prot_L-elsbetiae_contig160.4147.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig160.4147.1
Unique Nameprot_L-elsbetiae_contig160.4147.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length336
Homology
BLAST of mRNA_L-elsbetiae_contig160.4147.1 vs. uniprot
Match: D7G733_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G733_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 2.620e-120
Identity = 167/226 (73.89%), Postives = 198/226 (87.61%), Query Frame = 0
Query:    1 MTMYCIVWAAWWDRGEDIDIRVFLATWIHLIATAYFCLSTISAILCMVYLAREQPRPVEEGKPKRPDPVRGTRSPVPCYFRYLQHISWVLACISSMVVMSVFWMAIYDKNVPVSSMHISITILAGLMVVDQLLIASEFKIGFVWMGIYFFVVYILYNVIYYYEHDGEDRVSFEVFDWDPAPGKGALWVFLILAFFVPGFTAFHVSVYRLRERMYESYKHVIEPVEE 226
            MT+YCIVWAAWWDRGED+DIR++LATW H++ATAYF +S IS++LCM YL+RE+P PVEEGKPKRP PV+GTRSPVPCYFR+LQHISWVL CISSMVV+SVFWM IY+ +VPV+S+++S TILA LM++DQ LIA+E K  + W+G+YFFVVYI YNVIYYYEH+ EDRV+FEVFDWD  PG+  LWVFLILAF VPGFTA HV VYRLRERMY SYKH +E +EE
Sbjct:   54 MTIYCIVWAAWWDRGEDLDIRIYLATWTHMLATAYFVISLISSLLCMAYLSREKPAPVEEGKPKRPPPVKGTRSPVPCYFRWLQHISWVLTCISSMVVLSVFWMTIYESDVPVTSVYVSSTILALLMLLDQFLIATEMKFKYAWLGLYFFVVYIFYNVIYYYEHNVEDRVTFEVFDWDERPGRACLWVFLILAFGVPGFTALHVFVYRLRERMYTSYKHNLEVIEE 279          
BLAST of mRNA_L-elsbetiae_contig160.4147.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 5.320e-29
Identity = 74/224 (33.04%), Postives = 116/224 (51.79%), Query Frame = 0
Query:    1 MTMYCIVWAAWWDRGEDIDIRVFLATWIHLIATAYFCLSTISAILCMVYLA-REQPRPVEEGKP-------KRPDPVRGTRSPVPCYFRYLQHISWVLACISSMVVMSVFWMAIYDKNVPVSSMHISITILAGLMVVDQLLIASEFKIGFVWMGIYFFVVYILYNVIYYYEHDGEDRVSFEVFDWDPAPGKGALWVFLILAFFVPGFTAFHVSVYRLRERMYES 216
            + +Y + WA +W   +D +   FL  W     T YF +S +SA LC   +A      PV +G P        RP    G+  PVP   R+LQ   W  ACI S++V+S+FW A+YD +   +    +   +A +M++DQ L+A EFK+ +V     F V+YI +NV +YY    +DR+ + + DW+       ++ F  +    P F   H  ++RLRER+Y +
Sbjct:   36 LAVYFLYWAIFWRAVKDYNTGRFLTHWTWYATTTYFVVSALSAFLCWRAIAVTVASGPVRDGDPAFDAPTSSRPSDRTGSPQPVPAALRHLQLALWSTACIVSLIVVSIFWGALYDGDKLTTVDEQAHVFVACIMLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVYHN 259          
BLAST of mRNA_L-elsbetiae_contig160.4147.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 5.410e-22
Identity = 73/231 (31.60%), Postives = 120/231 (51.95%), Query Frame = 0
Query:    2 TMYCIVWAAWWDRGEDID-IRVFLATWIHLIATAYFCLSTISAILCMVYLAREQPRPVEEGKPKRPD-PVRGTRS----------PVPCYFRYL---QHISWVLACISSMVVMSVFWMAIYDKNVPVSSMHISITIL-AGLMVVDQLLIASEFKIGFVWMGIYFFVVYILYNVIYYYEHDGEDRVSFEVFDWDPAPGKGALWVFLILAFFVPGFTAFHVSVYRLRERMYES 216
            T+Y + W  +W  GEDID    F+  W   +A  YF +ST +A   +             G P   D PVRGT +          P+    R L   Q  SW +AC+ S+V+++VFW+A++D N P++S  ++  IL A +M +DQLL+A++F+   +     F +VY+ +N++++     ++RV +   DW  + G  A +  ++    VP     H  V+RLRE +YE+
Sbjct:   40 TIYFVFWCYFWPFGEDIDDAHKFVTYWGWYMAAIYFLVSTATAYSFL-------------GSPMASDGPVRGTHAVAPHRGNRNQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFD-NTPLTSTDVNAHILIAPVMAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIYET 256          
BLAST of mRNA_L-elsbetiae_contig160.4147.1 vs. uniprot
Match: D7G735_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G735_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.910e-15
Identity = 53/154 (34.42%), Postives = 91/154 (59.09%), Query Frame = 0
Query:   68 PVRGTRS-PVPCYFRYL---QHISWVLACISSMVVMSVFWMAIYDKNVPVSSMHISITIL-AGLMVVDQLLIASEFKIGFVWMGIYFFVVYILYNVIYYYEHDGEDRVSFEVFDWDPAPGKGALWVFLILAFFVPGFTAFHVSVYRLRERMYES 216
            P RG R+ P+    R L   Q  SW +AC+ S+V+++VFW+A++D N P++S  ++  IL A +M +DQLL+A++F+   +     F +VY+ +N+I++     ++RV +   DW  + G  A +  ++    VP     H  V+RLRE +YE+
Sbjct:   15 PHRGNRNQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFD-NTPLTSTDVNAHILIAPIMAIDQLLVATKFERKQMLASFSFSIVYVAFNIIFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVAFVLVPLGGLIHYCVFRLREYIYET 167          
BLAST of mRNA_L-elsbetiae_contig160.4147.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.170e-14
Identity = 45/152 (29.61%), Postives = 77/152 (50.66%), Query Frame = 0
Query:   65 RPDPVRGTRSPVPCYFRYLQHISWVLACISSMVVMSVFWMAIYDKNVPVSSMHISITILAGLMVVDQLLIASEFKIGFVWMGIYFFVVYILYNVIYYYEHDGEDRVSFEVFDWDPAPGKGALWVFLILAFFVPGFTAFHVSVYRLRERMYES 216
            RP    G+  PVP   R+LQ + W  ACI S++V+++FW                     G +++DQ L+A EFK+ ++     F V+Y+ +NV +YY    +DR+ + + DW+       ++ F  +    P F   H+ ++RLRE +Y +
Sbjct:    4 RPYDRTGSPQPVPAVLRHLQLVLWSTACIGSLIVVTIFW---------------------GALLLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVYHN 134          
BLAST of mRNA_L-elsbetiae_contig160.4147.1 vs. uniprot
Match: D7G736_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G736_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 3.000e-11
Identity = 58/238 (24.37%), Postives = 112/238 (47.06%), Query Frame = 0
Query:    4 YCIVWAAWWDRGEDIDIRVFLATWIHLIATAYFCLSTISAILCMV-YLAREQPRPVEEGKP----KRPDP-------------VRGTRSPVPCYFRYLQHISWVLACISSMVVMSVFWMAIYDKNVPVSSMHISI-TILAGLMVVDQLLIASEFKIGFVWMGIYFFVVYILYNVIYYYEHDGEDRVSFEVFDWDPAPGKGALWVFLILAFFVPGFTAFHVSVYRLRERMYESYKHVIE 222
            Y ++W   W   +   + +F   W+    TAYF LS  +A      + A  Q R  + G       RP P             +R    P+      +Q  +W +AC+ S+ V  ++W ++Y    P++S+ ++  T++A +MV DQ+L+A+ F+I  +W    F + Y++Y++++Y+    E  + + + DWD    +   +    +   +P  +  H  ++RLRE +Y + +   E
Sbjct:   36 YFLIWCFLWPL-DYTSMYLFATYWVWYTGTAYFALSFATACAHFRRWSAATQARAPDNGSAGGGSDRPGPSWSNLTGDVSTPALRTRIHPLEQAVLAIQLFTWNVACLGSLFVAIIYWSSLYTGT-PITSVDMNAHTLIAFVMVADQMLVATPFRIRDMWKAEVFAITYLVYSLLWYFL---EQELIYVILDWDRHFWEAFSYSVAGIFVLIPATSVLHYYIFRLRESIYATCRQRAE 268          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig160.4147.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G733_ECTSI2.620e-12073.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JSI9_9PHAE5.320e-2933.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMZ5_9PHAE5.410e-2231.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G735_ECTSI1.910e-1534.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G734_ECTSI2.170e-1429.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G736_ECTSI3.000e-1124.37Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 230..261
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 2..219
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 163..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..26
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 86..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 142..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 185..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..335
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 136..141
NoneNo IPR availableTMHMMTMhelixcoord: 85..107
NoneNo IPR availableTMHMMTMhelixcoord: 185..207
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 140..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig160contigL-elsbetiae_contig160:43663..48257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig160.4147.1mRNA_L-elsbetiae_contig160.4147.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig160 43488..48326 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig160.4147.1 ID=prot_L-elsbetiae_contig160.4147.1|Name=mRNA_L-elsbetiae_contig160.4147.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=336bp
MTMYCIVWAAWWDRGEDIDIRVFLATWIHLIATAYFCLSTISAILCMVYL
AREQPRPVEEGKPKRPDPVRGTRSPVPCYFRYLQHISWVLACISSMVVMS
VFWMAIYDKNVPVSSMHISITILAGLMVVDQLLIASEFKIGFVWMGIYFF
VVYILYNVIYYYEHDGEDRVSFEVFDWDPAPGKGALWVFLILAFFVPGFT
AFHVSVYRLRERMYESYKHVIEPVEEEPPKTEKEEKKEAKKEEKEKKEED
KKEKKKGKKDEAPAAAPPPPLPPQPLPPQQYYYSGYPPPPPGAGPYELGP
PPGAAPAGGAPSGDRKRDKIKDAGIALLRDLNVGL*
back to top