mRNA_L-elsbetiae_contig16134.4213.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: D7FI72_ECTSI (4-hydroxyphenylpyruvate dioxygenase, plastid n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI72_ECTSI) HSP 1 Score: 234 bits (596), Expect = 1.290e-72 Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 1 Query: 1 QGEYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRIPSLTEDQLEQLE 378 QGEY+T MTGMHEFAEFAAADVGT DSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLM+ANSG GGFEFM PPG +YY DVPRRIPSLTEDQL QLE Sbjct: 281 QGEYMTSMTGMHEFAEFAAADVGTVDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMRANSGLGGFEFMEPPGASYYRDVPRRIPSLTEDQLRQLE 406
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: A0A835YZ91_9STRA (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ91_9STRA) HSP 1 Score: 182 bits (462), Expect = 2.020e-53 Identity = 88/124 (70.97%), Postives = 102/124 (82.26%), Query Frame = 1 Query: 7 EYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRIPSLTEDQLEQLE 378 E + GMTGMH FAEF A DVGT DSGLNS+VLASNNE+VLLPLNEPT+GT +KSQIQT+LEQN GPGLQH+ALKTNDI T+RLMK S GGFEF+ PG AYYSD+P R+P LT Q+ +L+ Sbjct: 234 ERLGGMTGMHRFAEFTAEDVGTVDSGLNSVVLASNNEVVLLPLNEPTYGTKRKSQIQTYLEQNVGPGLQHLALKTNDIIGTLRLMKERSHMGGFEFLDAPGEAYYSDLPARVPELTPQQVSELQ 357
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: L8HJ93_ACACA (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJ93_ACACA) HSP 1 Score: 176 bits (446), Expect = 3.260e-51 Identity = 86/127 (67.72%), Postives = 104/127 (81.89%), Query Frame = 1 Query: 1 QGEYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRI-PSLTEDQLEQLE 378 Q +Y+ +TG HEFAEF A DVGT DSGLNS+V+ASNNEMVLLP NEPTFGT +KSQIQT+LEQNDG GLQH+ALKT+DIF TMR +KA + GGF+FMPP PAYY ++P +I +LT DQ ++LE Sbjct: 217 QIDYVAKITGWHEFAEFTAEDVGTVDSGLNSMVMASNNEMVLLPFNEPTFGTKRKSQIQTYLEQNDGEGLQHLALKTDDIFATMRKLKAATNLGGFDFMPPASPAYYKNLPEKIGDALTPDQYKELE 343
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: D0NEM3_PHYIT (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NEM3_PHYIT) HSP 1 Score: 170 bits (431), Expect = 7.640e-50 Identity = 85/125 (68.00%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 7 EYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRI-PSLTEDQLEQLE 378 +YITG TG HEFAEF A DVGT DSGLNS+VLASNNEMVLLP+NEPTFGT +KSQIQT+LEQN G GLQH+ALKT+DIF T+ M+ S GGFEFMP P YY +P+RI +LT++Q +Q+E Sbjct: 197 KYITGFTGFHEFAEFTAEDVGTLDSGLNSMVLASNNEMVLLPVNEPTFGTKRKSQIQTYLEQNVGAGLQHMALKTDDIFHTLAEMQKRSHVGGFEFMPRPNKVYYEQMPKRIGDALTQEQYKQIE 321
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: A0A8J4C450_9CHLO (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C450_9CHLO) HSP 1 Score: 172 bits (437), Expect = 9.950e-50 Identity = 85/125 (68.00%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 7 EYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRI-PSLTEDQLEQLE 378 EYI G TG HEFAEF A DVGT DSGLNS+VLA NNE VLLP+NEPTFGT +KSQIQT+LEQN+GPGLQH+AL TNDIF T+R M+A S GGFEFMP P YY D+P++I +LT +Q +++E Sbjct: 229 EYIMGFTGFHEFAEFVAEDVGTVDSGLNSMVLACNNEAVLLPVNEPTFGTPRKSQIQTYLEQNEGPGLQHLALLTNDIFSTLREMRARSEVGGFEFMPSPSDRYYRDLPKKIGDTLTPEQYKEVE 353
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: K3WDR9_GLOUD (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDR9_GLOUD) HSP 1 Score: 172 bits (435), Expect = 1.470e-49 Identity = 86/125 (68.80%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 7 EYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRI-PSLTEDQLEQLE 378 EY+ G TG HEF+EF A DVGT DSGLNS+VL+SNNEMVL+P+NEPTFGT +KSQIQT+LEQN GPGLQH+ALKTNDIFRT+ M+ S GGFEFMP P YY +P RI SLTE Q +Q+E Sbjct: 222 EYVMGFTGFHEFSEFTAEDVGTVDSGLNSMVLSSNNEMVLIPVNEPTFGTKRKSQIQTYLEQNVGPGLQHMALKTNDIFRTLGEMRKRSYLGGFEFMPRPEKGYYERLPARIGDSLTEKQYKQIE 346
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: G4YVC5_PHYSP (4-hydroxyphenylpyruvate dioxygenase n=5 Tax=Phytophthora TaxID=4783 RepID=G4YVC5_PHYSP) HSP 1 Score: 171 bits (434), Expect = 1.980e-49 Identity = 86/125 (68.80%), Postives = 100/125 (80.00%), Query Frame = 1 Query: 7 EYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRI-PSLTEDQLEQLE 378 +YITG TG HEF+EF A DVGT +SGLNS+VLASNNEMVLLP+NEPTFGT +KSQIQT+LEQN G GLQH+ALKTNDIF T+ M+ S GGFEFMP P YY +P RI SLT++Q EQ+E Sbjct: 220 KYITGFTGFHEFSEFTAEDVGTLESGLNSMVLASNNEMVLLPVNEPTFGTKRKSQIQTYLEQNVGAGLQHVALKTNDIFHTLAEMRKRSLVGGFEFMPSPNKRYYEQMPERIGDSLTKEQYEQIE 344
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: D8U1V8_VOLCA (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8U1V8_VOLCA) HSP 1 Score: 171 bits (434), Expect = 2.600e-49 Identity = 84/125 (67.20%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 7 EYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRI-PSLTEDQLEQLE 378 EY+ G TG HEFAEF A DVGT DSGLNS+VLASNNE VLLP+NEPTFGT +KSQIQT+LEQN+GPGLQH+AL TNDIF T+R M+A S GGFEFMP P YY ++P++I +LT Q +++E Sbjct: 226 EYVMGFTGFHEFAEFVAEDVGTVDSGLNSMVLASNNEAVLLPINEPTFGTPRKSQIQTYLEQNEGPGLQHLALLTNDIFATLREMRARSDMGGFEFMPRPSDKYYRELPKKIGDTLTPMQYKEVE 350
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: A0A6G0XAY8_9STRA (4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAY8_9STRA) HSP 1 Score: 172 bits (435), Expect = 3.460e-49 Identity = 82/125 (65.60%), Postives = 101/125 (80.80%), Query Frame = 1 Query: 7 EYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRI-PSLTEDQLEQLE 378 EY+ G TG HEFAEF A DVGT DSGLNS+VLA+N E++LLP+NEPT GT +KSQIQTFLEQN+GPGLQH+ALKTNDIF TM M+ S FGGFEFMP P +YY ++P++I + T +Q +Q+E Sbjct: 264 EYVCGFTGWHEFAEFTAEDVGTVDSGLNSMVLANNTELILLPMNEPTIGTKRKSQIQTFLEQNEGPGLQHMALKTNDIFHTMSEMRKRSHFGGFEFMPKPSESYYKNLPKKIGDAFTAEQYKQIE 388
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Match: A0A150GDL0_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GDL0_GONPE) HSP 1 Score: 171 bits (432), Expect = 9.950e-49 Identity = 82/125 (65.60%), Postives = 103/125 (82.40%), Query Frame = 1 Query: 7 EYITGMTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQIQTFLEQNDGPGLQHIALKTNDIFRTMRLMKANSGFGGFEFMPPPGPAYYSDVPRRI-PSLTEDQLEQLE 378 EYI G TG HEFAEF A DVGT DSGLNS+VLA+NN+MVL+P+NEPTFGT +KSQIQT+LEQN+GPGLQH+AL T+DIF T+R M+A S GGFEFMP P YY ++P++I +LT +Q +++E Sbjct: 226 EYIMGFTGFHEFAEFVAEDVGTVDSGLNSMVLANNNQMVLMPVNEPTFGTPRKSQIQTYLEQNEGPGLQHLALLTHDIFHTLREMRARSELGGFEFMPRPSDKYYRELPKKIGDTLTPEQYKEVE 350 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16134.4213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig16134.4213.1 >prot_L-elsbetiae_contig16134.4213.1 ID=prot_L-elsbetiae_contig16134.4213.1|Name=mRNA_L-elsbetiae_contig16134.4213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp MTGMHEFAEFAAADVGTGDSGLNSIVLASNNEMVLLPLNEPTFGTAKKSQback to top mRNA from alignment at L-elsbetiae_contig16134:560..3777- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig16134.4213.1 ID=mRNA_L-elsbetiae_contig16134.4213.1|Name=mRNA_L-elsbetiae_contig16134.4213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3218bp|location=Sequence derived from alignment at L-elsbetiae_contig16134:560..3777- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig16134:560..3777- >mRNA_L-elsbetiae_contig16134.4213.1 ID=mRNA_L-elsbetiae_contig16134.4213.1|Name=mRNA_L-elsbetiae_contig16134.4213.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig16134:560..3777- (Laminarionema elsbetiae ELsaHSoW15)back to top |