prot_L-elsbetiae_contig16158.4232.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16158.4232.1
Unique Nameprot_L-elsbetiae_contig16158.4232.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length77
Homology
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BLAST of mRNA_L-elsbetiae_contig16158.4232.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 1.550e-23
Identity = 49/76 (64.47%), Postives = 56/76 (73.68%), Query Frame = 0 
Query:    1 VLERQKKREGYGDNVNSVFARTVRGHLQYLPGQAIGARGVGNQCKRGACFKELIDMCAGDGDEGIPRDVVLALLRH 76
            VL+RQK+R+  GDNV+ V ARTVR  LQYL  Q IGA G GNQC+RG CF   + M  G G EGIPRDVVLALLR+
Sbjct:  148 VLDRQKERDSQGDNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
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BLAST of mRNA_L-elsbetiae_contig16158.4232.1 vs. uniprot
Match: A0A6H5KKJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKJ8_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 4.080e-7
Identity = 24/66 (36.36%), Postives = 38/66 (57.58%), Query Frame = 0 
Query:   11 YGDNVNSVFARTVRGHLQYLPGQAIGARGVGNQCKRGACFKELIDMCAGDGDEGIPRDVVLALLRH 76
            Y D+     A+ VR  + Y   + +G  G GNQ K G C +    + AGDG++G+P +VV A+L++
Sbjct:   24 YKDDPGYCVAKRVRNQVYYDTAKDLGCFGRGNQLKAGECMRAATKVFAGDGNDGLPTEVVKAMLQY 89
[Close]
BLAST of mRNA_L-elsbetiae_contig16158.4232.1 vs. uniprot
Match: A0A6H5KG83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG83_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 7.880e-6
Identity = 25/66 (37.88%), Postives = 36/66 (54.55%), Query Frame = 0 
Query:   11 YGDNVNSVFARTVRGHLQYLPGQAIGARGVGNQCKRGACFKELIDMCAGDGDEGIPRDVVLALLRH 76
            Y D+     A+ VR    Y   + +G  G GNQ K G C      + AGDG++G+P +VV A+L+H
Sbjct:  115 YKDDPGYCVAKRVRNQGYYDTAKDLGCFGRGNQLKAGECMCAATKVFAGDGNDGLPTEVVKAMLQH 180
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16158.4232.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE1.550e-2364.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKJ8_9PHAE4.080e-736.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KG83_9PHAE7.880e-637.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16158contigL-elsbetiae_contig16158:2157..2387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16158.4232.1mRNA_L-elsbetiae_contig16158.4232.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16158 2157..2387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16158.4232.1 ID=prot_L-elsbetiae_contig16158.4232.1|Name=mRNA_L-elsbetiae_contig16158.4232.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=77bp
VLERQKKREGYGDNVNSVFARTVRGHLQYLPGQAIGARGVGNQCKRGACF
KELIDMCAGDGDEGIPRDVVLALLRH*
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