mRNA_L-elsbetiae_contig1614.4217.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: D8LTG8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTG8_ECTSI) HSP 1 Score: 686 bits (1771), Expect = 1.070e-239 Identity = 423/631 (67.04%), Postives = 480/631 (76.07%), Query Frame = 2 Query: 53 RRITGARVANRGANYPLLGLAFIGLAIAKLLSVYWEMEKRLPKSSFGSEGCTRYRNMMSPEDIIPVFEGVFVTSSDERRQSMMRSIGAEAAPWGDLFAIWNVDTPGQDPKTALLEIEGFPEGTAFHPHGIHYRPETEELFVVNHAYSQGGERIDVFKVTPNFPQEALPSIHPSLLETTXXXXXXXXXXXXXXXXXXXAAVDTGVAHAVPGSQGDDGVEGGAGPAGAGXDSSVXXXXXXXXXXXXXXXXXXXXXXAGTDGVTISAENEDAKVEAVAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKGLARGGSPVKLTYSFTVEHDAITTNYGVLNDLVLVDDDELYVTQYVAWRLPLHGPTQPDSILEYLRLCGSTLGWLLQMSPAPIIRCTGIRGPDMDCQNLARGRGVMYNGIALSPNGERLLVADTLAMQMMVFNRSLETGELALRQRLDLPGAPDNLEIDPYRAAEGVEAYTVGLVRASDFMKYAVTMDGAAHPSDGDDIKMAGGVASVVYNKDSGKRQLKASIARRISRYESSLEMWQDGSLLSISSAASTASGARLVGSAVEEGFLLCRPPPCPPGDGGSEA---GGLCPWG 1936 RRITG +VA+RG NYPLLGLA IGLA+AKL +VYWEME+R+PK+SFG+EGCTRYR+MMSPEDIIPVFEGVFV SSDERRQ +M+SIGAEAAPWGDLFAIW+VDTPGQDPK+A+LEIEGFPEG AFHPHG+HYR ET ELFVVNHAYSQGGERIDVFKV+ FPQ+ALP +HPSLLE T VD GVA AV G DD G G G +++V XXXXX +D V+ E E + +A E XXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+G +P+ LTYSF+VEH+ ITTNYGVLNDLVLVDDDELYVTQ++A R PLHGPTQPD +LE+LRL GS L +LQ+SPAPIIRCTGIRG D+DC+ LA+GRG MYNGIAL+PNGERLLV+DT AMQM++FNRS+ETG L LRQRLDLPG+PDNLEID YRAAEGVEAYTVGL+RA+DF KY+ M GA P+DGDDIKMAGG AS+V++++SGK YESSLEMW DGSLLSISSAASTASGAR++GSAVEEG+LLCRPPPCP G EA G CPWG Sbjct: 9 RRITGQKVASRGVNYPLLGLALIGLAVAKLATVYWEMEQRVPKTSFGTEGCTRYRDMMSPEDIIPVFEGVFVASSDERRQFVMQSIGAEAAPWGDLFAIWDVDTPGQDPKSAVLEIEGFPEGNAFHPHGMHYRAETGELFVVNHAYSQGGERIDVFKVSETFPQDALPPVHPSLLELTPPQEEDEEGKSD--------VVDIGVATAVLGDDEDDEGVQAEGGDGLGGEATVGEHEGGGGASLSGDDXXXXXV---SDDVSSENEVESDRADAAVE---XXXXXXXXXVVESPKEMAKRLKREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGQTPITLTYSFSVEHELITTNYGVLNDLVLVDDDELYVTQFMAMRHPLHGPTQPDGVLEHLRLYGSMLLLMLQISPAPIIRCTGIRGADIDCERLAKGRGAMYNGIALNPNGERLLVSDTAAMQMLIFNRSVETGALRLRQRLDLPGSPDNLEIDLYRAAEGVEAYTVGLIRATDFAKYSAAMGGATDPTDGDDIKMAGGFASIVFDQESGK-------------YESSLEMWHDGSLLSISSAASTASGARVMGSAVEEGYLLCRPPPCPLGS--QEAATDGTTCPWG 610
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: A0A6H5JRR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR5_9PHAE) HSP 1 Score: 628 bits (1620), Expect = 1.430e-217 Identity = 371/614 (60.42%), Postives = 430/614 (70.03%), Query Frame = 2 Query: 50 VRRITGARVANRGANYPLLGLAFIGLAIAKLLSVYWEMEKRLPKSSFGSEGCTRYRNMMSPEDIIPVFEGVFVTSSDERRQSMMRSIGAEAAPWGDLFAIWNVDTPGQDPKTALLEIEGFPEGTAFHPHGIHYRPETEELFVVNHAYSQGGERIDVFKVTPNFPQEALPSIHPSLLETTXXXXXXXXXXXXXXXXXXXAAVDTGVAHAVPGSQGDDGVEGGAGPAGAGXDSSVXXXXXXXXXXXXXXXXXXXXXXAGTDGVTISAENEDAKVEAVAEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKGLARGGSPVKLTYSFTVEHDAITTNYGVLNDLVLVDDDELYVTQYVAWRLPLHGPTQPDSILEYLRLCGSTLGWLLQMSPAPIIRCTGIRGPDMDCQNLARGRGVMYNGIALSPNGERLLVADTLAMQMMVFNRSLETGELALRQRLDLPGAPDNLEIDPYRAAEGVEAYTVGLVRASDFMKYAVTMDGAAHPSDGDDIKMAGGVASVVYNKDSGKRQLKASIARRISRYESSLEMWQDGSLLSISSAASTASGARLVGSAVEEGFLLCRPPPCP 1891 +RRITG +VA+RG NYPLLGLA IGLA+AKL +VYWEME+R+PK+SFG+EGCTRYR+MMSPEDIIP+FEGVFV SSDERRQ++M+SIGAEAAPWGDLFAIW+VDTPGQDPK+A+LEIEGFPEG AFHPHG+HYR ET ELFVVNHAYSQGGERIDVFKV+ FPQ+ALP + + E AK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LA+G +P+ LTYSF+VEH+ ITTN+GVLNDLVLVDDDELYVTQ++A R PLHGPTQPD +LE+LRL GS L +LQ+SPAPIIRCTGIRG D+DC+ LA+GRG MYNGIA+SPNGERLLV+DT+AMQM++FNRS+ETG L LRQRLDLPG+PDN+EID +RA EG+EAYTVGL+RA+DF KY+ M GA P+DGDDIKMAGG AS+V++++SG YES+LEMW DGSLLSISSA STASGARL+GSAVEEG+LLCRPPPCP Sbjct: 54 LRRITGQKVASRGVNYPLLGLALIGLAVAKLATVYWEMEQRVPKTSFGTEGCTRYRDMMSPEDIIPIFEGVFVASSDERRQTIMQSIGAEAAPWGDLFAIWDVDTPGQDPKSAVLEIEGFPEGNAFHPHGMHYRAETGELFVVNHAYSQGGERIDVFKVSETFPQDALPR-------------------------------------------------------------------------------RTRREEXXXXXXVVESPKEMAK----------------------------RLKREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAKGQTPITLTYSFSVEHELITTNFGVLNDLVLVDDDELYVTQFLAMRHPLHGPTQPDGVLEHLRLYGSILLLMLQISPAPIIRCTGIRGADIDCERLAKGRGAMYNGIAISPNGERLLVSDTVAMQMLIFNRSVETGALRLRQRLDLPGSPDNVEIDLFRATEGIEAYTVGLIRATDFAKYSAAMVGATDPTDGDDIKMAGGFASIVFDQESGN-------------YESNLEMWHDGSLLSISSAVSTASGARLMGSAVEEGYLLCRPPPCP 547
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: I2CS19_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CS19_NANGC) HSP 1 Score: 68.9 bits (167), Expect = 1.650e-10 Identity = 28/50 (56.00%), Postives = 38/50 (76.00%), Query Frame = 2 Query: 380 KTALLEIEGFPEGTAFHPHGIHYRPETEELFVVNHAYSQGGERIDVFKVT 529 + A + + FP+G AFHPHG++Y T +LFV+NHAY +GGERIDVF +T Sbjct: 9 RVASIPLLDFPKGVAFHPHGMYYHRPTSKLFVINHAYDKGGERIDVFHLT 58
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: A0A7S4IRR6_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IRR6_9EUKA) HSP 1 Score: 74.3 bits (181), Expect = 2.090e-10 Identity = 41/116 (35.34%), Postives = 59/116 (50.86%), Query Frame = 2 Query: 185 SFGSEGCTRYRNMMSPEDIIPVFEGVFVTSSDERRQSMMRSIGAEAAPWGDLFAIWNVDTPGQDPKTALLEIEGFPEGTAFHPHGIHYRPETEE--LFVVNHAYSQGGERIDVFKV 526 S ++ C ++ ED V E + + SD+R + G E G L ++ + + K A L +E FP FHPHGIH + LFV+NHAY+ GGER+DVF+V Sbjct: 33 SQNADECQLLEGIVGAEDSAIVSERIVIFGSDDRMTLWEKKGGMEIVQNGSLVVVFAAENG--ETKVATLSLENFPTDVDFHPHGIHLLRNNNQMLLFVINHAYTAGGERVDVFEV 146
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: A0A4D9CTG9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTG9_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 9.930e-10 Identity = 41/121 (33.88%), Postives = 63/121 (52.07%), Query Frame = 2 Query: 233 EDIIPVFEGVFVTSSDERRQSMMR-SIGAEAAPWGDLFAIWN------VDTPGQD---------------PKTALLEIEGFPEGTAFHPHGIHYRPETEELFVVNHAYSQGGERIDVFKVT 529 EDI+ + +F+T +D+R + G P G L A++ + G++ + A + + FP+G AFHPHG++Y T +LFV+NHAY +GGERIDVF +T Sbjct: 8 EDIVTLTPSLFITGTDDRLRLWENPDFGPTRTPQGGLVALFEEKEGEGLRKGGREGEMRXXXXXXXXXXXXRVASIPLLDFPKGVAFHPHGMYYHRSTSKLFVINHAYDKGGERIDVFYLT 128
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: A0A6B2L681_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L681_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 4.420e-8 Identity = 54/161 (33.54%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 113 AFIGLAIAKLLSVYWEMEKRLPKSSFGSEGCTRY--RNMMSPEDIIPVFEGVFVTSSDERRQSMMRSIGAEAA-PWGDLFAIWNVDTPGQDPKTALLEIEGFPEGT-AFHPHGI--HYRPETEELFVVNHAYSQGGERIDVFKVTPNFPQEALPSIHPSLL 577 A +G + + W + +P + ++GC R ++ ED ++GV +T +D+R + +G A P G LF VD G + L + GFP T AFHPHG+ H L+VVNHAY++GGERI+VF V+ ++ + H SLL Sbjct: 14 ALLGFLVPLVHKYRWALTP-VPLTYAPTDGCVRLTAEGLVGAEDFAE-YKGVLITGTDDRIS--LWELGTPAGTPSGGLFV---VDPVGDGVRR--LNLGGFPWDTLAFHPHGLFLHEHQGAHFLYVVNHAYAKGGERIEVFAVSGEGFEDLEVTHHQSLL 165
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: A0A6B2L869_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L869_9EUKA) HSP 1 Score: 64.7 bits (156), Expect = 1.680e-7 Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 368 GQDPKTALLE---IEGFPEGTAFHPHGIHYRPETEELFVVNHAYSQGGERIDVFKVT 529 G DPKT ++ + FP+G FHPHG+ P L+V+NHA+ +GGER++VFKVT Sbjct: 24 GIDPKTDAIKPLPLTNFPKGVPFHPHGLSIDPSRSFLYVINHAFDKGGERVEVFKVT 80
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: A0A7S4ER95_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ER95_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.730e-7 Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 2 Query: 380 KTALLEIEGFPEGTAFHPHGIHYRPETEELFVVNHAYSQGGERIDVFKV 526 K L I +PEG FHPHGI+ R E L+V+NHAY +GGERIDVF + Sbjct: 112 KIQELPIINYPEGVNFHPHGIYIRKEDRTLYVINHAYEKGGERIDVFGI 160
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: A0A3M1AS30_9BACT (Uncharacterized protein n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M1AS30_9BACT) HSP 1 Score: 62.4 bits (150), Expect = 1.000e-6 Identity = 72/264 (27.27%), Postives = 115/264 (43.56%), Query Frame = 2 Query: 1094 KLTYSFTVEHDAITTNYGVLNDLVLVDDDELYVTQYVAWRLPLHGPTQPDSILEYLRLCGSTLGWLLQMSPAPIIRCTGIRGPDMDCQNLARGRGVMYNGIALSPNGERLLVADTLAMQMMVFNRSLETGELALRQRLDLPGAPDNLEIDPYRAAEGVEAYTVGLVRASDFMKYAVTMDGAAHPSDGDDIKMAGGVASVVYNKDSGKRQLKASIARR---ISRYESSLEMWQDGSLLSISSAASTASGARLVGSAVEEGFLLCR 1876 +L + +V+ D +T+ ND++ V +++ YVT HG T G TL LQ++ + ++ G+ + +A+G NGI LSP+G+ + VA T++ + V++R L++G L LRQR+D+ DN+E+D + G + R F+KYA KDS R + R YE DG+ LS SS A+ L+GS + FL+CR Sbjct: 133 QLLHRRSVQGDLMTSP----NDVIPVGEEQFYVTND-------HGSTHG---------LGKTLEEYLQLARSYVLYFDGL-----SFRKVAKGLAYA-NGINLSPDGKTVYVAATVSQAIFVYDRDLQSGNLNLRQRIDVHTGADNVEVD----STG-NLWIGAHPRLLTFVKYA---------------------------KDSTHRSPSQVLRVRWLSYGNYEIDDIYMNDGNPLSGSSVAAVFRNQLLIGSVFDRKFLVCR 338
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Match: A0A1E7EW50_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW50_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 1.590e-6 Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 2 Query: 380 KTALLEIEGFPEGTAFHPHGIHYRPETEELFVVNHAYSQGGERIDVFKV 526 K L I +PE FHPHGI+ R E L+VVNHAY +GGERIDVF + Sbjct: 132 KVEKLPIINYPEKINFHPHGIYIRKEDRTLYVVNHAYEKGGERIDVFTI 180 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1614.4217.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1614.4217.1 >prot_L-elsbetiae_contig1614.4217.1 ID=prot_L-elsbetiae_contig1614.4217.1|Name=mRNA_L-elsbetiae_contig1614.4217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=656bp MAILAEPVRRITGARVANRGANYPLLGLAFIGLAIAKLLSVYWEMEKRLPback to top mRNA from alignment at L-elsbetiae_contig1614:14526..23668- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1614.4217.1 ID=mRNA_L-elsbetiae_contig1614.4217.1|Name=mRNA_L-elsbetiae_contig1614.4217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=9143bp|location=Sequence derived from alignment at L-elsbetiae_contig1614:14526..23668- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1614:14526..23668- >mRNA_L-elsbetiae_contig1614.4217.1 ID=mRNA_L-elsbetiae_contig1614.4217.1|Name=mRNA_L-elsbetiae_contig1614.4217.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3936bp|location=Sequence derived from alignment at L-elsbetiae_contig1614:14526..23668- (Laminarionema elsbetiae ELsaHSoW15)back to top |