prot_L-elsbetiae_contig1610.4195.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1610.4195.1
Unique Nameprot_L-elsbetiae_contig1610.4195.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length102
Homology
BLAST of mRNA_L-elsbetiae_contig1610.4195.1 vs. uniprot
Match: A0A6H5JLT2_9PHAE (GPS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLT2_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.460e-19
Identity = 53/105 (50.48%), Postives = 74/105 (70.48%), Query Frame = 0
Query:    1 MVHMMVKASFIGNSTDYRVQFAQILVSLAVSMPGSIVIPKLFAAAAAPPASVAAK--GSWKAIVPSGERPS--AKSVSDAKAHKYMRWLHDSNSFVAVVRLVSAA 101
            +VHM+V+AS + NST Y+++   I+VSLAVSMP SI+ PKLFAAAAAPP S+      +W+ IVP   + S  A+ ++ AKA+   RWL + N+ VAV RL+S+A
Sbjct:  480 LVHMLVEASIVANSTSYKIRAVHIVVSLAVSMPASILFPKLFAAAAAPPPSITVTMLHAWEKIVPPTSQGSTTAQDMTYAKANSQSRWLREPNTVVAVFRLISSA 584          
BLAST of mRNA_L-elsbetiae_contig1610.4195.1 vs. uniprot
Match: D7G4X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X3_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.710e-10
Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = 0
Query:   27 SLAVSMPGSIVIPKLFAAAAAPPASVAAK--GSWKAIVPSGERP--SAKSVSDAKAHKYMRWLHDSNSFVAVVRLVSAA 101
            SLAVSMP SI+IPKLFA AAAPP SV      +W+ IVPS  +   +A+ ++++KA+   RWL + N+ +AV RL+S+A
Sbjct: 1440 SLAVSMPASILIPKLFATAAAPPPSVTVTMLHAWEKIVPSTNQEVLTAQDMTNSKANSQTRWLREPNTVMAVFRLISSA 1518          
BLAST of mRNA_L-elsbetiae_contig1610.4195.1 vs. uniprot
Match: D7G3A0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3A0_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 3.170e-5
Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 0
Query:   18 RVQFAQILVSLAVSMPGSIVIPKLFAAAAAPPASVAAKGSWKAIV 62
            +V++AQIL SLA ++P SIV+P+ FAA+A PP SV AK +W  +V
Sbjct:  921 KVEYAQILASLAATLPASIVVPRAFAASATPPPSVTAKRNWLQVV 965          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1610.4195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JLT2_9PHAE1.460e-1950.48GPS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4X3_ECTSI1.710e-1050.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3A0_ECTSI3.170e-555.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..102
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..43
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..31
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1610contigL-elsbetiae_contig1610:22703..24706 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1610.4195.1mRNA_L-elsbetiae_contig1610.4195.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1610 22703..24736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1610.4195.1 ID=prot_L-elsbetiae_contig1610.4195.1|Name=mRNA_L-elsbetiae_contig1610.4195.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=102bp
MVHMMVKASFIGNSTDYRVQFAQILVSLAVSMPGSIVIPKLFAAAAAPPA
SVAAKGSWKAIVPSGERPSAKSVSDAKAHKYMRWLHDSNSFVAVVRLVSA
AA
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