043:5433..5817Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 5434..5817 -
1691682806.8007438-CDS-L-elsbetiae_contig1043:5433..58171691682806.8007438-CDS-L-elsbetiae_contig1043:5433..5817Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 5434..5817 -
1622815268.0323699-CDS-L-elsbetiae_contig1043:6545..66741622815268.0323699-CDS-L-elsbetiae_contig1043:6545..6674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 6546..6674 -
1691682806.8126214-CDS-L-elsbetiae_contig1043:6545..66741691682806.8126214-CDS-L-elsbetiae_contig1043:6545..6674Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 6546..6674 -
1622815268.044216-CDS-L-elsbetiae_contig1043:7193..72751622815268.044216-CDS-L-elsbetiae_contig1043:7193..7275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 7194..7275 -
1691682806.82708-CDS-L-elsbetiae_contig1043:7193..72751691682806.82708-CDS-L-elsbetiae_contig1043:7193..7275Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 7194..7275 -
1622815268.079652-CDS-L-elsbetiae_contig1043:8543..86621622815268.079652-CDS-L-elsbetiae_contig1043:8543..8662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 8544..8662 -
1691682806.842719-CDS-L-elsbetiae_contig1043:8543..86621691682806.842719-CDS-L-elsbetiae_contig1043:8543..8662Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 8544..8662 -
1622815268.0933642-CDS-L-elsbetiae_contig1043:9628..97421622815268.0933642-CDS-L-elsbetiae_contig1043:9628..9742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 9629..9742 -
1691682806.8502626-CDS-L-elsbetiae_contig1043:9628..97421691682806.8502626-CDS-L-elsbetiae_contig1043:9628..9742Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 9629..9742 -
1622815268.1024559-CDS-L-elsbetiae_contig1043:10622..109701622815268.1024559-CDS-L-elsbetiae_contig1043:10622..10970Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 10623..10970 -
1691682806.8579116-CDS-L-elsbetiae_contig1043:10622..109701691682806.8579116-CDS-L-elsbetiae_contig1043:10622..10970Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1043 10623..10970 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1043.430.1

>prot_L-elsbetiae_contig1043.430.1 ID=prot_L-elsbetiae_contig1043.430.1|Name=mRNA_L-elsbetiae_contig1043.430.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=392bp
DECSCRGLSKVRIRNIRLSIWHLAPECRGWISAHRHNPQERLKERHRKPN
LRRIQSKRRAATDTPAGAMAAPRRRSGYKYAEAASTSFRRRPDTQHPPGG
YCLIEADLHRATTSLEVSSFPFLSQLKLRSAINLSAEPIHDKALHFFLGS
GVAMLNPRALEAFEGPYDLWEEAAKESLQLLLNADNHPMLLLDSPVECES
ACLVGCLRRMQHWSMVAIHDEYHMMTMRKTWYSTSQQFIERFDLDLVTLT
ANLPSWYRNHLTMLEEERAAEAELSRRDPDRPARLWVHGHGAFSTSSPHS
EEKRDKEDREDTSGGTSPSRTPQAQAQAQEPSTKANQGQGSSSVVDEQQP
ARRSEERTPAEMVEAAGLLKANSQQSRGKESEPDLSGGGSEG
back to top

mRNA from alignment at L-elsbetiae_contig1043:5433..10970-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1043.430.1 ID=mRNA_L-elsbetiae_contig1043.430.1|Name=mRNA_L-elsbetiae_contig1043.430.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5538bp|location=Sequence derived from alignment at L-elsbetiae_contig1043:5433..10970- (Laminarionema elsbetiae ELsaHSoW15)
GATGAGTGTTCCTGTCGAGGGCTATCTAAGGTGCGTATACGCAACATCAG
GTTGAGTATTTGGCATTTGGCACCGGAATGCCGCGGCTGGATCTCGGCGC
ATCGGCACAACCCACAAGAACGCCTCAAGGAGAGACACCGAAAACCGAAT
CTTCGTAGAATCCAGTCAAAGCGGCGAGCGGCGACAGACACACCGGCCGG
CGCGATGGCAGCTCCCCGCCGGCGCTCGGGCTACAAGTATGCCGAGGCGG
CGTCGACATCGTTTCGCCGACGCCCAGACACGCAACACCCGCCAGGTGGC
TACTGCTTGATCGAGGCCGATCTTCATAGAGCCACAACATCCTTGGAGGT
ATGTATGTAGCAGCAGCAGCAGCAATCGCACGCAAAGACTGCAGCGAGGA
AACGCAGTAGTTAGTAAATTATGCTCGTGTTCTCCTACTCATGCTTGCCC
TGGAATCCCACCTGAGGTGTTGGCCGATAGACCCCCTGTCTGCAGCATTC
TGTGCGTGGTGTAGATTGAGGTTGACATGTATGTAGTCCGACTCGCTCCG
CACTGAGATCTGCGGTCCCGCTCTTTTCTGTTCAGCTTTGCCTCCGGAGT
GCTGTGCACACCAGTGGTTTGACGCTGTCAGTTTGCCACAAATTTTGGAG
ATGTACCACGAGGAACGCTGCAAAATATGAGTTTTTTTGTGGGAAAGATA
GAGATTTCGTGGGCGTAAGGCGCAAGACACCACACTTCCGTAGACCGACA
CTCCGCCCCTACTAGCCACCGACAAAACCTACCAAGAGCAAAGGAGCGCC
AGGGATTTCCCTAAAGTCAGGCCCTGAGAAATTCAGACGAAAACTTGTGA
ACTACTGTGATCACACAACCACAAAGCAACAGAACCAGCGCAGACCCACA
TTTTGAAATTTAGCGCTGCGCCACAAGATTCTAACACGAAAGAGAGAAAC
AGCAGGGTGATGGCCATAGAGGCGAAGGGCGCGCGTCGCCCTTCTACTAT
AGTCTCTCTGCGGCTCAGGCTTCGACGCTCACAACCCCCGTCGCGACACC
CCTCCGAGGTCGTGCAGCACACCAAATATGTTGCTACTCTACTCTGCACA
AAGTTTGCCATGTTGCTCAGCAGAAAACTCCTAGATTTTAATATTTTAAT
CTTGTTCAATTCACCGACCTGCTCGTCCCCCCCCCCCCTCCGCACCCATG
GCATCTATCATCTCGCAACTCTCCCAAGGTGTCCAGCTTTCCCTTCCTGT
CTCAGCTGAAGCTCCGGTCGGCGATCAACCTGTCCGCGGAACCCATCCAC
GACAAGGCCTTACATTTTTTCCTCGGCTCGGGAGTTGCCATGGTAAGTGA
GCCCAGCCTGGCATTGGCCTTGCCGCACTACTGCCGTAGAGCAGTGGCGA
GGAATCCCAACAGCGCCGCCATCTCTCGCCTTTTTCTGCAGAGAGAAGCG
GTTTCTCTGGTGCGTTATCCCTCCTTTTGGAAGCAGTACATATGCATGTA
GCAGCCGGAGGACTTTTTTCTGGCTGTTTGGAGCAGAGTTCACTGGGACT
TCTTGCCGTCGGCTGCGTGCGCTGTTGGACAGCCCGTCACCGGGTTAGGC
TTGTCAGCTGTACACATACAAAGTACCAGTCTATAGTGTCCATTTCACCG
CAAAACGCAGCGAGTTGTACTTGAATCTGCCGTGTCTGGTGCGCGCACCA
CCGCGCGGTGTAATCAAAAGCCCCCCTGCGGACCGCAAGTTCCCATAGCG
GGGCCCCTCCACGGGCAAGATAAACTTTCTGCCGTGATCAGTCAGGCTGC
GCAACGTTAGGTGCATGTCTTTCACGTTACATATGACTTCAAGCGATCAA
AAATAACTCCGCCAACCCCCCCCCCCCCCCCCCCCCCACATGACCTTAGG
CCAACCCGCCCCCCCTAGCTCCCGTTTTACAGGCCCACCCCTTCTTCCCG
ACACACACACAAAAAAAANNNNNNNNNNGCCTGTATCAGTTCTGCAGCCC
ATCTTTAATGGTTTATTTTCCTCCTACAATTAGGCTATTGATGAACAAAA
AAACATCGCCCCCCCCCCCCCCCCCCCCATCTACATAGTTGACTTGCGAC
CAGCGCGCCACCGATGTCGTCCGTTTTACAGGAGTCCACTTACTTGCAGT
AACATACAAAAATAACATTACTTCCATTCTAATAACAGCGAACATGGCCC
GACACGACAAGTCTTAAACCGTGCATCGGGCTTGTTGTGCAGGTAGGCTC
ACCCTGTGCGGTGTGACCGGTACCCGCACCGCTTATCTATCCATCCCGTC
CGTCCCAGTTGAATCCGCGAGCTTTGGAGGCGTTCGAGGGTCCATACGAC
CTCTGGGAAGAAGCGGCGAAGGAATCGCTGCAGCTCTTGCTGAACGCGGA
CAATCACCCGATGCTACTCCTCGACAGGTTAGTCGGCCATTCGTGTCAAC
GGCCTCTTGTATTCTGTGTTTCTGCTCTGATGCTCCTACTCCTCCTCGTA
GACGTGTAGACACGGGTGGGTTTGGATAGCAGCACCGAGTAACGCTGTTT
TGGGGATAGCGGCCGGTTTGCTCTTCCTGACTGACCAGCACCAGACGAGT
CTGTCATGGTATTCCCTCCTTCAGAAGGACAGATCATGTTTGCTCCATAA
CCCTTATTCCAGCGCAGGTCGTTTTTAGCATAGCCTCCGTATATGTACAT
ATATCGATGGACATTGCAACCAGCCAGCCACAAAGCACAAGTCCGCTGTT
CCGTGAATCGCCGTCGTTTTATTCCCTGTTGCAGTTTCTCCTCGCGTTGA
CACACCGCTTCCTCGGGGCCCCTTTAGCGTAGTGTAGGCGACCGGCATAG
TACACCCGGAAGGCATTCAATGCGGCGGCAAGCTCAGCTCCTTTCAGCAA
GACGCGAGAAGAGTAGTGTGTTTGTGTCTAGCTAGATGATAGACAGGCAG
GCGCCAAATACTGCTGTTGTGGTATGTGGAATGGTCGTAAGGGCGTACCA
CCAAACTGACCGCAATCCCTTGAAATCTCCCCCTTCAAGCATCATCCATC
ATCCCGCTTCTCGTAGTTTGGATTTCTAGTTTGAATTTACTTACTACCAG
TCCACTTTTGTTTTTGACATCGCATCGAGCAGTATGCCCTTTTGAGGGTA
AGTTAGCCTTTGACCACGGGAATCGACCGCGCCGAGTGTTTTGTTGGATT
AGTACGGGTATATGGAGGTACTGGATAGAGAGATCGGAACGGTTTTTAAT
GTGAAGACAACACCAACACCAACATCAACATCAACAAGAGCAACGAGGCA
CACACGCGACTGTCAGCGGGACTGTCAACAACAACCACTAAGCGCCTTTT
TTTCATCCCCGCCGGTGCACGCATGCGGTTTTGTATCTGGTGCACCGTAC
ATGATGGTACTCACGGTGATAGGATGGGGATGGTTGTCTTCGACTGCGTT
CTCAAGCCTGGTGGACCATGATGCAACACAACATCCGAAATGTTTACACT
GCCTTTCCCACGGGTGCAATGATCAGCTTGTATTCGACAAGACAACTCGT
TTACAAGATGGCGTATCGTACACACTTGTATGCAAATACACATGTCCAGG
TTGGTCTCATTTTGTTGATTTTATTGGTTGCATCTATCTACGCCCATCCC
TCGTCGATGAATCGCTTGCTGTCCCAACCATGTGTTTCGACGCAGCCCGG
TAGAGTGCGAGTCGGCGTGCCTCGTGGGGTGTCTCCGCCGCATGCAGCAC
TGGAGCATGGTCGCCATCCACGATGAGGTATTTCGTTACAGTATTTTCCT
TTCCGCGGCAGCAGTGTGCTTATCCCTAGGGGGGGTGGTATCTTATGTCA
CCTTTTTCGTCCGCCTGCGCTCACAATATGCTGTTGTAAATGTATGTGCT
GATCGGTGTGCGTGTCGGGGGTGCAACCGACGCCGGGTCTTTTGATATGA
TGGTACCACCCATAGGTCATTTGTTTCTTATACTTTGGCTTGACGCGCGG
GGTCGGCCACCGCTCCTAGGAAACCCTCAAAATATGGATTACGGATTTTG
TGCGAGCACATCTTGGACGGGAACAAAAATGGGGGGTTAGTATGTTACAT
GGTATGCCTACAACAGTCCCTCTGGGACGACTTTTTCGCAGACTGGACGT
AGACTGCTGACATTTGTACACATGCATTAATCAAAAGTGTTTCTCTGAAA
CGCCAACCCGCAGAGACCGCCCCGTGATTCGCGTTCTTGTTCGGACATAC
CTCTAACCTACCCCTTCACCCGCTACATAAACTCTTGACCCCTCAGTACC
ACATGATGACAATGCGGAAAACGTGGTATAGCACGAGCCAGCAGTTCATT
GAGAGGTTCGATCTGGACCTGGTCACTCTCACGGCCAACCTTCCCTCTTG
GTACAGAAACCATCTCACCATGCTGGTGAGTCAGTGGGCTGCTTCTCTTG
GATATTCATGGGTCTGTTTTTTGAACTCTCTACACGCGTGTACCGAGGGC
GAGGTCTAAAGCGAGCACCGGTCGTGATCGCCATCAATTTTATCGCCGTT
GCAATCATCGTTGTCCTTCTGCTGCAGACCGACATGACGTGTGTGCAATA
TTGAGTCCTCCTGGATGACTGACGATTACTTTTTCAGAGAGCGAAAGCGA
GAAGAGAAGAGAAGCTGATCTGTAAACAGCAGTACTGGGGGAACAATATG
TGCCCTAATGTTTTTTTTGCGTGGTGAATTGTAATTTTCAGGGCGGACTT
CGGAGCGGGCACCGTATATGTTTTCTTTGCTACCGGTACCACCCCACAAA
TGGCACCGAACATTTCAACCAAGAACAAGAGAGGGGAGAGAGGTCCAAAC
AAGACCTCCACGAACTTGAACACGAACACGAACATAAGCAGCACACAGCA
CGCCCTTGGTGATAAAAGCTACACACGCTTGGTGATAAAGCTACACACGG
TATCTAGCTGGAAGCGTCCCTTGTCTAAGTTCGCCAGCTGTGCTACTGCA
ATACCCACTCACCCTTTTGTAGCAAAACATACCTACGTGCGCAACATCGT
GATATTGTCACCCTCCTGGCGCCGCCGCTTCGATCGCATGTCTTTTTGCG
ACTTGGTGGGCTTGGTGGTGTGTTTACCATATGTTGATACACATGTATCC
CAGGAGGAGGAACGCGCAGCCGAGGCAGAGCTGTCCCGACGAGATCCGGA
TCGGCCGGCAAGGCTGTGGGTGCACGGCCATGGCGCCTTCTCTACCTCCT
CACCCCACTCCGAGGAAAAGCGAGATAAGGAGGACAGGGAAGATACCTCG
GGCGGCACATCGCCGTCTCGTACTCCTCAGGCTCAGGCTCAGGCTCAGGA
GCCTTCCACCAAGGCCAATCAAGGTCAAGGTTCAAGTTCCGTCGTAGATG
AGCAGCAACCTGCTAGACGATCAGAGGAGCGGACACCAGCGGAGATGGTA
GAAGCAGCAGGCCTGCTCAAGGCTAACTCTCAGCAGTCGCGGGGGAAGGA
GAGCGAGCCAGATTTGAGCGGTGGAGGGTCCGAGGGGC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1043:5433..10970-

>mRNA_L-elsbetiae_contig1043.430.1 ID=mRNA_L-elsbetiae_contig1043.430.1|Name=mRNA_L-elsbetiae_contig1043.430.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2352bp|location=Sequence derived from alignment at L-elsbetiae_contig1043:5433..10970- (Laminarionema elsbetiae ELsaHSoW15)
GATGAGTGTTCCTGTCGAGGGCTATCTAAGGTGCGTATACGCAACATCAG
GTTGAGTATTTGGCATTTGGCACCGGAATGCCGCGGCTGGATCTCGGCGC
ATCGGCACAACCCACAAGAACGCCTCAAGGAGAGACACCGAAAACCGAAT
CTTCGTAGAATCCAGTCAAAGCGGCGAGCGGCGACAGACACACCGGCCGG
CGCGATGGCAGCTCCCCGCCGGCGCTCGGGCTACAAGTATGCCGAGGCGG
CGTCGACATCGTTTCGCCGACGCCCAGACACGCAACACCCGCCAGGTGGC
TACTGCTTGATCGAGGCCGATCTTCATAGAGCCACAACATCCTTGGAGGA
TGAGTGTTCCTGTCGAGGGCTATCTAAGGTGCGTATACGCAACATCAGGT
TGAGTATTTGGCATTTGGCACCGGAATGCCGCGGCTGGATCTCGGCGCAT
CGGCACAACCCACAAGAACGCCTCAAGGAGAGACACCGAAAACCGAATCT
TCGTAGAATCCAGTCAAAGCGGCGAGCGGCGACAGACACACCGGCCGGCG
CGATGGCAGCTCCCCGCCGGCGCTCGGGCTACAAGTATGCCGAGGCGGCG
TCGACATCGTTTCGCCGACGCCCAGACACGCAACACCCGCCAGGTGGCTA
CTGCTTGATCGAGGCCGATCTTCATAGAGCCACAACATCCTTGGAGGTGT
CCAGCTTTCCCTTCCTGTCTCAGCTGAAGCTCCGGTCGGCGATCAACCTG
TCCGCGGAACCCATCCACGACAAGGCCTTACATTTTTTCCTCGGCTCGGG
AGTTGCCATGGTGTCCAGCTTTCCCTTCCTGTCTCAGCTGAAGCTCCGGT
CGGCGATCAACCTGTCCGCGGAACCCATCCACGACAAGGCCTTACATTTT
TTCCTCGGCTCGGGAGTTGCCATGTTGAATCCGCGAGCTTTGGAGGCGTT
CGAGGGTCCATACGACCTCTGGGAAGAAGCGGCGAAGGAATCGCTGCAGC
TCTTGCTGAACGCGGACAATCACCCGATGCTACTCCTCGACAGTTGAATC
CGCGAGCTTTGGAGGCGTTCGAGGGTCCATACGACCTCTGGGAAGAAGCG
GCGAAGGAATCGCTGCAGCTCTTGCTGAACGCGGACAATCACCCGATGCT
ACTCCTCGACAGCCCGGTAGAGTGCGAGTCGGCGTGCCTCGTGGGGTGTC
TCCGCCGCATGCAGCACTGGAGCATGGTCGCCATCCACGATGAGCCCGGT
AGAGTGCGAGTCGGCGTGCCTCGTGGGGTGTCTCCGCCGCATGCAGCACT
GGAGCATGGTCGCCATCCACGATGAGTACCACATGATGACAATGCGGAAA
ACGTGGTATAGCACGAGCCAGCAGTTCATTGAGAGGTTCGATCTGGACCT
GGTCACTCTCACGGCCAACCTTCCCTCTTGGTACAGAAACCATCTCACCA
TGCTGTACCACATGATGACAATGCGGAAAACGTGGTATAGCACGAGCCAG
CAGTTCATTGAGAGGTTCGATCTGGACCTGGTCACTCTCACGGCCAACCT
TCCCTCTTGGTACAGAAACCATCTCACCATGCTGGAGGAGGAACGCGCAG
CCGAGGCAGAGCTGTCCCGACGAGATCCGGATCGGCCGGCAAGGCTGTGG
GTGCACGGCCATGGCGCCTTCTCTACCTCCTCACCCCACTCCGAGGAAAA
GCGAGATAAGGAGGACAGGGAAGATACCTCGGGCGGCACATCGCCGTCTC
GTACTCCTCAGGCTCAGGCTCAGGCTCAGGAGCCTTCCACCAAGGCCAAT
CAAGGTCAAGGTTCAAGTTCCGTCGTAGATGAGCAGCAACCTGCTAGACG
ATCAGAGGAGCGGACACCAGCGGAGATGGTAGAAGCAGCAGGCCTGCTCA
AGGCTAACTCTCAGCAGTCGCGGGGGAAGGAGAGCGAGCCAGATTTGAGC
GGTGGAGGGTCCGAGGGGGAGGAGGAACGCGCAGCCGAGGCAGAGCTGTC
CCGACGAGATCCGGATCGGCCGGCAAGGCTGTGGGTGCACGGCCATGGCG
CCTTCTCTACCTCCTCACCCCACTCCGAGGAAAAGCGAGATAAGGAGGAC
AGGGAAGATACCTCGGGCGGCACATCGCCGTCTCGTACTCCTCAGGCTCA
GGCTCAGGCTCAGGAGCCTTCCACCAAGGCCAATCAAGGTCAAGGTTCAA
GTTCCGTCGTAGATGAGCAGCAACCTGCTAGACGATCAGAGGAGCGGACA
CCAGCGGAGATGGTAGAAGCAGCAGGCCTGCTCAAGGCTAACTCTCAGCA
GTCGCGGGGGAAGGAGAGCGAGCCAGATTTGAGCGGTGGAGGGTCCGAGG
GG
back to top