prot_L-elsbetiae_contig16086.4186.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16086.4186.1
Unique Nameprot_L-elsbetiae_contig16086.4186.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
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BLAST of mRNA_L-elsbetiae_contig16086.4186.1 vs. uniprot
Match: D8LEH3_ECTSI (VHS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH3_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 6.130e-40
Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 0 
Query:    1 MVPPTIEALMDIMEGSKDLTELLDNDVVQDVTDQTRGLVEQVIKKVEELNAAGNPDEKDMDRYLKAHDDLQTVLRVYDAVLDGNEPLPLSR 91
            MVPPTIEALMDIMEGSKDLTELL N+V  DV DQTR LV+QVIKKVE+L  +GNPDEKD+DRYLKAHDDLQTVLRVY+ V+DG+E LPLSR
Sbjct:  264 MVPPTIEALMDIMEGSKDLTELLGNEVAPDVVDQTRDLVQQVIKKVEDLGHSGNPDEKDLDRYLKAHDDLQTVLRVYEGVVDGSETLPLSR 354
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BLAST of mRNA_L-elsbetiae_contig16086.4186.1 vs. uniprot
Match: A0A6H5JQS7_9PHAE (VHS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS7_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 6.690e-39
Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 0 
Query:    1 MVPPTIEALMDIMEGSKDLTELLDNDVVQDVTDQTRGLVEQVIKKVEELNAAGNPDEKDMDRYLKAHDDLQTVLRVYDAVLDGNEPLPLSR 91
            MVPPTIEALMDIMEGSKDLTELL N+V  DV DQTR LV+QVIKKVE+L  +GNPDEKD+DRYLKAHDDLQTVLRVY+ V+DG+E LPLSR
Sbjct:  269 MVPPTIEALMDIMEGSKDLTELLGNEVAPDVVDQTRDLVQQVIKKVEDLGQSGNPDEKDLDRYLKAHDDLQTVLRVYEGVVDGSETLPLSR 359
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16086.4186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEH3_ECTSI6.130e-4081.32VHS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQS7_9PHAE6.690e-3981.32VHS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004152GAT domainPFAMPF03127GATcoord: 9..83
e-value: 8.9E-8
score: 32.3
NoneNo IPR availableSUPERFAMILY89009GAT-like domaincoord: 4..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16086contigL-elsbetiae_contig16086:600..2416 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16086.4186.1mRNA_L-elsbetiae_contig16086.4186.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16086 589..2416 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16086.4186.1 ID=prot_L-elsbetiae_contig16086.4186.1|Name=mRNA_L-elsbetiae_contig16086.4186.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
MVPPTIEALMDIMEGSKDLTELLDNDVVQDVTDQTRGLVEQVIKKVEELN
AAGNPDEKDMDRYLKAHDDLQTVLRVYDAVLDGNEPLPLSRG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004152GAT_dom