mRNA_L-elsbetiae_contig1606.4178.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1606.4178.1
Unique NamemRNA_L-elsbetiae_contig1606.4178.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: A0A6H5K0Y1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y1_9PHAE)

HSP 1 Score: 579 bits (1493), Expect = 1.100e-201
Identity = 328/509 (64.44%), Postives = 353/509 (69.35%), Query Frame = 1
Query:    1 GPFLYEQRETAPPWGVGWLTNSTATVGQHADDLFSGPRGETADDQAPTDQQKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRGPQAGNSTETTTRRDAGASGDSLFHSLSRPPSFMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGD-PSSAAMPGMPHFLCGGNPPQGTYVYYPYVPSLPGQQDAAASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLKVVRKRGQQTGSPSNSTNSPT------------SVRASDLGYTSG-------------------------GAGGGNGDNN-----IGAGLQADLDFLTPEGPLGQSLAR 1398
            GPF +E RETAP W VGWL  S     QH DD FS PR     D A TDQQKKKLFVGMAPKSAYEEDYRAVF PFG  IDIYVIRDRNGFSKGCAFVRYESV+SASDAIEALHDK++MPGGFRTLVVT+ADDRRGPQ      TTTRRDA  SGD L  SLSRP SFMGSD             S  +L G  R +   PQ G  A+AP   PG  PSS  + GMP+FLCGGNPPQGTYVYYPYVPS   Q D   S A P+ +G KPHHA SVGSPA  N++R  LGARGAQEDGY GD TVR+FGTGGPEE+GRRWAKQ VGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSY+ P+EA+AAI+SMNGFFIGQKRLKVVRKRGQQT    +S+                S R  D GY +                          G   GNGD        G+G QADLDF TPEG LG S+ R
Sbjct:   10 GPFSFEHRETAPTWSVGWLPTSPTMAEQHNDDAFSRPREMLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVRSASDAIEALHDKYIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDVLLRSLSRPSSFMGSDSSVGGSIP-----SFGNLVGQNRSTVAAPQAGATAVAPTIAPGSRPSSGLLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTGLSVA-PVGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKRLKVVRKRGQQTDRCLDSSXXXXXXXXXXXXXXXXSGRPRDPGYAASDGSCGLARPDRGASGIAGSNVVVGSGVNNGNGDGTSHRSIFGSGSQADLDF-TPEGLLGPSMTR 511          
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: D7FV61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV61_ECTSI)

HSP 1 Score: 568 bits (1463), Expect = 1.160e-199
Identity = 297/400 (74.25%), Postives = 314/400 (78.50%), Query Frame = 1
Query:    1 GPFLYEQRETAPPWGVGWLTNSTATVGQHADDLFSGPRGETADDQAPTDQQKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRGPQAGNSTETTTRRDAGASGDSLFHSLSRPPSFMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGD-PSSAAMPGMPHFLCGGNPPQGTYVYYPYVPSLPGQQDAAASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRL 1197
            GPF YE RETAPPW VGWL  S     QH DD FS PR     D A TDQQKKKLFVGMAPKSAYEEDYRAVF PFG  IDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKH+MPGGFRTLVVT+ADDRRGPQ      TTTRRDA  SGD LF +LSRP SFMGSD G           SL ++ G  R + T PQ G  A AP   PG  PSS  + GMP+FLCGGNPPQGTYVYYPYVPS   Q D   SSA P  +G KPHHA SVGSPA  N++R  LGARGAQEDGY GD TVR+FGTGGPEE+GRRWAKQ VGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSY+ P+EA+AAI+SMNGFFIGQK L
Sbjct:    7 GPFSYEHRETAPPWSVGWLPTSPTMAEQHTDDAFSRPRELLLGDHAHTDQQKKKLFVGMAPKSAYEEDYRAVFEPFGTPIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHIMPGGFRTLVVTVADDRRGPQTSAVGTTTTRRDAVGSGDGLFRALSRPSSFMGSDSGGGGTIP-----SLGNVVGQNRSTVTAPQAGATAFAPTVAPGSGPSSGLLSGMPYFLCGGNPPQGTYVYYPYVPSSSVQHDTG-SSAAPAGIGAKPHHAFSVGSPAVGNNDRCELGARGAQEDGYTGDRTVRKFGTGGPEERGRRWAKQSVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYSKPDEAEAAISSMNGFFIGQKFL 400          
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: D7FV60_ECTSI (Trinucleotide repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 7.110e-60
Identity = 159/373 (42.63%), Postives = 191/373 (51.21%), Query Frame = 1
Query:  148 QQKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRGPQAGNSTETTTRRDAGASGDSLFHSLSRPPSFMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGDPSSA-AMPGMPHFLCGGN------PPQGTYVYYPY-VPSLPGQQDAAASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPV-GPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLKVVRKR-GQQTGSP 1236
            +Q+ KLFVGMAPKSA E++ RAVFAP+G L +I+VIR+++G +KGCAFV+Y + +SA DAIEALH+++ M GG R LVV  AD++RG QA         R  G  G    H     P   G  G                      P A     G  A  P   PG P S   M GMP+ +  G       P QG+YVYYPY  P  P Q             G   +H+   G P+                                          +P  GP GANLF+Y+LP  L+DADLATAFAPFG VLSAKVY DR +GESKGFGFVSY+ P  A+AAIA MNGF IG KRLKV  KR GQ T  P
Sbjct:  128 EQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAG------RLGGLIGSPGRHGSGPHPEAGGWMG---------------------HPGAG----GQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGGQAPGAPAQGSYVYYPYGAPGYPPQPG-----------GPGQYHS---GPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFGFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDP 455          
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: D8LNL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL8_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 8.470e-45
Identity = 151/438 (34.47%), Postives = 192/438 (43.84%), Query Frame = 1
Query:    7 FLYEQRETAPPWGVGWLTNSTATVGQHADDLFS--------------------------GPRGETADDQAPTDQQKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRGPQAGNSTETTTRRDAGASG-DSLFHSLSRPPSFMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGDPSSAAMPGMPHFLCGGNPPQGTYV--YYPYVPSLPGQQDA------AASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLKVVRKR 1215
             +   R+T    G  +LT  T   G+ A D F                           GP G  A    P D++ K LFVGM P  A +     VF+ FG + +IY +R+ +G  KGCAFV++ +  +A  AIEALH+K  M G  R LVV  AD ++   A         R A   G +  +H          S GG            + S    + P                       A   G P+ +    PP G Y   Y P  P  PGQ  A      A S+  P     +   ++S  S AGD S+  S    G    G                E G   A+   GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKV+ D+ T ESKGFGFVSY +P EA+ AI+ MNGF IG KRLKV  K+
Sbjct:    1 MVIRDRQTDAHRGCAFLTYQTREAGERAVDKFHNKVKLPNAHNPVQVRPADSQMGDDRLGPNGRVA----PVDRENK-LFVGMLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFSTRSAAIAAIEALHEKCTMDGATRALVVKFADVKKAQTAKGWMVPPDARGASPLGYNGRYHGGGT------SVGGYWQATGAPGGRDVYSKGREVYPDY---------------------ANHRGYPYQV---GPPGGGYSQSYGPEYPHHPGQPQARHGGYVAYSNLNPSHYPAQVDRSLSPSSGAGDRSHNFSSPPGGPVPGGIGXXXXXXXXXXXXRGEHGGG-ARPQEGPPGANLFIYHLPNDLTDADLATAFAPFGHVVSAKVFLDKRTQESKGFGFVSYNHPAEAEVAISKMNGFQIGSKRLKVQHKK 402          
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: A0A7S4QD22_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QD22_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.930e-44
Identity = 145/395 (36.71%), Postives = 184/395 (46.58%), Query Frame = 1
Query:   94 DLFSGPRGETADDQAPTDQ---QKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRDRNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRGPQAGNSTETTTRRDAGASGDSLFHSLSRPPS-FMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGDPSSAAMPGMPHFLCGGNPPQ---GTYVYYPYVPSLPGQQDAAASSACPLVLGTKPHHAISVG----------SPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLKVVRKRGQQT 1227
            D ++ PRG+      P  +    + KLFVGM P+   E+D R +F+PFG +  IY+IR+ +G  KGCAFV++   +SA  AI  LH ++ M G  R+LVV  AD  +G +  +      RR+A  +  ++ H    P S F    G                +A P  P A     G    +P  G   P S    G   +  G  PPQ   G Y +  + P  P  Q                  A   G           P G + N+     RG   DG     T  R     P E          GP GANLF+Y+LP  LTDADLATAF PFG V+SAKVY DR TGESKGFGFVSY +   A+ AI  MNGF IG KRLKV  KR  +T
Sbjct:  256 DKYTFPRGKKPVQVRPASEGSDTEVKLFVGMLPRKTTEKDLREIFSPFGDISAIYLIRNDDGTQKGCAFVKFHQRESAQAAINTLHGQYCMEGMRRSLVVKYAD--KGYRRASRRYQAARREAYEN--AVMHGHPNPGSVFYVPSGPGGPPPQMPGFPPGGPMAYPQPPQAGPHAEGTQGPSPPMGISPPVS----GTGQYSVG-QPPQYATGAYPHGSHTP--PSSQXXXXXXXXXXXXXXXXXAAAPYGMPQGFSGGQAGPGGAHQNKPRFYGRGQNRDGQLPHATTPR-----PRE----------GPAGANLFIYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGESKGFGFVSYDSVISAEHAIEQMNGFQIGTKRLKVQHKRVTKT 624          
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: D0NNK0_PHYIT (CUG-BP-and ETR-3-like factor, putative n=17 Tax=Phytophthora TaxID=4783 RepID=D0NNK0_PHYIT)

HSP 1 Score: 171 bits (432), Expect = 5.390e-44
Identity = 138/363 (38.02%), Postives = 176/363 (48.48%), Query Frame = 1
Query:  151 QKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRG--PQAGNSTETTTRRDAGASGDSL-FHSLSR-PPSFMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGDPSSAAMPGMPHFLCGGNPPQGTYVYYPYVPSLPGQQDAAASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLKVVRKRGQQ 1224
            Q+ KLF+GM PK+A E   R VF  FG++ ++Y++R    G SKGCAF++++   SA  AIE ++    M  G   LVV  AD RR    +A N    T        G  L F  L +    +M                +++ L  P+  +A+             GPG P+++ M                  Y PY          AA +A P   G  P+ A      A     +  LGA            ++   G G    K  R   Q  GPTGANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY + + ADAAIASMNGF IG KRLKV  KR  Q
Sbjct:  119 QEHKLFIGMIPKTADEAAIRDVFELFGSIEEVYILRHPATGQSKGCAFLKFKERSSALAAIEEVNGIVTMDRGTSPLVVKFADSRRQRLQRARNLAAATNAYWPLPPGAGLAFPQLQQLQQQYMQQMQAFGAQAAAGMSPTVAGLGSPVGATAS-------------GPGSPTNSFM-----------------YYNPY--------GFAAGAAAPYGFGGMPNVA------AAGFDMQTGLGA------------SLDLQGQGAEAAKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGTKRLKVQHKRIHQ 425          
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: A0A1W0A7F0_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7F0_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.330e-43
Identity = 135/361 (37.40%), Postives = 168/361 (46.54%), Query Frame = 1
Query:  151 QKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRGPQAGNSTETTTRRDAGASGDSLFHSLSRPPS----FMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGDPSSAAMPGMPHFLCGGNPPQGTYVYY-PYVPSLPGQQDAAASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLKVVRKR 1215
            Q+ KLF+GM PK A E   R VFAP GA+ +IY++R    G SKGCAF++Y+   SAS AIEA +  + M  G   LVV  AD RR             R+  A+  + +  L  PP     F                    +L G   P                  G P  A  P              T++YY PY  +      A+  ++ P   G  P     + +P         +G  GA                        R A Q  GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKV+ D++TGESKGFGFVSY + + ADAAIASMNGF IG KRLKV  KR
Sbjct:  123 QEHKLFIGMIPKHADEASIREVFAPHGAIEEIYILRHPATGQSKGCAFLKYKDRHSASSAIEAFNGIYTMDRGTAPLVVKFADSRR-------QRIQRARNQAATAAAAYWQL--PPGGTIPFPQIQQIQQQYMQQMQVFGAQALGGQTSPG-----------------GSPIPATNPA-------------TFMYYNPYAFAA-----ASGYNSFPPAGGPAPFPLDPLATPM------PGMGLSGA------------------------RAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKR 409          
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: A0A1V9ZMV5_9STRA (CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZMV5_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.700e-43
Identity = 135/363 (37.19%), Postives = 167/363 (46.01%), Query Frame = 1
Query:  151 QKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRGPQAGNSTETTTRRDAGASGDSLFHSLSRPPS----FMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGDPSSAAMPGMPHFLCGGNPPQGTYVYYPYVPSLPGQQDAAASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLKVVRKRGQQ 1224
            Q+ KLF+GM PK A E   R VFAP GA+ +IY++R    G SKGCAF++++   SAS AIEA +  + M  G   LVV  AD RR             R+  A+  + +  L  PP     F                    +LAG + P ++                 PS AA P               ++YY           AAAS       G  P   +   + A   +   S                            G R A Q  GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKV+ D++TGESKGFGFVSY +   ADAAIASMNGF IG KRLKV  KR  Q
Sbjct:  179 QEHKLFIGMIPKHADESSIREVFAPHGAIEEIYILRHPATGQSKGCAFLKFKDRHSASTAIEAFNGTYTMDRGTAPLVVKFADSRR-------QRIQRARNQAATAAAAYWQL--PPGGTIPFPQLQQIQQQYMQQMQAFGAQALAGQMSPGSS-----------------PSPAANPA-------------AFMYYNQYAF------AAASGYTGFPSGVAPPFPLDALATAVPGAAAAS----------------------------GARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVAAADAAIASMNGFQIGSKRLKVQHKRVHQ 468          
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: A0A662WJB0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WJB0_9STRA)

HSP 1 Score: 168 bits (426), Expect = 6.990e-43
Identity = 136/369 (36.86%), Postives = 175/369 (47.43%), Query Frame = 1
Query:  151 QKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRG--------PQAGNSTETTTRRDAGASGDSLFHSLSRPPSFMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGDPSSAAMPGMPHFLCGGNPPQGTYVYYPYVPSLPGQQDAAASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLKVVRKRGQQTG 1230
            Q+ KLF+GM PK+A E   R VF  FG + ++Y++R    G SKGCAF++++   SA  AI+ ++    M  G   LVV  AD RR           A  +T       AG     L     +    M + G             LSS   P+  +AT             GPG P+++ M   P+   G  P       +  +PS+ G  D  AS                +G+  G ++  + + A                        K  R   Q  GPTGANLF+Y+LP  LTDADLATAFAPFG V+SAKVY D+ TGESKGFGFVSY + + ADAAIASMNGF IG KRLKV  KR  Q G
Sbjct:  149 QEHKLFIGMIPKTADEAAIREVFELFGTIEEVYILRHPATGQSKGCAFLKFKDRNSALAAIDEVNGAVTMDRGTSPLVVKFADSRRQRLQRARNLAAAAANTYWPMPPGAGLPFPQLQQLQQQYMQQMQAFGAQTAAGMNPVAAGLSS---PVGAAAT-------------GPGSPTNSFMYYNPYGFAGAAP-----YGFNGLPSVGGGFDMQASL---------------MGAAGGVDAQSQGVEAA----------------------AKASRTTSQLEGPTGANLFIYHLPHDLTDADLATAFAPFGTVISAKVYMDKITGESKGFGFVSYDSADAADAAIASMNGFQIGSKRLKVQHKRIHQRG 459          
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Match: T0QG38_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QG38_SAPDV)

HSP 1 Score: 165 bits (418), Expect = 1.970e-42
Identity = 134/361 (37.12%), Postives = 167/361 (46.26%), Query Frame = 1
Query:  151 QKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRD-RNGFSKGCAFVRYESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRGPQAGNSTETTTRRDAGASGDSLFHSLSRPPS----FMGSDGGXXXXXXXXXXXSLSSLAGPIRPSATVPQPGLAALAPNAGPGDPSSAAMPGMPHFLCGGNPPQGTYVYY-PYVPSLPGQQDAAASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGDGTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAPFGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLKVVRKR 1215
            Q+ KLF+GM PK A E   R VFA  G + +IY++R    G SKGCAF++Y+   +AS AI+A +  + M  G   LVV  AD RR             R+  A+  + +  L  PP     F                    +LAG   P A+                 PS AA P               ++YY PY         AAA+       G  P   +   + A  +S      A                         G R A Q  GP GANLF+Y+LP  LTDADLATAFAPFG V+SAKV+ D++TGESKGFGFVSY + + ADAAIASMNGF IG KRLKV  KR
Sbjct:  126 QEHKLFIGMIPKHADESSIREVFASHGPIEEIYILRHPATGQSKGCAFLKYKDRHAASAAIDAYNGTYTMERGTAPLVVKFADSRR-------QRIQRARNQAATAAAAYWQL--PPGGTIPFPQLQQIQQQYMQQMQAFGAQALAGQSSPGAS-----------------PSPAANPA-------------AFMYYNPYA-------FAAATGYPSFPTGAAPPFPLDALASAVPSSVAAVAAA-----------------------SSGARAATQLEGPAGANLFIYHLPHDLTDADLATAFAPFGTVISAKVFMDKNTGESKGFGFVSYDSVQAADAAIASMNGFQIGSKRLKVQHKR 417          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1606.4178.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K0Y1_9PHAE1.100e-20164.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FV61_ECTSI1.160e-19974.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FV60_ECTSI7.110e-6042.63Trinucleotide repeat containing 4, isoform CRA_d n... [more]
D8LNL8_ECTSI8.470e-4534.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4QD22_9STRA3.930e-4436.71Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
D0NNK0_PHYIT5.390e-4438.02CUG-BP-and ETR-3-like factor, putative n=17 Tax=Ph... [more]
A0A1W0A7F0_9STRA2.330e-4337.40CUG-BP-and ETR-3-like factor n=1 Tax=Thraustotheca... [more]
A0A1V9ZMV5_9STRA3.700e-4337.19CUG-BP-and ETR-3-like factor n=1 Tax=Achlya hypogy... [more]
A0A662WJB0_9STRA6.990e-4336.86Uncharacterized protein (Fragment) n=2 Tax=Nothoph... [more]
T0QG38_SAPDV1.970e-4237.12Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1606contigL-elsbetiae_contig1606:17477..19372 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score573.2
Seed ortholog evalue1.1e-160
Seed eggNOG ortholog2880.D7FV61
KEGG koko:K13207
Hectar predicted targeting categoryother localisation
EggNOG free text desc.positive regulation of mRNA splicing, via spliceosome
EggNOG OGsKOG0144@1,KOG0146@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-12_007410.1
Exons3
Model size1398
Cds size1398
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1606.4178.1prot_L-elsbetiae_contig1606.4178.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1606 17477..19372 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815663.6383884-CDS-L-elsbetiae_contig1606:17476..177601622815663.6383884-CDS-L-elsbetiae_contig1606:17476..17760Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1606 17477..17760 -
1691683023.160381-CDS-L-elsbetiae_contig1606:17476..177601691683023.160381-CDS-L-elsbetiae_contig1606:17476..17760Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1606 17477..17760 -
1622815663.6491551-CDS-L-elsbetiae_contig1606:18009..189971622815663.6491551-CDS-L-elsbetiae_contig1606:18009..18997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1606 18010..18997 -
1691683023.176473-CDS-L-elsbetiae_contig1606:18009..189971691683023.176473-CDS-L-elsbetiae_contig1606:18009..18997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1606 18010..18997 -
1622815663.6619523-CDS-L-elsbetiae_contig1606:19246..193721622815663.6619523-CDS-L-elsbetiae_contig1606:19246..19372Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1606 19247..19372 -
1691683023.1845365-CDS-L-elsbetiae_contig1606:19246..193721691683023.1845365-CDS-L-elsbetiae_contig1606:19246..19372Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1606 19247..19372 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1606.4178.1

>prot_L-elsbetiae_contig1606.4178.1 ID=prot_L-elsbetiae_contig1606.4178.1|Name=mRNA_L-elsbetiae_contig1606.4178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=466bp
GPFLYEQRETAPPWGVGWLTNSTATVGQHADDLFSGPRGETADDQAPTDQ
QKKKLFVGMAPKSAYEEDYRAVFAPFGALIDIYVIRDRNGFSKGCAFVRY
ESVKSASDAIEALHDKHMMPGGFRTLVVTIADDRRGPQAGNSTETTTRRD
AGASGDSLFHSLSRPPSFMGSDGGGGGGGGGGSMSSLSSLAGPIRPSATV
PQPGLAALAPNAGPGDPSSAAMPGMPHFLCGGNPPQGTYVYYPYVPSLPG
QQDAAASSACPLVLGTKPHHAISVGSPAGDNSNRRSLGARGAQEDGYAGD
GTVRRFGTGGPEEKGRRWAKQPVGPTGANLFVYYLPGSLTDADLATAFAP
FGEVLSAKVYYDRDTGESKGFGFVSYTNPEEADAAIASMNGFFIGQKRLK
VVRKRGQQTGSPSNSTNSPTSVRASDLGYTSGGAGGGNGDNNIGAGLQAD
LDFLTPEGPLGQSLAR
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mRNA from alignment at L-elsbetiae_contig1606:17477..19372-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1606.4178.1 ID=mRNA_L-elsbetiae_contig1606.4178.1|Name=mRNA_L-elsbetiae_contig1606.4178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1896bp|location=Sequence derived from alignment at L-elsbetiae_contig1606:17477..19372- (Laminarionema elsbetiae ELsaHSoW15)
GGCCCCTTCTTATATGAGCAGCGAGAGACGGCTCCTCCATGGGGTGTCGG GTGGCTCACAAATTCGACCGCGACAGTGGGACAGCACGCCGACGACCTGT TTTCTGGGCCTCGAGGAGAGACGGCGGTGAGACATGTCGAACCGGTTGCC TGGTAGTGTATACCTCTGCTGGGCGGTTTATCACTCACACGCAAGAAAAA GCTTAGTCTATGAAGAGGGATCAAGGAGGGGATCAGACAACGCCATTGTG GTACATACAACCAGAGGTTGTTGCGTCGTACCGCTTCCGTTGCTCTCGTC AACAAAGAGAAGGGGGCGAGGGGAGGGGCTCCCACGGTTCTAACCTGCCT GCTCGTGACTCGCCTCAAACAGCAGGACGATCAAGCCCCCACAGACCAAC AGAAGAAAAAGCTATTCGTCGGTATGGCGCCCAAGTCCGCCTACGAAGAG GATTACAGGGCCGTGTTCGCCCCGTTTGGTGCGCTGATCGACATCTACGT CATCCGGGACAGGAACGGCTTCAGCAAGGGTTGCGCATTCGTTCGGTACG AGTCGGTGAAGAGCGCAAGCGACGCGATCGAGGCTCTTCACGACAAACAC ATGATGCCCGGAGGCTTTCGCACGCTAGTGGTGACCATCGCCGACGACCG CCGCGGCCCGCAAGCCGGTAACAGCACCGAAACCACTACCCGCCGCGATG CCGGTGCCTCCGGAGACAGCCTGTTCCACTCTCTGTCCCGACCTCCTTCC TTCATGGGGAGCGACGGCGGCGGCGGGGGGGGTGGCGGCGGAGGAAGCAT GTCTAGCTTGAGCAGCCTCGCAGGGCCCATCAGGCCTTCCGCAACGGTAC CGCAGCCAGGACTGGCAGCCCTCGCGCCCAACGCCGGACCGGGCGACCCG TCTTCTGCTGCCATGCCCGGCATGCCGCATTTCCTCTGCGGCGGGAACCC TCCCCAGGGAACGTACGTGTACTATCCATACGTGCCATCGTTGCCTGGCC AGCAGGACGCTGCTGCCTCTTCTGCTTGCCCCCTCGTACTGGGAACCAAA CCCCACCACGCAATCTCCGTCGGTTCTCCCGCGGGGGACAACAGCAACCG GCGCAGCCTTGGTGCTCGCGGGGCGCAGGAAGACGGATATGCCGGGGATG GGACGGTTCGCAGGTTCGGCACTGGAGGGCCTGAGGAAAAGGGCCGGCGC TGGGCAAAGCAGCCCGTCGGTCCCACAGGGGCAAACCTCTTCGTGTACTA CCTCCCAGGTTCTCTCACCGACGCTGATCTCGCGACGGCCTTCGCTCCGT TCGGGGAGGTGCTAAGCGCTAAGGTTTACTACGACCGAGACACCGGAGAA AGCAAGGGTTTCGGTGAGATACTTCTATTATTTTTGAATCGTGTGACATC AATTTGACTCGATTTTTAAAAAGGTTGTTATGGTGTACCGTGGCCCTTGA ACGCGCCACCTGGTTAGCTTTGGGACACTCGAGCAGAGCCCAGTGCAAGA TATACTCTCCTACATACATAGGTGTGGTGCGAAGTCGTACACCTTTACGG ACCGGCACTCATCGTACCGTGCTGCTATGTCGATGTACCTTCGCCTCAAA ATACGCATGTAGGCTTCGTGAGCTACACCAACCCCGAAGAGGCGGACGCC GCGATTGCTAGTATGAACGGTTTCTTCATCGGGCAAAAGCGTCTCAAGGT CGTCCGGAAACGCGGACAGCAGACGGGTAGCCCCTCCAACAGCACCAACA GCCCTACTAGTGTTCGGGCCAGCGATCTTGGCTACACCAGCGGTGGCGCG GGTGGAGGCAATGGTGACAACAATATCGGAGCTGGGTTACAGGCGGACCT AGATTTCTTGACGCCCGAGGGCCCTCTTGGACAGTCATTGGCGAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1606:17477..19372-

>mRNA_L-elsbetiae_contig1606.4178.1 ID=mRNA_L-elsbetiae_contig1606.4178.1|Name=mRNA_L-elsbetiae_contig1606.4178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2796bp|location=Sequence derived from alignment at L-elsbetiae_contig1606:17477..19372- (Laminarionema elsbetiae ELsaHSoW15)
GGCCCCTTCTTATATGAGCAGCGAGAGACGGCTCCTCCATGGGGTGTCGG
GTGGCTCACAAATTCGACCGCGACAGTGGGACAGCACGCCGACGACCTGT
TTTCTGGGCCTCGAGGAGAGACGGCGGGCCCCTTCTTATATGAGCAGCGA
GAGACGGCTCCTCCATGGGGTGTCGGGTGGCTCACAAATTCGACCGCGAC
AGTGGGACAGCACGCCGACGACCTGTTTTCTGGGCCTCGAGGAGAGACGG
CGGACGATCAAGCCCCCACAGACCAACAGAAGAAAAAGCTATTCGTCGGT
ATGGCGCCCAAGTCCGCCTACGAAGAGGATTACAGGGCCGTGTTCGCCCC
GTTTGGTGCGCTGATCGACATCTACGTCATCCGGGACAGGAACGGCTTCA
GCAAGGGTTGCGCATTCGTTCGGTACGAGTCGGTGAAGAGCGCAAGCGAC
GCGATCGAGGCTCTTCACGACAAACACATGATGCCCGGAGGCTTTCGCAC
GCTAGTGGTGACCATCGCCGACGACCGCCGCGGCCCGCAAGCCGGTAACA
GCACCGAAACCACTACCCGCCGCGATGCCGGTGCCTCCGGAGACAGCCTG
TTCCACTCTCTGTCCCGACCTCCTTCCTTCATGGGGAGCGACGGCGGCGG
CGGGGGGGGTGGCGGCGGAGGAAGCATGTCTAGCTTGAGCAGCCTCGCAG
GGCCCATCAGGCCTTCCGCAACGGTACCGCAGCCAGGACTGGCAGCCCTC
GCGCCCAACGCCGGACCGGGCGACCCGTCTTCTGCTGCCATGCCCGGCAT
GCCGCATTTCCTCTGCGGCGGGAACCCTCCCCAGGGAACGTACGTGTACT
ATCCATACGTGCCATCGTTGCCTGGCCAGCAGGACGCTGCTGCCTCTTCT
GCTTGCCCCCTCGTACTGGGAACCAAACCCCACCACGCAATCTCCGTCGG
TTCTCCCGCGGGGGACAACAGCAACCGGCGCAGCCTTGGTGCTCGCGGGG
CGCAGGAAGACGGATATGCCGGGGATGGGACGGTTCGCAGGTTCGGCACT
GGAGGGCCTGAGGAAAAGGGCCGGCGCTGGGCAAAGCAGCCCGTCGGTCC
CACAGGGGCAAACCTCTTCGTGTACTACCTCCCAGGTTCTCTCACCGACG
CTGATCTCGCGACGGCCTTCGCTCCGTTCGGGGAGGTGCTAAGCGCTAAG
GTTTACTACGACCGAGACACCGGAGAAAGCAAGGGTTTCGGACGATCAAG
CCCCCACAGACCAACAGAAGAAAAAGCTATTCGTCGGTATGGCGCCCAAG
TCCGCCTACGAAGAGGATTACAGGGCCGTGTTCGCCCCGTTTGGTGCGCT
GATCGACATCTACGTCATCCGGGACAGGAACGGCTTCAGCAAGGGTTGCG
CATTCGTTCGGTACGAGTCGGTGAAGAGCGCAAGCGACGCGATCGAGGCT
CTTCACGACAAACACATGATGCCCGGAGGCTTTCGCACGCTAGTGGTGAC
CATCGCCGACGACCGCCGCGGCCCGCAAGCCGGTAACAGCACCGAAACCA
CTACCCGCCGCGATGCCGGTGCCTCCGGAGACAGCCTGTTCCACTCTCTG
TCCCGACCTCCTTCCTTCATGGGGAGCGACGGCGGCGGCGGGGGGGGTGG
CGGCGGAGGAAGCATGTCTAGCTTGAGCAGCCTCGCAGGGCCCATCAGGC
CTTCCGCAACGGTACCGCAGCCAGGACTGGCAGCCCTCGCGCCCAACGCC
GGACCGGGCGACCCGTCTTCTGCTGCCATGCCCGGCATGCCGCATTTCCT
CTGCGGCGGGAACCCTCCCCAGGGAACGTACGTGTACTATCCATACGTGC
CATCGTTGCCTGGCCAGCAGGACGCTGCTGCCTCTTCTGCTTGCCCCCTC
GTACTGGGAACCAAACCCCACCACGCAATCTCCGTCGGTTCTCCCGCGGG
GGACAACAGCAACCGGCGCAGCCTTGGTGCTCGCGGGGCGCAGGAAGACG
GATATGCCGGGGATGGGACGGTTCGCAGGTTCGGCACTGGAGGGCCTGAG
GAAAAGGGCCGGCGCTGGGCAAAGCAGCCCGTCGGTCCCACAGGGGCAAA
CCTCTTCGTGTACTACCTCCCAGGTTCTCTCACCGACGCTGATCTCGCGA
CGGCCTTCGCTCCGTTCGGGGAGGTGCTAAGCGCTAAGGTTTACTACGAC
CGAGACACCGGAGAAAGCAAGGGTTTCGGCTTCGTGAGCTACACCAACCC
CGAAGAGGCGGACGCCGCGATTGCTAGTATGAACGGTTTCTTCATCGGGC
AAAAGCGTCTCAAGGTCGTCCGGAAACGCGGACAGCAGACGGGTAGCCCC
TCCAACAGCACCAACAGCCCTACTAGTGTTCGGGCCAGCGATCTTGGCTA
CACCAGCGGTGGCGCGGGTGGAGGCAATGGTGACAACAATATCGGAGCTG
GGTTACAGGCGGACCTAGATTTCTTGACGCCCGAGGGCCCTCTTGGACAG
TCATTGGCGAGGGCTTCGTGAGCTACACCAACCCCGAAGAGGCGGACGCC
GCGATTGCTAGTATGAACGGTTTCTTCATCGGGCAAAAGCGTCTCAAGGT
CGTCCGGAAACGCGGACAGCAGACGGGTAGCCCCTCCAACAGCACCAACA
GCCCTACTAGTGTTCGGGCCAGCGATCTTGGCTACACCAGCGGTGGCGCG
GGTGGAGGCAATGGTGACAACAATATCGGAGCTGGGTTACAGGCGGACCT
AGATTTCTTGACGCCCGAGGGCCCTCTTGGACAGTCATTGGCGAGG
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