mRNA_L-elsbetiae_contig16276.4287.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16276.4287.1
Unique NamemRNA_L-elsbetiae_contig16276.4287.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: D8LSM6_ECTSI (GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSM6_ECTSI)

HSP 1 Score: 427 bits (1097), Expect = 3.060e-144
Identity = 206/224 (91.96%), Postives = 215/224 (95.98%), Query Frame = 1
Query:    1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            C  QKYGE+QTA+FWCLGLGEPW ISGLHGDGIYDMMDNV EHLY+VD  AE+EDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGK   VDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADR+QSDGRACVVVCNKWDLVEDK+D+SYNKAV+YARQMLSPVKWAEVCFTSAKTGQRCTK+
Sbjct:  342 CESQKYGEIQTAEFWCLGLGEPWPISGLHGDGIYDMMDNVAEHLYEVDENAEEEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGK---VDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRIQSDGRACVVVCNKWDLVEDKDDSSYNKAVEYARQMLSPVKWAEVCFTSAKTGQRCTKL 562          
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A836CJC9_9STRA (GTPase Der n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC9_9STRA)

HSP 1 Score: 296 bits (759), Expect = 9.690e-98
Identity = 139/218 (63.76%), Postives = 178/218 (81.65%), Query Frame = 1
Query:   19 GEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            G  Q A+FW LGLGEPW +SGLHG G+ ++++ +K HLY  D + + +  INV+IVGRPNVGKSSLLN+L+G+ R+IVSDV GTTRD+IDA+FERG RTYRL+DTAGIRRK K   ++YGNEFFM+NRAFKAIRR+DVVLL++DV  GI DQDRVLA+R+ ++G+ACVVV NKWD VE K+D +Y K++ Y R+ML PV+WA++ FTSA TGQR   +
Sbjct:    2 GAAQAAEFWALGLGEPWPVSGLHGYGVAEVLEQIKPHLYPADTSGDADTTINVSIVGRPNVGKSSLLNKLYGQERAIVSDVAGTTRDTIDALFERGDRTYRLIDTAGIRRKKK---IEYGNEFFMINRAFKAIRRSDVVLLVIDVVDGIKDQDRVLAERIAAEGKACVVVLNKWDAVE-KDDKTYLKSIAYVREMLPPVRWADIVFTSALTGQRTLSI 215          
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: W7TQC4_9STRA (GTPase Der n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQC4_9STRA)

HSP 1 Score: 275 bits (704), Expect = 2.360e-85
Identity = 135/224 (60.27%), Postives = 172/224 (76.79%), Query Frame = 1
Query:    1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            C     GE   + FW LGLGEP+ +SGLHG G+ +M++ +  H+Y+V+  AE E+ I VAIVGRPNVGKSSLLNRL+G+ R+IVSDV GTTRD++DA+ E  G++YR +DTAGIRR+ K   V+YGNEF MVNRA KA+RRADVVLL+VDV  GI DQD++LA R+  DGRACV+V NKWD VE K+D ++N+AV Y ++ L  V WA+V FTSA TGQRC K+
Sbjct:  349 CETPNMGEAMASMFWKLGLGEPFPVSGLHGTGVAEMLERMLPHIYEVEE-AEREEAIKVAIVGRPNVGKSSLLNRLYGKERAIVSDVAGTTRDAVDALVEVNGKSYRFIDTAGIRRRKK---VEYGNEFLMVNRALKAVRRADVVLLVVDVVEGINDQDKILAQRIAEDGRACVIVANKWDAVE-KDDRTFNEAVVYVKEELFAVSWADVLFTSALTGQRCHKI 567          
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: B7FRD0_PHATC (GTPase Der n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FRD0_PHATC)

HSP 1 Score: 256 bits (655), Expect = 2.200e-79
Identity = 129/235 (54.89%), Postives = 169/235 (71.91%), Query Frame = 1
Query:    1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDN---INVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERG--------GRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            C  +K G +  ADFW LGLGEP+ +S LHG G  ++M+ + + + +  +T + ED    IN+AI+GRPNVGKSSLLN +FG+TR+IVS++ GTTRDSIDA+ ER            YR VDTAGIRRKGK   VD+G EFFMVNRA +AIRRADVVLL++D  +G+ +QDRVLA ++  DGRACV+VCNKWD V DK+  +Y+K+V Y R+ L  ++WA + F SA TGQR  K+
Sbjct:  193 CESEKTGAMSAADFWGLGLGEPFPVSALHGVGTAEIMETIFDSIAEK-KTFDAEDRPEEINIAIIGRPNVGKSSLLNSIFGDTRAIVSEMAGTTRDSIDAVMERPPPPGSDDLSTIYRFVDTAGIRRKGK---VDFGPEFFMVNRALRAIRRADVVLLILDATSGVAEQDRVLAQKIADDGRACVIVCNKWDAVVDKDSTTYDKSVQYFREELPMIRWAPILFISAATGQRVGKI 423          
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: B8BTK0_THAPS (GTPase Der (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BTK0_THAPS)

HSP 1 Score: 252 bits (644), Expect = 9.510e-79
Identity = 125/232 (53.88%), Postives = 166/232 (71.55%), Query Frame = 1
Query:    1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYD-VDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRT-------YRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            C   K G    + FW LGLGEP+A+S LHG G  ++M+ + + +   +D   + ++ INVAI+GRPNVGKSSL+N +FG  R+IVSDV GTTRDSIDA+ ER           YR VDTAGIRRKGK   +++G EFFMVNRA +AIRRADVVLL++D  AG+T+QDRVLA ++  DGRACV++CNKWD V DK+ ++Y+++V Y R+ L  ++WA + F SA TGQR  K+
Sbjct:  125 CESDKNGAYLASQFWNLGLGEPFAVSALHGVGTAEVMEKMFDDIAKPLDGEDDTDEEINVAIIGRPNVGKSSLINTIFGSNRAIVSDVAGTTRDSIDAIMERPSSDPEGLPTIYRFVDTAGIRRKGK---IEFGPEFFMVNRALRAIRRADVVLLVLDATAGVTEQDRVLAQKISDDGRACVILCNKWDAVIDKDSSTYDQSVKYFREELPQIRWAPILFVSAATGQRVGKI 353          
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: K9W310_9CYAN (GTPase Der n=1 Tax=Crinalium epipsammum PCC 9333 TaxID=1173022 RepID=K9W310_9CYAN)

HSP 1 Score: 247 bits (631), Expect = 7.420e-77
Identity = 128/224 (57.14%), Postives = 162/224 (72.32%), Query Frame = 1
Query:    1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            C   + G VQ ++FW LGLGEP+ +SG+HG+G  ++++ +  +L  VD   E  + I VAIVGRPNVGKSSLLN L GE RSIVS + GTTRD+ID++ ER G TYRL+DTAGIRRK     V+YG+EFF +NRAFKAIRRADVVLL++DV  G+TDQD+ LA R+  +GRACVV+ NKWD VE  +   Y    +   + LS V+WAEV FTSA TGQR  K+
Sbjct:  122 CESPQQGLVQASEFWSLGLGEPFPMSGIHGNGTGELLEKLVTYLPSVDEIEETPE-IKVAIVGRPNVGKSSLLNALTGENRSIVSPISGTTRDAIDSVVERNGTTYRLIDTAGIRRKKN---VEYGSEFFGINRAFKAIRRADVVLLVIDVLDGVTDQDQKLAGRIAEEGRACVVIANKWDAVEKDSYTIYEHQANITTR-LSFVEWAEVIFTSALTGQRVDKI 340          
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A0G4FDK2_VITBC (GTPase Der n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FDK2_VITBC)

HSP 1 Score: 251 bits (640), Expect = 2.450e-76
Identity = 124/225 (55.11%), Postives = 161/225 (71.56%), Query Frame = 1
Query:    1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDV-DRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            C     G  Q  +FW LG GEP  +SG+ G G+ D++D V  H+  V D   ED++ +N+AI+GRPNVGKSSLLNRL GE R IVSDVPGTTRD+ID   ER GR YRLVDTAGIRR+ +       +EF+MVNRA +AI R+DV LL++DV  GI DQD  LA+++   G+AC+V+CNKWD V DK+D +Y+KAVDY R +L P++W+ + F SAKTGQR  ++
Sbjct:  293 CESPTKGITQAQEFWSLGFGEPHPVSGIQGTGVGDVLDKVVTHIPWVPDVEVEDDEEVNIAIIGRPNVGKSSLLNRLLGEQRVIVSDVPGTTRDAIDVELERQGRVYRLVDTAGIRRRSRV-LAGQDSEFYMVNRAERAIERSDVCLLLIDVVQGIADQDLKLAEKIVEAGKACLVLCNKWDAV-DKDDKTYDKAVDYIRTVLYPLRWSAIEFISAKTGQRVARI 515          
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A846AEB7_9CYAN (GTPase Der n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846AEB7_9CYAN)

HSP 1 Score: 243 bits (621), Expect = 2.220e-75
Identity = 123/224 (54.91%), Postives = 161/224 (71.88%), Query Frame = 1
Query:    1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            C   + G +Q A FW LG+GEP+ +SG+HG+G  ++++ + E+L  V    E +D I VAI+GRPNVGKSSLLN   G TRSIVS V GTTRD+ID +  RG +TYRLVDTAGIRRK +   V+YG EFF VNRAFKAIRR+DVVLL++D   G+T+QD+ LA R++ DGRAC++V NKWD +E  +   Y+   D + ++   + WAEV FTSA TGQR TK+
Sbjct:  122 CESPEQGLIQAAQFWELGIGEPYPVSGIHGNGTGELLEQLVEYLPPV-IADETDDEIRVAIIGRPNVGKSSLLNAFVGNTRSIVSPVSGTTRDAIDTVVTRGEQTYRLVDTAGIRRKKQ---VEYGTEFFSVNRAFKAIRRSDVVLLVIDAIDGVTEQDQKLAGRIEEDGRACIIVVNKWDAIEKDSHTIYDHKRDISAKLYF-MDWAEVIFTSALTGQRVTKI 340          
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A1C0V792_9CYAN (GTPase Der n=3 Tax=Limnothrix TaxID=132605 RepID=A0A1C0V792_9CYAN)

HSP 1 Score: 242 bits (618), Expect = 6.100e-75
Identity = 127/224 (56.70%), Postives = 158/224 (70.54%), Query Frame = 1
Query:    1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            C     G  Q + FW LGLGEP+A+SG+HG+G  D++D    +L  VD+  E E  +N+AIVGRPNVGKSSLLN   GE R+IVS + GTTRDSID + ER G+ YRL+DTAGIRRK   + +DYG EFF +NRAFKAIRR+DVVLL++DV  GIT+QD+ LA R+  DGRACV+V NKWD V DK+  S  +     R  L  + WAE+ FTSA TGQR  K+
Sbjct:  122 CESPDQGLAQASLFWELGLGEPFAVSGIHGNGTGDLLDAALRYLPPVDQLPE-EPELNIAIVGRPNVGKSSLLNAFVGENRAIVSPISGTTRDSIDMVVERNGKRYRLIDTAGIRRK---KMIDYGPEFFSINRAFKAIRRSDVVLLVIDVLDGITEQDQRLAGRITDDGRACVLVVNKWDAV-DKDSTSIYEYERELRSRLYFLDWAEMIFTSAVTGQRVPKI 340          
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Match: A0A1E5QEA2_9CYAN (GTPase Der n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QEA2_9CYAN)

HSP 1 Score: 242 bits (617), Expect = 9.090e-75
Identity = 123/224 (54.91%), Postives = 158/224 (70.54%), Query Frame = 1
Query:    1 CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRTAEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFERGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVDVEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQMLSPVKWAEVCFTSAKTGQRCTKV 672
            C   + G +Q A FW LG+GEP+ +SG+HG G+ D++D V +HL   D T E  +  NVAIVGRPNVGKSSLLN   GE R+IVS + GTTRD+ID + ER G+TYRL+DTAGIR+K   + V+YG EFF +NRAFKAIRRADVVLL++D   G T+QD+ LA R+  +GRACV+V NKWD VE K+  + N+     +  L  ++WAE  F SA TGQR  K+
Sbjct:  122 CESPEQGTIQAAQFWELGIGEPFPVSGIHGSGVGDLLDEVVQHLPPTDDTEEIRET-NVAIVGRPNVGKSSLLNAFLGENRAIVSPISGTTRDAIDTVVERDGKTYRLIDTAGIRKK---KGVEYGPEFFGINRAFKAIRRADVVLLVIDALDGATEQDQKLAGRIAEEGRACVIVVNKWDAVE-KDSYTLNEYERQLKNRLYFLEWAETIFVSALTGQRVAKI 340          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16276.4287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSM6_ECTSI3.060e-14491.96GTPase Der n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A836CJC9_9STRA9.690e-9863.76GTPase Der n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
W7TQC4_9STRA2.360e-8560.27GTPase Der n=2 Tax=Monodopsidaceae TaxID=425072 Re... [more]
B7FRD0_PHATC2.200e-7954.89GTPase Der n=2 Tax=Phaeodactylum tricornutum TaxID... [more]
B8BTK0_THAPS9.510e-7953.88GTPase Der (Fragment) n=1 Tax=Thalassiosira pseudo... [more]
K9W310_9CYAN7.420e-7757.14GTPase Der n=1 Tax=Crinalium epipsammum PCC 9333 T... [more]
A0A0G4FDK2_VITBC2.450e-7655.11GTPase Der n=1 Tax=Vitrella brassicaformis (strain... [more]
A0A846AEB7_9CYAN2.220e-7554.91GTPase Der n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2... [more]
A0A1C0V792_9CYAN6.100e-7556.70GTPase Der n=3 Tax=Limnothrix TaxID=132605 RepID=A... [more]
A0A1E5QEA2_9CYAN9.090e-7554.91GTPase Der n=2 Tax=unclassified Desertifilum TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16276contigL-elsbetiae_contig16276:299..3804 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score423.7
Seed ortholog evalue5.3e-116
Seed eggNOG ortholog2880.D8LSM6
KEGG rclassRC00053,RC00209,RC00870
KEGG koko:K03650,ko:K03977
KEGG ReactionR08701
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTP binding
EggNOG OGsCOG0486@1,KOG1191@2759
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03016
Exons6
Model size672
Cds size672
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16276.4287.1prot_L-elsbetiae_contig16276.4287.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16276 299..3804 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815671.8277502-CDS-L-elsbetiae_contig16276:298..3941622815671.8277502-CDS-L-elsbetiae_contig16276:298..394Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 299..394 +
1691683028.3214343-CDS-L-elsbetiae_contig16276:298..3941691683028.3214343-CDS-L-elsbetiae_contig16276:298..394Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 299..394 +
1622815671.8419933-CDS-L-elsbetiae_contig16276:1172..12821622815671.8419933-CDS-L-elsbetiae_contig16276:1172..1282Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 1173..1282 +
1691683028.3344018-CDS-L-elsbetiae_contig16276:1172..12821691683028.3344018-CDS-L-elsbetiae_contig16276:1172..1282Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 1173..1282 +
1622815671.854-CDS-L-elsbetiae_contig16276:1684..18441622815671.854-CDS-L-elsbetiae_contig16276:1684..1844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 1685..1844 +
1691683028.3524506-CDS-L-elsbetiae_contig16276:1684..18441691683028.3524506-CDS-L-elsbetiae_contig16276:1684..1844Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 1685..1844 +
1622815671.8643005-CDS-L-elsbetiae_contig16276:2292..24001622815671.8643005-CDS-L-elsbetiae_contig16276:2292..2400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 2293..2400 +
1691683028.3619545-CDS-L-elsbetiae_contig16276:2292..24001691683028.3619545-CDS-L-elsbetiae_contig16276:2292..2400Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 2293..2400 +
1622815671.8762157-CDS-L-elsbetiae_contig16276:2947..30521622815671.8762157-CDS-L-elsbetiae_contig16276:2947..3052Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 2948..3052 +
1691683028.3714547-CDS-L-elsbetiae_contig16276:2947..30521691683028.3714547-CDS-L-elsbetiae_contig16276:2947..3052Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 2948..3052 +
1622815671.8882565-CDS-L-elsbetiae_contig16276:3711..38041622815671.8882565-CDS-L-elsbetiae_contig16276:3711..3804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 3712..3804 +
1691683028.3813667-CDS-L-elsbetiae_contig16276:3711..38041691683028.3813667-CDS-L-elsbetiae_contig16276:3711..3804Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16276 3712..3804 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16276.4287.1

>prot_L-elsbetiae_contig16276.4287.1 ID=prot_L-elsbetiae_contig16276.4287.1|Name=mRNA_L-elsbetiae_contig16276.4287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=224bp
CAKQKYGEVQTADFWCLGLGEPWAISGLHGDGIYDMMDNVKEHLYDVDRT
AEDEDNINVAIVGRPNVGKSSLLNRLFGETRSIVSDVPGTTRDSIDAMFE
RGGRTYRLVDTAGIRRKGKARFVDYGNEFFMVNRAFKAIRRADVVLLMVD
VEAGITDQDRVLADRVQSDGRACVVVCNKWDLVEDKNDASYNKAVDYARQ
MLSPVKWAEVCFTSAKTGQRCTKV
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mRNA from alignment at L-elsbetiae_contig16276:299..3804+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16276.4287.1 ID=mRNA_L-elsbetiae_contig16276.4287.1|Name=mRNA_L-elsbetiae_contig16276.4287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3506bp|location=Sequence derived from alignment at L-elsbetiae_contig16276:299..3804+ (Laminarionema elsbetiae ELsaHSoW15)
TGTGCGAAACAGAAATACGGAGAGGTGCAGACGGCGGATTTCTGGTGCCT AGGGCTCGGCGAGCCGTGGGCAATTAGCGGTCTTCACGGCGACGGGGTAA GCTAACCCAGCCGTCCAGCACGCGTTGCGCTGTATGCAAGCGTCATCGAG TTATATTGACAAGCCCGTTGGCTTCCTTGTGCTCGCTTGGTGTTATTGCG GGGCCACAGAAAGTACGTCAATTTGTGGAAGTAGAAACATTGTCGTAGCT GAGAGAGAGAGAGTGCCTTCGGCAGGAGTAAGGCGTGTTCGTACTGCGCG TAGATGGAGCCGGGGGGGGGGGTGGTCTTTGCTCTTCATCTGGGCCTGTC TGCCCGTCCAGTGTACCTTTCGCAACCTGGAGTCACGTTACCCTTATCCT GTGTAGGTACGTCGTAGAACGTATGGTACCGTCGAAGGCCGACCCTCAGG AGTCACAAATCGCCCGCTCTTTTTGGGGCTCGCGAAGGAGGAGGGTCCGG GCGAGGCGCACCACAAGCGCCACACGCACCAAGATGTTTTATTTTAGCGC GCGCGTCGCTTTTAGATTTTTGATTTTTGAAGCCGCTGCCCTGCCGCATC CGCTTGTCTCTTCTGTTGTTATTTTCTCCTCTCGTGTCCCCACGTCCTCC TGTCAACTGTCGTGGGGATGGGGGGGGGGGGGGGGGGGGGGAGACAAACA AAAAGAGGGACAAGGGGGGGGGGGCCCCGGAAGACGCCGCCGGGACCGGG GGGGGGGGGAAAAAAANNNNNNNNNNTTTTCCTTTTTTTTTTCTCTTTCT TCCCTCCCGCCCCCCCGCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGCAGATCTACGACATGATGGACAACGTGAA GGAGCACCTGTACGACGTCGACCGGACCGCGGAGGACGAGGACAACATCA ACGTGGCCATCGTGGGGAGGCCCAACGTCGGAAAGTGAGCATTATTTAGC GCCGCACAAGGAAAAGGGACTACATACCAGTAGATGCTTTTGTAGCAGCC GGCAGGAAGTCTTGCCTGCTCTATTTTTTTTTTCATCGTCAACCGTTTGC TTGCGTGGCGGTCGTTTCCGCCCCTCTGCTTCGCAGAGCGGACGGCATGT GGTGCGATCGGTGTGGCCGGCATCATCGGCCTCACTAACATCATTGGAAT GATCCGTCTACACGTTGTTTATTTCTGCGTGTGAGGGCGTGTGTACTTGA CCTTTTTAGGGCGCCGAGTGCGCTGGCTGTCTCTCTGCGACATTGTGCTT TGCGTATTTATACACGCCGGCCCCCTTCAACTTGGCCTACCCCGCCCGCC CGTCCGTCCCCTCCCCTCTCCGTCCCTGACGGCCAGGTCAAGCCTCCTGA ACCGTCTCTTCGGGGAGACGCGGTCTATCGTCAGCGACGTGCCGGGCACC ACGCGCGACTCGATCGACGCCATGTTCGAGCGGGGGGGCCGGACCTACCG GCTCGTGGACACGGCGGGCATCCGCCGGAAGGGAAAGGCGAGATTTGTGT CCGCGTCAGAAGGATATTTATGTGTGTATCGGGAATATGTATCACTGCCT CTGCGTGATGATAAGCTCAGTTTGTGAAGGGGCGGAGGAGCTGACGTGCA AGCAGTGGCCCGTGAATCGAAGCTGGGGGGGGGGTAGTTGGGTGAAAGGA ATGGAGGATCCACATGTGCGCTCTCTCTTCACAGGGTTGAACGGTGGTGA ATCTTGGTGCCGTCTCGAAAAGCCCGTCGTGCGAGCGCACTCCTAGCTCT TGGCCTCTCTGCTCCTCTCTGCCCCGTCGCATGCCGGCGTTACTGCTGGT GGGGGGCTCTGCTTGTTGAAATCTGTGGTGGCTTCCTTCACGCGCAGAAG CCATACCTGTATAGCTTCGCAAGTCGCTTCGCCGGGTTTGAAGGCACAGG GCCTCCGACGGTGAAACGACGCCCGCTCTGTTTTACCCCTGCAGGTGGAC TACGGCAACGAGTTCTTCATGGTGAACCGAGCGTTCAAGGCCATCAGGCG AGCGGACGTGGTCCTCCTCATGGTGGATGTCGAGGCGGGCATCACAGACC AGGTAAGTGCGCCAAGACGCGATAGACAGGGTATGTTTTGGATCCAGAGA CCCGATCATCAGTGTTTTATGTCGACGGAGGTGGGTGGGGGACTCCACGC AAAAGCGTGTCGCGCTGCAGAAACCTTTTACAGTACGCGTGCAATTAATA GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCGCA CCTTGATCATTACACAGTAGGATTTTTGTATCGTGTTTTTATGGGGAAAC TCGGTGCCCTCCCTCCCTGTCTTCAGTTGTGATGGACGCCGAAAATCGAA ATTCGAGCGTGTGTGCCCCGGTTGCACTGCTGTTCCTGACGCCACTCTGC TGCTGCTGCTGCTGCTGGGCGGGCACCTTGATCATTACACAGTAAATCAG TACTTTTTGTATCGTGATTTTATAGAAAAACTCGGTGCCCTCCCTCCCTC CCTCCCTGCTTTCAGTTGTGATCGACGCCGAAAATCGAAATTCGAGCGTG TGCCCGTTTGGTTGCGCTGCTGCTGTATTGCTGACGCCACGTTGCCCAGG ACCGAGTGCTGGCGGACCGCGTCCAGTCGGACGGCCGTGCGTGCGTGGTG GTGTGCAACAAGTGGGATCTGGTGGAGGATAAGAACGACGCCAGCTACAA CAAGGTGCGGCGGGACGCATTCATTCACCGCCTGACGAAGTGCTGAGGGG ATCATCCCATCCCGTCCACTTCCCTTGTTCGCTCTTTAACGTGGAAAACC TGAGCAGGCCTATAAATACGCGAAAAGCGAGCGACATTATATTGATGGAT GGAAAATCTCTCACTGACCCCATTCGCGATTTCGCGATTTTTTTTCGCTC TTGATGGGTTTGGTTTTTTGAGGCGCGCTGGGATTCGAATGTCGCTGTCG TAGGTAGTCACTGATCGTGGCTTGTGGTGGTTTTTGGTGCAGGCGCTTGC AGTCCGGCGGGCGTGTTGCACGCAGCACGTTTTGTCCCCCTCCGTTTTCA AGCCCGATCGGTAGGAGACGACTCCCGTGATGGTAGGCTATCATATCCCA CCCAGCTCCTCCCACCAGGCCTAGCCCTGTCCTCTCAAGTCTGGAGTCGC CTCCGACTCCGTTCAGAAATGATTAGGACACCGAAGAAGCGGTTTCGTTG CGGACAAGGGAGCAAGCCGACAAACACATGAGTTTGTCGTCCATACATAC ACGTAGAAGGATCAAGCTTGTACTGTCACCTGTGTAGCGTTTCAGCTCCC TAGACTACTCAAATTCCTCTTGCTTTTTATTGTGTGCATGTACTTCTATC TCGTCCCTTTTAGGCGGTGGACTACGCGAGGCAGATGCTGTCGCCGGTGA AGTGGGCCGAGGTCTGTTTCACGTCCGCGAAGACGGGGCAGCGGTGCACC AAGGTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16276:299..3804+

>mRNA_L-elsbetiae_contig16276.4287.1 ID=mRNA_L-elsbetiae_contig16276.4287.1|Name=mRNA_L-elsbetiae_contig16276.4287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1344bp|location=Sequence derived from alignment at L-elsbetiae_contig16276:299..3804+ (Laminarionema elsbetiae ELsaHSoW15)
TGTGCGAAACAGAAATACGGAGAGGTGCAGACGGCGGATTTCTGGTGCCT
AGGGCTCGGCGAGCCGTGGGCAATTAGCGGTCTTCACGGCGACGGGTGTG
CGAAACAGAAATACGGAGAGGTGCAGACGGCGGATTTCTGGTGCCTAGGG
CTCGGCGAGCCGTGGGCAATTAGCGGTCTTCACGGCGACGGGATCTACGA
CATGATGGACAACGTGAAGGAGCACCTGTACGACGTCGACCGGACCGCGG
AGGACGAGGACAACATCAACGTGGCCATCGTGGGGAGGCCCAACGTCGGA
AAATCTACGACATGATGGACAACGTGAAGGAGCACCTGTACGACGTCGAC
CGGACCGCGGAGGACGAGGACAACATCAACGTGGCCATCGTGGGGAGGCC
CAACGTCGGAAAGTCAAGCCTCCTGAACCGTCTCTTCGGGGAGACGCGGT
CTATCGTCAGCGACGTGCCGGGCACCACGCGCGACTCGATCGACGCCATG
TTCGAGCGGGGGGGCCGGACCTACCGGCTCGTGGACACGGCGGGCATCCG
CCGGAAGGGAAAGGCGAGATTTGTCAAGCCTCCTGAACCGTCTCTTCGGG
GAGACGCGGTCTATCGTCAGCGACGTGCCGGGCACCACGCGCGACTCGAT
CGACGCCATGTTCGAGCGGGGGGGCCGGACCTACCGGCTCGTGGACACGG
CGGGCATCCGCCGGAAGGGAAAGGCGAGATTTGTGGACTACGGCAACGAG
TTCTTCATGGTGAACCGAGCGTTCAAGGCCATCAGGCGAGCGGACGTGGT
CCTCCTCATGGTGGATGTCGAGGCGGGCATCACAGACCAGGTGGACTACG
GCAACGAGTTCTTCATGGTGAACCGAGCGTTCAAGGCCATCAGGCGAGCG
GACGTGGTCCTCCTCATGGTGGATGTCGAGGCGGGCATCACAGACCAGGA
CCGAGTGCTGGCGGACCGCGTCCAGTCGGACGGCCGTGCGTGCGTGGTGG
TGTGCAACAAGTGGGATCTGGTGGAGGATAAGAACGACGCCAGCTACAAC
AAGGACCGAGTGCTGGCGGACCGCGTCCAGTCGGACGGCCGTGCGTGCGT
GGTGGTGTGCAACAAGTGGGATCTGGTGGAGGATAAGAACGACGCCAGCT
ACAACAAGGCGGTGGACTACGCGAGGCAGATGCTGTCGCCGGTGAAGTGG
GCCGAGGTCTGTTTCACGTCCGCGAAGACGGGGCAGCGGTGCACCAAGGT
AGCGGTGGACTACGCGAGGCAGATGCTGTCGCCGGTGAAGTGGGCCGAGG
TCTGTTTCACGTCCGCGAAGACGGGGCAGCGGTGCACCAAGGTA
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