mRNA_L-elsbetiae_contig16145.4223.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16145.4223.1
Unique NamemRNA_L-elsbetiae_contig16145.4223.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: Q8QNB6_ESV1K (EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB6_ESV1K)

HSP 1 Score: 459 bits (1180), Expect = 2.280e-159
Identity = 224/320 (70.00%), Postives = 275/320 (85.94%), Query Frame = 1
Query:    1 DIFKAFKMCDETWIKRKRHLNTASLFNTLTRCCIQGRGVNHVIRMENESFSMQAVHYARKKVPAGAFREINSYIQRGPHENRVFAVDGSKVHVHPSFLKDGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRTEARCLVSGVEARLVKYFIAGKTYVCLTNNLSVNRARVKALYASRWRVEESFKRLKSNLKLEKAHALKSDLYIQEVEARVLLDTITLRLKQDNV--SYIFTLDTRVLSTLRRVVTMS 954
            +I+ AFK CD+ W++R+R ++T+SLF TLTRCC+QGRGVNHV++ME+E++S QAVH ARKK+P GAF+E+N ++ RGPHE RVFAVDGSKVHVHPSF+  GYKTRTND+PV RPAKRPLVMLSSMVDV+TK C+DF+LTKHFNER AAT++LRSV+KGDTL+FDRGY+S++LL SVH + AFG+WRLKI+AF G R+FFNS RTEA CL+ GV+ARL+KYFI GKTYVCLT + S++R ++K +YASRWRVEESFKRLKSNL+LEKAHA   DLYIQEVEARVLLDTITLR++      SY++TLDT V   LR V  +S
Sbjct:    8 EIYDAFKKCDQQWMQRRRKMDTSSLFYTLTRCCVQGRGVNHVLKMEDEAYSSQAVHSARKKLPMGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINAGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVQKGDTLLFDRGYYSKDLLHSVHGSHAFGVWRLKIDAFRGTRSFFNSCRTEATCLILGVKARLLKYFIDGKTYVCLTTDPSLSRLKIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVS 327          
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: D8LP47_ECTSI (EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP47_ECTSI)

HSP 1 Score: 457 bits (1177), Expect = 3.120e-159
Identity = 227/320 (70.94%), Postives = 271/320 (84.69%), Query Frame = 1
Query:    1 DIFKAFKMCDETWIKRKRHLNTASLFNTLTRCCIQGRGVNHVIRMENESFSMQAVHYARKKVPAGAFREINSYIQRGPHENRVFAVDGSKVHVHPSFLKDGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRTEARCLVSGVEARLVKYFIAGKTYVCLTNNLSVNRARVKALYASRWRVEESFKRLKSNLKLEKAHALKSDLYIQEVEARVLLDTITLRLKQDNV--SYIFTLDTRVLSTLRRVVTMS 954
            +I+ AFK CD  W++R+R L+T+SLF TLT+CCIQ RGV H++RMENE +S QA+H ARKK+P GAF+E+N ++QRGPHE RVFAVDGSKVHVHPSF+  GY TRTN+KPVPRPAKRPLVMLSSMVDV+TK CVDF+LTKHFNER AAT +LR V+KGDTLVFDRGY+S+ LLRSVH++ AFG+WRLKI+AF G R+FFNS RTEA CL+ G+EARL+KYFI GKTYVCLTN+ S++R  +K +YASRWRVEESFKRLKSNL+LEKAHA   DLYIQEVEARVLLDTITLR++      SY++TLDT V   LR V  +S
Sbjct:    8 EIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYMTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRGVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLRLEKAHARTPDLYIQEVEARVLLDTITLRMQGSTKESSYLYTLDTHVTYILRNVKRVS 327          
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: D8LP60_ECTSI (EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP60_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 6.120e-158
Identity = 228/320 (71.25%), Postives = 268/320 (83.75%), Query Frame = 1
Query:    1 DIFKAFKMCDETWIKRKRHLNTASLFNTLTRCCIQGRGVNHVIRMENESFSMQAVHYARKKVPAGAFREINSYIQRGPHENRVFAVDGSKVHVHPSFLKDGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRTEARCLVSGVEARLVKYFIAGKTYVCLTNNLSVNRARVKALYASRWRVEESFKRLKSNLKLEKAHALKSDLYIQEVEARVLLDTITLRLKQD--NVSYIFTLDTRVLSTLRRVVTMS 954
            +I+ AFK CD  W++R+R L+T+SLF TLT+CCIQ RGV H++RMENE +S QA+H ARKK+P GAF+E+N ++QRGPHE RVFAVDGSKVHVHPSF+  GY TRTN+KPVPRPAKRPLVMLSSMVDV+TK CVDF+LTKHFNER AAT +LR V+KGDTLVFDRGY+S+ LLRSVH++ AFG+WRLKINAF G R FFNS  TEA CL+ GV ARL+KYFI+GKTYVCLTN+LS++R  +K +YASRWRVEES KRLKSNLKLEKAHA    LYIQEVEARVLLDTITLRL++     SYI+TLDT V   L  V  +S
Sbjct:    8 EIYDAFKKCDGQWMQRRRKLDTSSLFYTLTKCCIQERGVAHILRMENEQYSSQAIHSARKKLPPGAFKEVNRFLQRGPHEPRVFAVDGSKVHVHPSFIGAGYVTRTNNKPVPRPAKRPLVMLSSMVDVKTKACVDFELTKHFNERKAATEMLRCVRKGDTLVFDRGYYSKNLLRSVHDSHAFGVWRLKINAFKGTRPFFNSCHTEATCLILGVRARLLKYFISGKTYVCLTNDLSLSRRDIKVMYASRWRVEESLKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRLQKSIKEPSYIYTLDTYVTHILNNVKRVS 327          
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: A0A6H5K772_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K772_9PHAE)

HSP 1 Score: 455 bits (1170), Expect = 9.790e-153
Identity = 222/316 (70.25%), Postives = 273/316 (86.39%), Query Frame = 1
Query:   13 AFKMCDETWIKRKRHLNTASLFNTLTRCCIQGRGVNHVIRMENESFSMQAVHYARKKVPAGAFREINSYIQRGPHENRVFAVDGSKVHVHPSFLKDGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRTEARCLVSGVEARLVKYFIAGKTYVCLTNNLSVNRARVKALYASRWRVEESFKRLKSNLKLEKAHALKSDLYIQEVEARVLLDTITLRLKQDNV--SYIFTLDTRVLSTLRRVVTMS 954
            +++ CD+ WI+R+R ++T+SLF TLTRCC+QGRGV+HV++ME+E++S QAVH ARKK+P GAF+E+N ++ RGPHE RVFAVDGSKVHVHPSF+  GYKTRTND+PV RPAKRPLVMLSSMVDV+TK C+DF+LTKHFNER AAT++LRSV+KGDTL+FDRGY+S++LLRSVH++ AFG+WRLKI+AF G R+FFNS RTEA CL+ G+EARL+KYFI GKTYVCLTN+ S++R  +K +YASRWRVEESFKRLKSNLKLEKAHA    LYIQEVEARVLLDTITLR++      SY++TLDT V   LR V  +S
Sbjct:   27 SYQKCDQQWIQRRRKMDTSSLFFTLTRCCVQGRGVSHVLKMEDEAYSSQAVHSARKKLPIGAFKEVNRFLHRGPHEPRVFAVDGSKVHVHPSFINSGYKTRTNDQPVSRPAKRPLVMLSSMVDVKTKACIDFELTKHFNERRAATSMLRSVRKGDTLLFDRGYYSKDLLRSVHDSHAFGVWRLKIDAFKGTRSFFNSCRTEAACLILGIEARLLKYFIDGKTYVCLTNDPSLSRRDIKTMYASRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVS 342          
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 4.120e-136
Identity = 206/320 (64.38%), Postives = 256/320 (80.00%), Query Frame = 1
Query:    1 DIFKAFKMCDETWIKRKRHLNTASLFNTLTRCCIQGRGVNHVIRMENESFSMQAVHYARKKVPAGAFREINSYIQRGPHENRVFAVDGSKVHVHPSFLKDGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRTEARCLVSGVEARLVKYFIAGKTYVCLTNNLSVNRARVKALYASRWRVEESFKRLKSNLKLEKAHALKSDLYIQEVEARVLLDTITLRLKQDNV--SYIFTLDTRVLSTLRRVVTMS 954
            +I+ AFK CD  W++R+R L+T+S+F T+T+CC + RGV+HV++ME E +S QAVH ARKK+P GAF+E+N ++ RGPHE R+FA+DGSKVHVHPSF+K GYKTRTNDKPVPRPAKRPLVMLSSMVDVRTK+C+DF+LTKHF+ER AA ++LRSV+K DTL+FDRGY+S++LLRSVH++GAFG+WRL+I                  CL+ GV  RL+KYFI GKTYVCLTN+ S++R  +K +YA RWRVEESFKRLKSNLKLEKAHA    LYIQEVEARVLLDTITLR++      SY++TLDT V   LR V  +S
Sbjct:    8 EIYDAFKKCDAQWMQRRRKLDTSSVFYTITKCCTRERGVSHVLKMEAEEYSSQAVHLARKKLPIGAFKEVNRFLHRGPHEPRIFAIDGSKVHVHPSFIKAGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKSCIDFELTKHFDERRAAVSMLRSVRKSDTLLFDRGYYSKDLLRSVHDSGAFGVWRLRIMP----------------CLILGVRVRLLKYFIKGKTYVCLTNDPSLSRRDIKTMYAWRWRVEESFKRLKSNLKLEKAHAKTPALYIQEVEARVLLDTITLRMQSSTKESSYLYTLDTHVTHILRNVKRVS 311          
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: A0A6H5K0K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0K9_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 6.020e-104
Identity = 160/250 (64.00%), Postives = 193/250 (77.20%), Query Frame = 1
Query:  133 MENESFSMQAVHYARKKVPAGAFREINSYIQRGPHENRVFAVDGSKVHVHPSFLKDGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRTEARCLVSGVEARLVKYFIAGKTYVCLTNNLSVNRARVKALYASRWRVEESFKRLKSNLKLEKAHALKSDLYIQEVEARVLLDTITLRLKQ 882
            M NE +S QA+H ARKK+P GAF+E+N ++ +GPHE RVFAVDGSKVHVHPSF+  GYKTRTNDKPVPRPAK PLVMLSSMVDV+TK CVDF+LTKHFNE                   D      + LRS+H++ AFG+WRLKINAF G ++F +S RTE  CL+ GV++RLVKY I GKTYVCLTN+ +++R  +KA+YASRWR E+S  RLKSN++LEKAHA   DLYIQEVEARVLLDTITLRL++
Sbjct:    1 MGNEQYSSQAIHLARKKLPVGAFKEVNRFLHQGPHEPRVFAVDGSKVHVHPSFIGAGYKTRTNDKPVPRPAKSPLVMLSSMVDVKTKACVDFELTKHFNE-------------------DGSRIYTQKLRSIHDSQAFGVWRLKINAFKGTKSFISSWRTETTCLILGVQSRLVKYSINGKTYVCLTNDPTLSRRDIKAIYASRWRGEQSL-RLKSNVRLEKAHARTPDLYIQEVEARVLLDTITLRLQR 230          
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: A0A6H5K4T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4T1_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 8.920e-32
Identity = 79/169 (46.75%), Postives = 100/169 (59.17%), Query Frame = 1
Query:   40 IKRKRHLNTASLFNTLTRCCIQGRGVNHVIRMENESFSMQAVHYARKKVPAGAFREINSYIQRGPHENRVFAVDGSKVHVHPSFLKDGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAF 546
            I+R+R ++T+SLF TLT+ CIQ RGV H++R ++E +S QAVH ARKK+PAGAF+E                                        PVPRPA RPLVMLSSMVD           TK FNER A  ++LRSV +GDTLVFD+ Y+SR LLR+VH++ AF
Sbjct:  175 IQRRRKIDTSSLFYTLTKRCIQERGVGHILRTDDEQYSSQAVHSARKKLPAGAFKE----------------------------------------PVPRPATRPLVMLSSMVD-----------TKLFNERKADVSMLRSVHQGDTLVFDKEYYSRGLLRNVHDSKAF 292          
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: UPI001E2BA685 (IS4 family transposase n=1 Tax=Marinobacter gelidimuriae TaxID=2739064 RepID=UPI001E2BA685)

HSP 1 Score: 107 bits (268), Expect = 2.500e-22
Identity = 93/328 (28.35%), Postives = 144/328 (43.90%), Query Frame = 1
Query:   28 DETWIKRKRHLNTASLFNTLTRCCIQGRGVNHVIRM---------------ENESFSMQAVHYARKKVPAGAFREINSYIQR---GPHEN------RVFAVDGSKVHVHPSFLKDGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRTE---------------------ARCLVSGVEARLVKYFIAGKTYVCLTNNLSVNRARVKAL---YASRWRVEESFKRLKSNLKLEKAHALKSDLYIQEVEARVLLDTIT 867
            D  W KR+R LNT  +   + R         + I +               +    +  A   AR K+    F+ +++ I +    P  N      R++AVDGSK+++    L  GY+T +++      A  P   LS +  ++TKT VDF+L  H +ER  A   L S+ + D +V+DRGYFS  +L      G   ++R+K  A   V     S  T+                     A C    +  R+VKY +AG TY+  T  L   + R++ L   Y SRW +EE +K  K  +K+E+ H        QE+ A  +L T+T
Sbjct:  274 DRQWQKRQRVLNTLLIMLFIFRLVFSHNKQGYAITIAELWDQCRTMNIPLPQATPVAPSAFCNARAKLDENIFKILHAEILQHYDSPSNNDRWQAHRIYAVDGSKINLPRQLLNHGYRTPSDN------AHYPQGTLSCLYQLKTKTPVDFELAAHADERKLALRHLASLSENDVVVYDRGYFSYGMLYEHRKYGIHSIFRMKTKASKAVDNVIASSATDKIIQVIPSKDVKMTLRERYPDAHC--GPITLRVVKYTVAGTTYILGTTLLDQQKYRIEDLSNVYHSRWGIEELYKISKQLMKIEEFHGQSERGVKQELYAHFVLITLT 593          
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: A0A6L8GJ11_9BACT (IS4 family transposase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L8GJ11_9BACT)

HSP 1 Score: 97.4 bits (241), Expect = 9.520e-19
Identity = 92/324 (28.40%), Postives = 142/324 (43.83%), Query Frame = 1
Query:   28 DETWIKRKRHLNTASLFNTLTRCCIQGRGVNH---------------VIRMENESFSMQAVHYARKKVPAGAFREINSYIQRGPHEN------RVFAVDGSKVHVHPSFLKDGYKTRTNDKPVPRP-AKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRTEARCLVSG-------------------VEARLVKYFIAGKTYVCLTNNLS---VNRARVKALYASRWRVEESFKRLKSNLKLEKAHALKSDLYIQEVEARVLLDTIT 867
            D  W+KR+R LN+  +   + R  +  R   +               +   + E     ++  AR++V    F +++  I R   +       RVFAVDG+K+++    +  GY       P+P+  A  P  ++S +  + TK  VDF L+    ERTAA   L +++ GD +VFDRGYFS ELL +V  TGA  ++RL+ N     R F     TEA    S                    V+ RLV+    G  +   T  L    V+   + ALY  RW +EE +K  K  + +++ H        QE+ A   L  +T
Sbjct:  342 DRRWMKRRRVLNSLIVMLFVFRLVLSRREKGYATVTAELWEQCRKLGIALPQREPVVASSICKARQRVHEELFLDLHREILRHGGDGARWKGRRVFAVDGTKMNLPRGLVDAGY-------PLPKDGAHYPQGLVSCLYRLDTKVPVDFSLSARACERTAALGHLHALEAGDVVVFDRGYFSFELLHAVIRTGAHPVFRLQANGVAAFRDFMAGDGTEAVVAASPGPDTRRELARRRPGERFDPVDVRLVRCRTGGDGFNLATTLLDADDVSADDLGALYQGRWSIEELYKVSKQTVAVDEFHGRTERGVRQELYAHFNLIAMT 658          
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Match: X0XGX0_9ZZZZ (DDE_Tnp_1 domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0XGX0_9ZZZZ)

HSP 1 Score: 92.4 bits (228), Expect = 2.240e-18
Identity = 71/217 (32.72%), Postives = 101/217 (46.54%), Query Frame = 1
Query:  289 FLKDGYKTRTNDKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKKGDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRT---------------------EARCLVSGVEARLVKYFIAGKTYVCLTNNLSVNRARVKAL---YASRWRVEESFKRLKSNLKLEKAHALKSDLYIQEVEARVLLDTIT 867
             L  GY+T +++      A  P  +LS +  ++TK  VDFDL  H +ER  A T L S+ + D +V+DRGYFS  +L      G   ++R+K  A   V  F  S  T                     EA C    +  R+VKY +AG TY+  T  L   R  ++ L   Y SRW VEE +K  K  +++E  H        QE+ A  +L T+T
Sbjct:    7 LLSSGYRTPSDN------AHYPQGLLSCLYQLKTKIPVDFDLVAHADERKLALTHLASLSENDVVVYDRGYFSYAMLYEHRKQGIHPIFRMKSKASSAVDKFIASSETDKVVQILPSKESKIGLRAKYPEASC--QPIPLRVVKYTVAGTTYILGTTLLDQQRYTIENLSNVYHSRWGVEELYKISKQLMRIEDFHGKSERGVKQELYAHFILITLT 215          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16145.4223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
Q8QNB6_ESV1K2.280e-15970.00EsV-1-170 n=2 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LP47_ECTSI3.120e-15970.94EsV-1-170 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LP60_ECTSI6.120e-15871.25EsV-1-155 (Partial) (Fragment) n=1 Tax=Ectocarpus ... [more]
A0A6H5K772_9PHAE9.790e-15370.25DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JA56_9PHAE4.120e-13664.38DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K0K9_9PHAE6.020e-10464.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K4T1_9PHAE8.920e-3246.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001E2BA6852.500e-2228.35IS4 family transposase n=1 Tax=Marinobacter gelidi... [more]
A0A6L8GJ11_9BACT9.520e-1928.40IS4 family transposase n=1 Tax=Acidobacteria bacte... [more]
X0XGX0_9ZZZZ2.240e-1832.72DDE_Tnp_1 domain-containing protein (Fragment) n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16145contigL-elsbetiae_contig16145:2879..3832 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score110.2
Seed ortholog evalue1.8e-21
Seed eggNOG ortholog1046724.KB889834_gene1048
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG3385 FOG Transposase and inactivated derivatives
EggNOG OGs1MVRM@1224,1RRFT@1236,464GA@72275,COG3385@1,COG3385@2
COG Functional cat.L
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size954
Cds size933
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815667.187848-CDS-L-elsbetiae_contig16145:2878..38111622815667.187848-CDS-L-elsbetiae_contig16145:2878..3811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16145 2879..3811 -
1691683025.4227872-CDS-L-elsbetiae_contig16145:2878..38111691683025.4227872-CDS-L-elsbetiae_contig16145:2878..3811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16145 2879..3811 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815667.200946-UTR-L-elsbetiae_contig16145:3811..38321622815667.200946-UTR-L-elsbetiae_contig16145:3811..3832Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig16145 3812..3832 -
1691683025.4331174-UTR-L-elsbetiae_contig16145:3811..38321691683025.4331174-UTR-L-elsbetiae_contig16145:3811..3832Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig16145 3812..3832 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16145.4223.1prot_L-elsbetiae_contig16145.4223.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16145 2879..3811 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16145.4223.1

>prot_L-elsbetiae_contig16145.4223.1 ID=prot_L-elsbetiae_contig16145.4223.1|Name=mRNA_L-elsbetiae_contig16145.4223.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=311bp
MCDETWIKRKRHLNTASLFNTLTRCCIQGRGVNHVIRMENESFSMQAVHY
ARKKVPAGAFREINSYIQRGPHENRVFAVDGSKVHVHPSFLKDGYKTRTN
DKPVPRPAKRPLVMLSSMVDVRTKTCVDFDLTKHFNERTAATTLLRSVKK
GDTLVFDRGYFSRELLRSVHNTGAFGLWRLKINAFGGVRTFFNSQRTEAR
CLVSGVEARLVKYFIAGKTYVCLTNNLSVNRARVKALYASRWRVEESFKR
LKSNLKLEKAHALKSDLYIQEVEARVLLDTITLRLKQDNVSYIFTLDTRV
LSTLRRVVTMS
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mRNA from alignment at L-elsbetiae_contig16145:2879..3832-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16145.4223.1 ID=mRNA_L-elsbetiae_contig16145.4223.1|Name=mRNA_L-elsbetiae_contig16145.4223.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=954bp|location=Sequence derived from alignment at L-elsbetiae_contig16145:2879..3832- (Laminarionema elsbetiae ELsaHSoW15)
GATATTTTCAAGGCCTTTAAGATGTGCGACGAGACGTGGATAAAAAGAAA GCGCCATCTGAACACCGCCTCGCTTTTCAACACCCTTACGAGATGTTGTA TTCAAGGGCGTGGGGTCAACCACGTCATTCGTATGGAAAACGAAAGCTTC TCGATGCAAGCTGTACACTATGCAAGAAAGAAAGTGCCCGCCGGAGCCTT CAGAGAAATAAACTCATACATACAGAGGGGCCCACACGAAAACAGGGTGT TTGCCGTCGACGGCTCAAAGGTGCATGTACACCCCTCCTTTCTCAAAGAC GGTTACAAAACAAGGACAAACGACAAACCCGTACCTAGACCGGCAAAGAG GCCTCTTGTAATGCTTTCTTCTATGGTCGACGTGCGGACTAAAACGTGCG TCGATTTCGATCTCACAAAGCATTTCAACGAGAGGACAGCCGCCACCACC CTTCTGCGTAGCGTAAAAAAAGGAGACACTCTTGTTTTTGATCGGGGGTA CTTCTCCAGAGAGCTATTGCGAAGCGTTCACAATACTGGTGCTTTTGGTC TGTGGAGGTTAAAGATAAACGCTTTCGGAGGGGTACGAACGTTCTTTAAC TCACAGAGGACCGAAGCTAGATGCTTGGTATCTGGTGTAGAGGCGAGGCT TGTTAAGTATTTCATCGCGGGAAAAACCTATGTGTGCCTGACAAACAACC TCTCTGTCAACAGAGCAAGGGTGAAAGCACTCTACGCTTCGAGGTGGAGA GTAGAGGAGAGCTTCAAGAGACTCAAATCAAACCTCAAACTGGAGAAGGC GCATGCCCTCAAATCTGACTTGTACATTCAGGAGGTAGAGGCACGAGTGC TTCTGGACACCATTACTCTTCGGTTGAAACAAGACAACGTATCGTATATT TTTACACTTGATACGAGAGTTCTATCAACTTTACGCAGAGTTGTTACTAT GTCA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16145:2879..3832-

>mRNA_L-elsbetiae_contig16145.4223.1 ID=mRNA_L-elsbetiae_contig16145.4223.1|Name=mRNA_L-elsbetiae_contig16145.4223.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1866bp|location=Sequence derived from alignment at L-elsbetiae_contig16145:2879..3832- (Laminarionema elsbetiae ELsaHSoW15)
ATGTGCGACGAGACGTGGATAAAAAGAAAGCGCCATCTGAACACCGCCTC
GCTTTTCAACACCCTTACGAGATGTTGTATTCAAGGGCGTGGGGTCAACC
ACGTCATTCGTATGGAAAACGAAAGCTTCTCGATGCAAGCTGTACACTAT
GCAAGAAAGAAAGTGCCCGCCGGAGCCTTCAGAGAAATAAACTCATACAT
ACAGAGGGGCCCACACGAAAACAGGGTGTTTGCCGTCGACGGCTCAAAGG
TGCATGTACACCCCTCCTTTCTCAAAGACGGTTACAAAACAAGGACAAAC
GACAAACCCGTACCTAGACCGGCAAAGAGGCCTCTTGTAATGCTTTCTTC
TATGGTCGACGTGCGGACTAAAACGTGCGTCGATTTCGATCTCACAAAGC
ATTTCAACGAGAGGACAGCCGCCACCACCCTTCTGCGTAGCGTAAAAAAA
GGAGACACTCTTGTTTTTGATCGGGGGTACTTCTCCAGAGAGCTATTGCG
AAGCGTTCACAATACTGGTGCTTTTGGTCTGTGGAGGTTAAAGATAAACG
CTTTCGGAGGGGTACGAACGTTCTTTAACTCACAGAGGACCGAAGCTAGA
TGCTTGGTATCTGGTGTAGAGGCGAGGCTTGTTAAGTATTTCATCGCGGG
AAAAACCTATGTGTGCCTGACAAACAACCTCTCTGTCAACAGAGCAAGGG
TGAAAGCACTCTACGCTTCGAGGTGGAGAGTAGAGGAGAGCTTCAAGAGA
CTCAAATCAAACCTCAAACTGGAGAAGGCGCATGCCCTCAAATCTGACTT
GTACATTCAGGAGGTAGAGGCACGAGTGCTTCTGGACACCATTACTCTTC
GGTTGAAACAAGACAACGTATCGTATATTTTTACACTTGATACGAGAGTT
CTATCAACTTTACGCAGAGTTGTTACTATGTCAATGTGCGACGAGACGTG
GATAAAAAGAAAGCGCCATCTGAACACCGCCTCGCTTTTCAACACCCTTA
CGAGATGTTGTATTCAAGGGCGTGGGGTCAACCACGTCATTCGTATGGAA
AACGAAAGCTTCTCGATGCAAGCTGTACACTATGCAAGAAAGAAAGTGCC
CGCCGGAGCCTTCAGAGAAATAAACTCATACATACAGAGGGGCCCACACG
AAAACAGGGTGTTTGCCGTCGACGGCTCAAAGGTGCATGTACACCCCTCC
TTTCTCAAAGACGGTTACAAAACAAGGACAAACGACAAACCCGTACCTAG
ACCGGCAAAGAGGCCTCTTGTAATGCTTTCTTCTATGGTCGACGTGCGGA
CTAAAACGTGCGTCGATTTCGATCTCACAAAGCATTTCAACGAGAGGACA
GCCGCCACCACCCTTCTGCGTAGCGTAAAAAAAGGAGACACTCTTGTTTT
TGATCGGGGGTACTTCTCCAGAGAGCTATTGCGAAGCGTTCACAATACTG
GTGCTTTTGGTCTGTGGAGGTTAAAGATAAACGCTTTCGGAGGGGTACGA
ACGTTCTTTAACTCACAGAGGACCGAAGCTAGATGCTTGGTATCTGGTGT
AGAGGCGAGGCTTGTTAAGTATTTCATCGCGGGAAAAACCTATGTGTGCC
TGACAAACAACCTCTCTGTCAACAGAGCAAGGGTGAAAGCACTCTACGCT
TCGAGGTGGAGAGTAGAGGAGAGCTTCAAGAGACTCAAATCAAACCTCAA
ACTGGAGAAGGCGCATGCCCTCAAATCTGACTTGTACATTCAGGAGGTAG
AGGCACGAGTGCTTCTGGACACCATTACTCTTCGGTTGAAACAAGACAAC
GTATCGTATATTTTTACACTTGATACGAGAGTTCTATCAACTTTACGCAG
AGTTGTTACTATGTCA
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