mRNA_L-elsbetiae_contig16289.4294.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16289.4294.1
Unique NamemRNA_L-elsbetiae_contig16289.4294.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: D8LE67_ECTSI (Protein MAK16 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE67_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 4.580e-124
Identity = 210/233 (90.13%), Postives = 212/233 (90.99%), Query Frame = 1
Query:    1 RNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALMQAEDEYAEQNPEEMEMXXXXXXXXXXXVEYVEDLEEDESDIEDTAEWGGSYWGAPGSAGAPQGAGARGADS 699
            RNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLY+KTIERAHTPKNLWEKIKLSRNY KALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALM+AEDEYAEQNPE ME  XXXXXXXXXX            DIEDTAEWGGSYWGAPGSAG PQ   ARG DS
Sbjct:   30 RNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYIKTIERAHTPKNLWEKIKLSRNYGKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALMEAEDEYAEQNPEAMEEEXXXXXXXXXXXXXXXXXX---XDIEDTAEWGGSYWGAPGSAGGPQA--ARGGDS 257          
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: A0A835ZFG7_9STRA (Protein MAK16 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFG7_9STRA)

HSP 1 Score: 276 bits (707), Expect = 1.440e-89
Identity = 162/218 (74.31%), Postives = 183/218 (83.94%), Query Frame = 1
Query:    1 RNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALMQAEDEYAEQNPEEMEMXXXXXXXXXXXVEYVEDLEEDESDIEDTAEWGGSYWGAPG 654
            RN YN TGLCN+ SCPLANSRYATI+EHDGVCYLY+K+IERAH+PKNLWEKIKL RNY +ALE VS +L++FPK+LQH++KQRLTKIHQYLIRMRKLKLKA+PKLV IN KVE+RE         AA L+RSIE ELLERLK+GTYGDIYNFPEVQY KAL QAE+E++    EE   XXXXXXXXXXXVEYVE  EE+ESD+ED A WG SYWGA G
Sbjct:   30 RNPYNATGLCNRGSCPLANSRYATIKEHDGVCYLYMKSIERAHSPKNLWEKIKLPRNYTQALEIVSEQLQYFPKYLQHKNKQRLTKIHQYLIRMRKLKLKARPKLVAINKKVERREAKXXXXXEKAADLDRSIETELLERLKRGTYGDIYNFPEVQYGKALQQAEEEFS--GEEEXXXXXXXXXXXXXXVEYVEGDEEEESDMEDGA-WGSSYWGAEG 244          
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: A0A3F2RF83_9STRA (Protein MAK16 homolog n=6 Tax=Phytophthora TaxID=4783 RepID=A0A3F2RF83_9STRA)

HSP 1 Score: 253 bits (645), Expect = 2.030e-80
Identity = 143/215 (66.51%), Postives = 168/215 (78.14%), Query Frame = 1
Query:    4 NEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKAL--------MQAEDEYAEQNPEEMEMXXXXXXXXXXXVEYVEDLEEDESDIEDTAE 624
            N YNVTGLCN+S+CPLANSRYATIREHDGVCYLY+KTIERAHTP  LWE++KLS+NY K+L ++  +L+F+PK L H++KQRLTKIHQYL+RMRKL LK KPKLV IN K+E+REK REKKA+VAAKL+ SIE ELLERL+KGTYGDIYNFPE ++ K L        M+ E             XXXXXXX    VEYVED EEDESD+ED A+
Sbjct:   32 NPYNVTGLCNRSACPLANSRYATIREHDGVCYLYMKTIERAHTPNRLWERVKLSKNYTKSLAQIDEQLQFWPKKLIHKNKQRLTKIHQYLMRMRKLTLKTKPKLVVINKKIERREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPESEFSKVLESNGKRQTMEEEXXXXXXXXXXXXXXXXXXXXDAGQVEYVEDFEEDESDLEDLAD 246          
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: A0A662WIM1_9STRA (Protein MAK16 homolog n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIM1_9STRA)

HSP 1 Score: 250 bits (639), Expect = 8.770e-80
Identity = 142/214 (66.36%), Postives = 170/214 (79.44%), Query Frame = 1
Query:    1 RNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALMQA------EDEYAEQNPEEMEMXXXXXXXXXXXVEYVEDLEEDESDIEDTAE 624
            RNEYNVTGLCN++SCPLANSRYATIREHDGVC+LY+KTIERAHTP  LWE++KLS++Y K+L ++  +L+F+PK L H++KQRLTKIHQYL+RMRKL LK KPKLV IN K+E+REK REKKA+VAAKL+ SIE ELLERL+KGTYGDIYNFPE ++   +         E+E           XXXXXXXX   VEYVED EEDESD+ED A+
Sbjct:    4 RNEYNVTGLCNRNSCPLANSRYATIREHDGVCFLYMKTIERAHTPNRLWERVKLSKSYTKSLAQLDEQLQFWPKKLIHKNKQRLTKIHQYLMRMRKLTLKTKPKLVVINKKIERREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPEREFSSVMASQGKRQTMEEESXXXXXXXXXXXXXXXXXXVGQVEYVEDFEEDESDLEDLAD 217          
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: A0A067C7V2_SAPPC (Protein MAK16 homolog n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C7V2_SAPPC)

HSP 1 Score: 242 bits (618), Expect = 1.450e-76
Identity = 136/206 (66.02%), Postives = 163/206 (79.13%), Query Frame = 1
Query:    1 RNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALMQAEDEYAEQNPEEMEMXXXXXXXXXXXVEYVEDLEE-DESDIED 615
            RNEYNVTGLCN+ SCPLANSRYATIREH+GVCYLY+KTIERAH+PKNLWEK+KLS+NY K+LE++  +++F+PK L HR+KQRLTKIHQYL+RMRKL+LK KP LV IN K+E+RE  RE+KA  AAKL+ SIE ELL+RL+KGTYGDIYNFPE ++ K L   E+E      +E EM   XXX     VEYVED     E D+ED
Sbjct:   30 RNEYNVTGLCNRQSCPLANSRYATIREHNGVCYLYMKTIERAHSPKNLWEKVKLSKNYTKSLEQIDAQMQFWPKKLIHRNKQRLTKIHQYLMRMRKLRLKTKPNLVVINKKIERREARREEKAKTAAKLDSSIEKELLQRLQKGTYGDIYNFPEREFAKVLDDNEEEXXX-GEDEYEMESDXXXGQ---VEYVEDFXXXSEDDMED 231          
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: A0A0P1A7J6_PLAHL (Protein MAK16 homolog n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A7J6_PLAHL)

HSP 1 Score: 240 bits (612), Expect = 1.650e-75
Identity = 134/211 (63.51%), Postives = 162/211 (76.78%), Query Frame = 1
Query:    4 NEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALM-----QAEDEYAEQNPEEMEMXXXXXXXXXXXVEYVEDLEEDESDIEDTA 621
            N YNVTGLCN+S+CPLANSRYAT+RE +GVCYLY+KTIERAHTP  LWE++KLS+NY K+L ++  +L+F+PK L H+ KQRLTKIHQYL+RMRKL L+ KPKLV IN K+++REK REKKA+VAAKL+ SIE ELLERL+KGTYGDIYNFPE ++ K L      Q  +E +E   E       XXXX    VEYVED    ESD+ED A
Sbjct:   32 NLYNVTGLCNRSACPLANSRYATVREENGVCYLYMKTIERAHTPNRLWERVKLSKNYTKSLAQIDEQLQFWPKKLIHKCKQRLTKIHQYLMRMRKLTLQTKPKLVVINKKIDRREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPEREFSKVLADKGKRQTMEEESEDEAEIEYEVDEXXXXDVGQVEYVEDFXXXESDLEDLA 242          
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: A0A484EAC2_BRELC (Protein MAK16 homolog n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EAC2_BRELC)

HSP 1 Score: 239 bits (610), Expect = 3.510e-75
Identity = 138/215 (64.19%), Postives = 166/215 (77.21%), Query Frame = 1
Query:    4 NEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKAL--------MQAEDEYAEQNPEEMEMXXXXXXXXXXXVEYVEDLEEDESDIEDTAE 624
            N YNVTGLC++S+CPLANSRYATIRE DGVCYLY+KTIERAHTP  LWE++KLSRNY K+L ++  +L+F+PK L +++KQRLTKIHQYL+RMRKL LK KPKLV IN K+++REK REKKA+VAAKL+ SIE ELLERL+KGTYGDIYNFPE ++ K L        M+ E E  E+       XXXXXXX    VEYVED     SD+ED A+
Sbjct:   32 NPYNVTGLCHRSACPLANSRYATIREEDGVCYLYMKTIERAHTPNRLWERVKLSRNYTKSLAQIDEQLQFWPKKLIYKNKQRLTKIHQYLMRMRKLTLKTKPKLVVINKKIDRREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPEREFSKVLADKGKRQTMEEESEGEEEIEYXXXXXXXXXXXVSGQVEYVEDFXXXXSDLEDFAD 246          
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: F0XYH3_AURAN (Ribosomal_L28e domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYH3_AURAN)

HSP 1 Score: 236 bits (601), Expect = 7.050e-75
Identity = 136/206 (66.02%), Postives = 161/206 (78.16%), Query Frame = 1
Query:    1 RNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALMQAED-EYAEQNPEEMEMXXXXXXXXXXXVEYVEDLEEDESDIED 615
            RNE NVTGLCNKS+CPLANSRYATIRE +G CYL +KTIERAH PK LW+KIKL RNYAKAL  V+ ELE FPK LQHR+KQRLT+I+QYLIRMRKL L+++P +  ++ KVE+RE  +E KALVAAKL +SIE ELL+RLK+GTYGDIYNFPE+ Y+ AL  A+D E AE     ME      XXX   VEY+E  E+ ESD+ED
Sbjct:   28 RNEQNVTGLCNKSACPLANSRYATIREIEGRCYLMIKTIERAHMPKKLWQKIKLPRNYAKALAVVTEELEHFPKFLQHRNKQRLTRIYQYLIRMRKLALRSRPHMAVVHKKVERRENRKEVKALVAAKLNKSIESELLQRLKQGTYGDIYNFPEMHYNAALDSAQDLELAE-----MEAEYEDEXXXERLVEYIEAAEDFESDMED 228          
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: A0A3M6VQB5_9STRA (Protein MAK16 homolog n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VQB5_9STRA)

HSP 1 Score: 236 bits (603), Expect = 4.530e-74
Identity = 140/214 (65.42%), Postives = 170/214 (79.44%), Query Frame = 1
Query:    4 NEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKALMQ--AEDEYAEQNPEEMEMXXXXXXXXXXX--------VEYVEDLEEDESDIED 615
            N YNVTGLCNK++CPLANSRYATIRE +GVC+LY+KTIERAHTP  LWE++KLS+NY K+L ++   L+F+PK L H++KQRLTKIHQYL+RMRKL LK KPKLV IN K+++REK REKKA+VAAKL+ SIE ELLERL+KGTYGDIYNFPE  +   L          E++ +E+E XXXXXXXXXXX        VEYVED +E+ESD+ED
Sbjct:   32 NLYNVTGLCNKTACPLANSRYATIREENGVCFLYMKTIERAHTPNRLWERVKLSKNYTKSLAQIDAHLQFWPKKLVHKNKQRLTKIHQYLMRMRKLILKTKPKLVVINKKIDRREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPERDFSNVLASNGKRQTIEEESDDEIEYXXXXXXXXXXXXXXXXAGQVEYVEDFDEEESDLED 245          
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Match: H3HCF7_PHYRM (Protein MAK16 homolog n=14 Tax=Phytophthora TaxID=4783 RepID=H3HCF7_PHYRM)

HSP 1 Score: 234 bits (597), Expect = 2.100e-73
Identity = 117/160 (73.12%), Postives = 139/160 (86.88%), Query Frame = 1
Query:    4 NEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWEKIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLKAKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIYNFPEVQYDKAL 483
            N YNVTGLCN+SSCPLANSRYATIRE DGVC+L++KTIERAHTP  LWE++KLS+NY KAL ++  +L+F+PK L H++KQRLTKIHQYL+RMRKL LK KPKLV IN K+E+REK REKKA+VAAKL+ SIE ELLERL+KGTYGDIYNFPE ++   L
Sbjct:   32 NAYNVTGLCNRSSCPLANSRYATIREEDGVCFLFMKTIERAHTPNRLWERVKLSKNYTKALAQLDEQLQFWPKKLVHKNKQRLTKIHQYLMRMRKLTLKTKPKLVVINKKIERREKRREKKAMVAAKLDNSIEKELLERLQKGTYGDIYNFPEREFSSVL 191          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16289.4294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE67_ECTSI4.580e-12490.13Protein MAK16 homolog n=2 Tax=Ectocarpus TaxID=287... [more]
A0A835ZFG7_9STRA1.440e-8974.31Protein MAK16 homolog n=1 Tax=Tribonema minus TaxI... [more]
A0A3F2RF83_9STRA2.030e-8066.51Protein MAK16 homolog n=6 Tax=Phytophthora TaxID=4... [more]
A0A662WIM1_9STRA8.770e-8066.36Protein MAK16 homolog n=1 Tax=Nothophytophthora sp... [more]
A0A067C7V2_SAPPC1.450e-7666.02Protein MAK16 homolog n=4 Tax=Saprolegniaceae TaxI... [more]
A0A0P1A7J6_PLAHL1.650e-7563.51Protein MAK16 homolog n=1 Tax=Plasmopara halstedii... [more]
A0A484EAC2_BRELC3.510e-7564.19Protein MAK16 homolog n=1 Tax=Bremia lactucae TaxI... [more]
F0XYH3_AURAN7.050e-7566.02Ribosomal_L28e domain-containing protein (Fragment... [more]
A0A3M6VQB5_9STRA4.530e-7465.42Protein MAK16 homolog n=1 Tax=Peronospora effusa T... [more]
H3HCF7_PHYRM2.100e-7373.13Protein MAK16 homolog n=14 Tax=Phytophthora TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16289contigL-elsbetiae_contig16289:196..2507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.5
Seed ortholog evalue1.5e-100
Seed eggNOG ortholog2880.D8LE67
Preferred nameMAK16
KEGG rclassRC00020,RC02814,RC02821
KEGG koko:K01738,ko:K14831,ko:K19984
KEGG ReactionR00897,R03601,R04859
KEGG Pathwayko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00021
Hectar predicted targeting categoryother localisation
GOsGO:0000460,GO:0000463,GO:0000466,GO:0000470,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
EggNOG free text desc.maturation of LSU-rRNA
EggNOG OGsCOG5129@1,KOG3064@2759
EC2.5.1.47
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko04131
Ec32 ortholog descriptionMak16 protein
Ec32 orthologEc-00_001130.1
Exons5
Model size736
Cds size735
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16289.4294.1prot_L-elsbetiae_contig16289.4294.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16289 196..2507 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815672.3464882-CDS-L-elsbetiae_contig16289:195..3541622815672.3464882-CDS-L-elsbetiae_contig16289:195..354Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 196..354 +
1691683028.7088952-CDS-L-elsbetiae_contig16289:195..3541691683028.7088952-CDS-L-elsbetiae_contig16289:195..354Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 196..354 +
1622815672.357875-CDS-L-elsbetiae_contig16289:656..8301622815672.357875-CDS-L-elsbetiae_contig16289:656..830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 657..830 +
1691683028.7213361-CDS-L-elsbetiae_contig16289:656..8301691683028.7213361-CDS-L-elsbetiae_contig16289:656..830Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 657..830 +
1622815672.3680449-CDS-L-elsbetiae_contig16289:1430..15741622815672.3680449-CDS-L-elsbetiae_contig16289:1430..1574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 1431..1574 +
1691683028.7307603-CDS-L-elsbetiae_contig16289:1430..15741691683028.7307603-CDS-L-elsbetiae_contig16289:1430..1574Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 1431..1574 +
1622815672.3780086-CDS-L-elsbetiae_contig16289:2077..21671622815672.3780086-CDS-L-elsbetiae_contig16289:2077..2167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 2078..2167 +
1691683028.738792-CDS-L-elsbetiae_contig16289:2077..21671691683028.738792-CDS-L-elsbetiae_contig16289:2077..2167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 2078..2167 +
1622815672.3899097-CDS-L-elsbetiae_contig16289:2339..25071622815672.3899097-CDS-L-elsbetiae_contig16289:2339..2507Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 2340..2507 +
1691683028.7483597-CDS-L-elsbetiae_contig16289:2339..25071691683028.7483597-CDS-L-elsbetiae_contig16289:2339..2507Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16289 2340..2507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16289.4294.1

>prot_L-elsbetiae_contig16289.4294.1 ID=prot_L-elsbetiae_contig16289.4294.1|Name=mRNA_L-elsbetiae_contig16289.4294.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=245bp
RNEYNVTGLCNKSSCPLANSRYATIREHDGVCYLYLKTIERAHTPKNLWE
KIKLSRNYAKALERVSRELEFFPKHLQHRSKQRLTKIHQYLIRMRKLKLK
AKPKLVTINPKVEKREKMREKKALVAAKLERSIEGELLERLKKGTYGDIY
NFPEVQYDKALMQAEDEYAEQNPEEMEMEEEEEEEEEGEVEYVEDLEEDE
SDIEDTAEWGGSYWGAPGSAGAPQGAGARGADSDSEGDDEDSDGE
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mRNA from alignment at L-elsbetiae_contig16289:196..2507+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16289.4294.1 ID=mRNA_L-elsbetiae_contig16289.4294.1|Name=mRNA_L-elsbetiae_contig16289.4294.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2312bp|location=Sequence derived from alignment at L-elsbetiae_contig16289:196..2507+ (Laminarionema elsbetiae ELsaHSoW15)
AGGAATGAGTACAACGTGACGGGGCTGTGCAACAAGAGCTCCTGCCCCCT GGCGAACTCTCGATACGCCACGATCCGCGAGCACGACGGCGTGTGCTACT TGTACCTCAAGACGATCGAGCGCGCTCACACGCCCAAGAACCTGTGGGAA AAAATTAAGGTGTGGAAACAGCGGCAGCAGCAGCAGCAGCAGCAGCAGCA GCTGTGTTGAGAGTATATTTGATCCGATCGTCTCACGGAGGCAGGGAGCT ACATACTGCAGGAATAAGGGTAGATGTATAGATGGGCGAGAGGATCAGCG AAAATGTTTTGGTTTCGAGTGTTGTTTGTGTGCGTGTGTTTCTGTGTTTT GTGTGTACATTGTCCGTCGCTGCTGTTGTCATTGCTGTGCCGTCGTTTCT GTTAATTCCTCGTTGTTAACGACCTTTTATCGACCACGGCTGGCTACCGC AACCCCGCCAGCTGTCGCGAAACTACGCCAAGGCCCTGGAGCGAGTGTCG CGAGAGCTGGAGTTCTTCCCGAAGCACCTGCAGCACAGGAGCAAGCAGCG CCTCACCAAGATACACCAGTACCTCATCCGGATGCGGAAGCTCAAGCTGA AGGCCAAGCCGAAGCTCGTCACCATCAACCCCAAGGTACCTACGGCGTGC ATCCCGTTGGCAATCAGATCGAAACTCTTTATCAGTATTTGGCGTATGTG TGTATACGAAGTATACTTCTATGTGGGATGCATACTTCGATGTATGTACG CCCACGAGGGAAAGGGGCGGCTGAACCCTTCTCGCGGTAAAGTCTTAGGC AAGCACCGCAGAAGGTGGGAGTGGGGGCCTCGGGTAGAGGAACCCTTCTG TGCGACCACGGTTCAGTTCTCTCGCAAGATGCCCTCGTGGCGAGGAGCTC GTTGAGCACTGGAGATAAATGTGAAGAATAAAAATAAAAATAAAAACAGA GAGGTAATTTGTCGTACCCGAATCAGTCGCCGGGCTAAGCAGGTGCCTTG CTATCACACTCTTCCCACACACAACGAACTAGCTGTTATCCGGTAACGCT GCACTCATGTTCGAGGAACCCCCGGGCATAGAAGGACCATGGGGATTAAA CGCCGTGTTTAGCATGGGGCGTCGATTCGATTCGTTTCCCCGCCCGCATG TTCTGCATATAACAACCGCTCGGGTGTTACAACCGCTCGGGTGTTACAAC CGCTCGGGTGTTCTACCGCTTGACGGCGTTTTCAGGTGGAGAAACGTGAG AAGATGAGAGAGAAGAAGGCGCTGGTGGCCGCTAAGCTGGAGCGGTCGAT CGAGGGGGAGCTGCTCGAGCGGCTGAAGAAGGGCACCTACGGAGACATCT ACAACTTCCCGGAGGTCCAGTACGACAAGGCAAGTCTCGCGCACTCGTTG CCGCTGTTATTCGCTGCACAGCATGCGCTACACATGCCCCTCCCCCCACC CCCCCAAGTTTCATGCCATCGTGGAAGGTGTGTGTTCACCTTGAAGCTAA AACTGCGAGTAAATTTGGAGTATGTGATGTAGATGTTTCAAAGGAAAGGC CGCCCGTCAAGATCAGGTGCAACGGGCCGAAACGGGTGTTGTTTTTTGAA TACTGGCCTGTCGCGCGTCTACTCTGTTCAAGTGGTACGTGGTACGCCTT AGCGTACTTTTCGTTCCGTCCCGTTCCGTCCCATTCCGTTCCATTCCATC CCATTCTATCCCGTTCCATCCCGTCGGCACCATTGCCTTGCCTCGCGCTT CCGAAGCAGGCGCTCACTTCCGTTCCGTCCCATTCCGACCCATTACCGCT GACTTTTGCCGTCCCGTTCCATCCCATCCCATCCTATCCCGTCCCCACCC TTGACTTGCCTTGCGTTTCCGAACCGAAGCAGGCGCTGATGCAGGCGGAG GACGAATACGCCGAGCAGAACCCGGAGGAGATGGAGATGGAGGAGGAGGA AGAGGAGGAGGAGGAGGGCGAGGTGAGCCAGGGTCCAAGCGCTGCGTCTA GTGGTTCGGGGGCTGTTCTTACGAAGTGGCAGGCAACAGCAGAAGTACGC CCGGCATCGCTATTACTGCCGTCATTGCACCTACCTACCCGAGCGTTTTA ACGCCCTTGGATTTTTCCTGGATTTTTACCGCCCGCCCTGGCAGGTGGAG TACGTGGAGGACCTTGAGGAGGATGAGAGCGACATCGAGGACACGGCGGA GTGGGGAGGGTCGTACTGGGGGGCGCCGGGATCGGCGGGGGCTCCGCAGG GGGCGGGGGCAAGAGGAGCGGATAGCGATAGCGAGGGCGACGACGAGGAC AGCGATGGTGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16289:196..2507+

>mRNA_L-elsbetiae_contig16289.4294.1 ID=mRNA_L-elsbetiae_contig16289.4294.1|Name=mRNA_L-elsbetiae_contig16289.4294.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1470bp|location=Sequence derived from alignment at L-elsbetiae_contig16289:196..2507+ (Laminarionema elsbetiae ELsaHSoW15)
AGGAATGAGTACAACGTGACGGGGCTGTGCAACAAGAGCTCCTGCCCCCT
GGCGAACTCTCGATACGCCACGATCCGCGAGCACGACGGCGTGTGCTACT
TGTACCTCAAGACGATCGAGCGCGCTCACACGCCCAAGAACCTGTGGGAA
AAAATTAAGAGGAATGAGTACAACGTGACGGGGCTGTGCAACAAGAGCTC
CTGCCCCCTGGCGAACTCTCGATACGCCACGATCCGCGAGCACGACGGCG
TGTGCTACTTGTACCTCAAGACGATCGAGCGCGCTCACACGCCCAAGAAC
CTGTGGGAAAAAATTAAGCTGTCGCGAAACTACGCCAAGGCCCTGGAGCG
AGTGTCGCGAGAGCTGGAGTTCTTCCCGAAGCACCTGCAGCACAGGAGCA
AGCAGCGCCTCACCAAGATACACCAGTACCTCATCCGGATGCGGAAGCTC
AAGCTGAAGGCCAAGCCGAAGCTCGTCACCATCAACCCCAAGCTGTCGCG
AAACTACGCCAAGGCCCTGGAGCGAGTGTCGCGAGAGCTGGAGTTCTTCC
CGAAGCACCTGCAGCACAGGAGCAAGCAGCGCCTCACCAAGATACACCAG
TACCTCATCCGGATGCGGAAGCTCAAGCTGAAGGCCAAGCCGAAGCTCGT
CACCATCAACCCCAAGGTGGAGAAACGTGAGAAGATGAGAGAGAAGAAGG
CGCTGGTGGCCGCTAAGCTGGAGCGGTCGATCGAGGGGGAGCTGCTCGAG
CGGCTGAAGAAGGGCACCTACGGAGACATCTACAACTTCCCGGAGGTCCA
GTACGACAAGGTGGAGAAACGTGAGAAGATGAGAGAGAAGAAGGCGCTGG
TGGCCGCTAAGCTGGAGCGGTCGATCGAGGGGGAGCTGCTCGAGCGGCTG
AAGAAGGGCACCTACGGAGACATCTACAACTTCCCGGAGGTCCAGTACGA
CAAGGCGCTGATGCAGGCGGAGGACGAATACGCCGAGCAGAACCCGGAGG
AGATGGAGATGGAGGAGGAGGAAGAGGAGGAGGAGGAGGGCGAGGCGCTG
ATGCAGGCGGAGGACGAATACGCCGAGCAGAACCCGGAGGAGATGGAGAT
GGAGGAGGAGGAAGAGGAGGAGGAGGAGGGCGAGGTGGAGTACGTGGAGG
ACCTTGAGGAGGATGAGAGCGACATCGAGGACACGGCGGAGTGGGGAGGG
TCGTACTGGGGGGCGCCGGGATCGGCGGGGGCTCCGCAGGGGGCGGGGGC
AAGAGGAGCGGATAGCGATAGCGAGGGCGACGACGAGGACAGCGATGGTG
AGGTGGAGTACGTGGAGGACCTTGAGGAGGATGAGAGCGACATCGAGGAC
ACGGCGGAGTGGGGAGGGTCGTACTGGGGGGCGCCGGGATCGGCGGGGGC
TCCGCAGGGGGCGGGGGCAAGAGGAGCGGATAGCGATAGCGAGGGCGACG
ACGAGGACAGCGATGGTGAG
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