mRNA_L-elsbetiae_contig160.4142.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig160.4142.1
Unique NamemRNA_L-elsbetiae_contig160.4142.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: D7G728_ECTSI (Cysteine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G728_ECTSI)

HSP 1 Score: 657 bits (1694), Expect = 2.110e-232
Identity = 322/342 (94.15%), Postives = 333/342 (97.37%), Query Frame = 3
Query:  192 GVSVGIVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPGIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSLD 1217
            GVSVGIVRGF GAVGNTPLVRLGSLSDK GCEILAKAEWMNPGGSVKDRAAKYL+ DAEKKG LKPGGTVVEGTAGNTGIGLAHMCRA+GYKC+IYIPETQSKEKM+ALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAE MENAVWADQFDNPANQLAHYETTGPEILAQ GGKIDAWVAAVGTGGTLAGTSRFLKENVPGIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVT NLATCEG+IDGAFLIPDAETIAMVYNLLHYEG+FVGASSALNMVGAVKTAEAVG GNTVVSVLCDGAARYQSRLFSKSWL EKGL+ESIP+ECRYL++L+
Sbjct:   13 GVSVGIVRGFPGAVGNTPLVRLGSLSDKTGCEILAKAEWMNPGGSVKDRAAKYLIMDAEKKGVLKPGGTVVEGTAGNTGIGLAHMCRAKGYKCVIYIPETQSKEKMEALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEEMENAVWADQFDNPANQLAHYETTGPEILAQAGGKIDAWVAAVGTGGTLAGTSRFLKENVPGIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTGNLATCEGLIDGAFLIPDAETIAMVYNLLHYEGIFVGASSALNMVGAVKTAEAVGAGNTVVSVLCDGAARYQSRLFSKSWLTEKGLFESIPEECRYLITLE 354          
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: A0A2T9Z8Q6_9FUNG (PALP domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9Z8Q6_9FUNG)

HSP 1 Score: 437 bits (1124), Expect = 4.700e-146
Identity = 214/338 (63.31%), Postives = 263/338 (77.81%), Query Frame = 3
Query:  207 IVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPGIKCFAADPPGASMFAYY-TKGEMERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSLD 1217
            +  GF GA+GNTPLVR+ SLS + GC I  KAE+MNPGGSVKDRAA +LV DAE+KG LK GGTVVEGTAGNTGIGLAH+CRARGYKC+IY+P+TQSKEK++ L+ LGA+VRPVPAVPY++  NYNH AKR AE    A+W +QFDN AN+ AH ETTGPEILAQT GKID +  A GT GT AG +RFLKEN   +KC+ ADPPG+ + AY  +KG++    G SITEGIGQGR+T NL    G++DG+F IPD ETI M+Y+LL  +G ++GAS++LN+V A K A+ +G G T+V++LCDGA RYQSRLFS+SWL  K LY +IPDE +    LD
Sbjct:   19 VTNGFDGAIGNTPLVRIESLSKETGCNIYGKAEFMNPGGSVKDRAALFLVKDAEEKGLLKKGGTVVEGTAGNTGIGLAHVCRARGYKCVIYMPDTQSKEKINLLQMLGADVRPVPAVPYENPKNYNHIAKRFAESTPGAIWTNQFDNTANRQAHIETTGPEILAQTNGKIDGFTCATGTAGTFAGVTRFLKENAKDVKCYIADPPGSVLHAYIQSKGKLTDRSGSSITEGIGQGRITDNLKQDIGLVDGSFSIPDDETIRMLYSLLDKDGFYLGASTSLNVVAAYKLAKLLGPGKTIVTILCDGAYRYQSRLFSRSWLESKNLYTAIPDELKKYAVLD 356          
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: A0A507EEA6_9FUNG (PALP domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EEA6_9FUNG)

HSP 1 Score: 433 bits (1114), Expect = 1.930e-144
Identity = 215/342 (62.87%), Postives = 262/342 (76.61%), Query Frame = 3
Query:  192 GVSVGIVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPG-IKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSL 1214
            G    +VRG  GA+GNTPL+RL  LS++ GC+IL KAEWMNPGGSVKDRAA Y+V +AE  G LKPGGTVVEGTAGNTGIGLAH+CR++GY  +IY+P TQS+EK+D LR LGA+VRPVPAVP+ D  NYNHQAK  AE + NAVW +QFDN AN+ AH ETTGPEI  QTGG +D +V A GTGGTLAGT+R+LKE   G +K F ADPPG+ ++AY  +G++ R+   SITEGIGQGR+T NLA    +ID A  IPDAETI MVY LL  EG+F+GASSALN+V A K A+ +G G  + +++CDGAARYQSRLFSK+WL  KGL ++IP      + L
Sbjct:   21 GTDATVVRGLVGAIGNTPLIRLSKLSEQTGCDILGKAEWMNPGGSVKDRAALYVVKNAEGLGLLKPGGTVVEGTAGNTGIGLAHVCRSKGYNLVIYMPNTQSQEKIDLLRMLGADVRPVPAVPFTDPANYNHQAKAFAESLSNAVWTNQFDNVANRQAHIETTGPEIWRQTGGNLDGFVCATGTGGTLAGTARYLKEKSDGQVKVFIADPPGSVLYAYKKEGQLTRTGDSSITEGIGQGRLTDNLAPDWELIDDAVHIPDAETIEMVYRLLDEEGIFIGASSALNVVAAAKMAQQLGPGKRIATMICDGAARYQSRLFSKAWLESKGLLDAIPQHLHKYILL 362          
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: A0A8H3TV40_9TREE (PALP domain-containing protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TV40_9TREE)

HSP 1 Score: 432 bits (1112), Expect = 7.220e-144
Identity = 225/370 (60.81%), Postives = 280/370 (75.68%), Query Frame = 3
Query:  114 SISVNRVRLSGRTSTSTMSAXXXXXXGVSVG--IVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPG-IKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSL 1214
            SI+V R    G      M++      G+++G   V GF GAVGNTPL+RL  LS++ GC ILAKAE+M+PGGS+KDRAA +LV DAE KG LKPGGTVVEGTAGNTGIGLAH+CR++GY+C+IY+P+TQS+EK+D LR LGA+VRPVPAV + +  NYNHQAKR AE +ENAVW +QFDN AN+ AH +TTGPEI  QT GK+DA+  A GTGGTLAGT R+LKE   G +K + ADPPG+ ++     G+ ER   GSITEGIGQGR+TANLA    ++DGAF IPDAE+I MVY LL  EGL+VGASSALN+V A + A+ +GKG+TVV++LCDGA RYQ+RLFS+ WL  K L  +IP+  +  V L
Sbjct:   12 SINVGRTAAGGAAKRG-MASTNHAALGLAIGGKEVHGFVGAVGNTPLIRLSKLSEETGCNILAKAEFMSPGGSIKDRAALFLVKDAEAKGLLKPGGTVVEGTAGNTGIGLAHVCRSKGYRCVIYMPDTQSQEKIDLLRMLGADVRPVPAVAFDNPQNYNHQAKRHAESLENAVWTNQFDNTANREAHIKTTGPEIWRQTDGKVDAFTCATGTGGTLAGTVRYLKEISDGRVKGYLADPPGSVLYKLVETGKAEREGSGSITEGIGQGRLTANLAPDLDLLDGAFHIPDAESIKMVYRLLDEEGLYVGASSALNVVAATEAAKRLGKGSTVVTMLCDGAYRYQTRLFSRVWLQSKKLDSAIPEHLQKYVVL 380          
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: A0A068RGA4_9FUNG (Cysteine synthase n=3 Tax=Mucorales TaxID=4827 RepID=A0A068RGA4_9FUNG)

HSP 1 Score: 431 bits (1107), Expect = 1.900e-143
Identity = 214/342 (62.57%), Postives = 270/342 (78.95%), Query Frame = 3
Query:  192 GVSVGIVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPGIKCFAADPPGASMFAYYTKGE--MERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDEC-RYLV 1208
            GV  GI +GF GA+GNTPL+RL  LS++ G EILAKAE+MNPGGSVKDRAA Y+V DAE++G +KPGGTVVEGTAGNTGIGLAH+CRA+GYKC+IY+P TQS+EK+D LR LGAEV PVPAV + +  NYNHQA+R AE +ENAVW +QFDN AN+ AH ETTGPEI AQT G +D +  A GTGGT AGT+R+LK   P IK + ADPPG+ + +Y+  G   M+R+ GGSITEGIGQGR+T N+A   G++DG+F +PD E+IAM+Y LL  EG+++GASSALN+V AVK A+ +G G  +V+++ DGA RYQSRLFS+ WL  K L ++IPD   +Y+V
Sbjct:   17 GVRPGITKGFVGAIGNTPLIRLNRLSEETGSEILAKAEFMNPGGSVKDRAALYVVKDAEERGLIKPGGTVVEGTAGNTGIGLAHVCRAKGYKCVIYMPNTQSQEKIDLLRMLGAEVHPVPAVAFDNPQNYNHQARRHAEELENAVWTNQFDNTANRRAHIETTGPEIWAQTEGLVDGFTCATGTGGTFAGTARYLKTQNPNIKAYVADPPGSVLHSYFQSGGKLMDRA-GGSITEGIGQGRITDNMAQDVGIVDGSFNVPDEESIAMLYRLLDEEGIYLGASSALNVVAAVKLAKELGTGKRIVTIMADGAYRYQSRLFSRQWLESKNLEKAIPDHLQKYIV 357          
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: A0A1X2G6Y3_9FUNG (Cysteine synthase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2G6Y3_9FUNG)

HSP 1 Score: 431 bits (1107), Expect = 1.900e-143
Identity = 211/337 (62.61%), Postives = 267/337 (79.23%), Query Frame = 3
Query:  207 IVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPG-IKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSL 1214
            I  G  GA+GNTPL+RL  +S+++G +IL KAEWMNPGGSVKDRAA ++V DAE+KG ++PGGTVVEGTAGNTGIGLAH+CRA+GYKC+IY+P TQS+EK+D LR LGAEV PVPAV + +  NYNHQA+R AE +ENAVW +QFDN AN+ AH ETTGPEI+AQT G++D +V A GTGGTLAGT+R+LKE     +K F ADPPG+ +++Y+T G+ +R EGGSITEGIGQGR+T NL   + +IDGAF IPD E++ M+Y LL  EG++VGASSALN+V A K A+ +G G  +V++LCDGA RYQSRLFS+ WL  K L  +IP+  +  V L
Sbjct:   23 ITPGLIGAIGNTPLIRLNRVSEEVGSDILCKAEWMNPGGSVKDRAALFVVKDAEEKGLIRPGGTVVEGTAGNTGIGLAHVCRAKGYKCVIYMPNTQSQEKIDLLRMLGAEVHPVPAVAFDNPENYNHQARRHAESLENAVWTNQFDNIANRRAHIETTGPEIMAQTNGEVDGFVCATGTGGTLAGTARYLKEQKGDKVKVFLADPPGSVLYSYFTTGKFDR-EGGSITEGIGQGRITDNLDQDKDLIDGAFCIPDEESVHMLYRLLDEEGIYVGASSALNVVAAAKMAKQLGPGKKIVTILCDGAYRYQSRLFSRQWLESKKLLTAIPEHLQKYVVL 358          
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: A0A067CBT4_SAPPC (Cysteine synthase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CBT4_SAPPC)

HSP 1 Score: 427 bits (1098), Expect = 2.150e-142
Identity = 217/337 (64.39%), Postives = 258/337 (76.56%), Query Frame = 3
Query:  204 GIVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPGIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSL 1214
            GI RGF GAVG TPL++LGSLS   GC ILAKAE+MNPGGSVKDRAA Y+V D EK G L PGGTVVEGTAGNTGIGLAH+C A+GY C+IY+P+TQS EK++ALR LGA+VRPVPAVP+ D  NYNHQA+  AE + NAVW +QFDN AN+ AHYETTGPEI AQT G +DA+  A GTGGTLAGT+ +LKE  P ++   ADPPG+ ++ +     +ER   GSITEGIGQGRVT NL      ID A  I D  +I MVY LL  EG+FVGASS LN+  AV  A+A+G G+T+V++LCD AARYQSRLFS+SWL  KGL E++P +CR LVSL
Sbjct:    4 GITRGFLGAVGRTPLIKLGSLSALTGCNILAKAEFMNPGGSVKDRAALYVVEDQEKAGLLLPGGTVVEGTAGNTGIGLAHVCAAKGYHCVIYMPDTQSAEKIEALRILGADVRPVPAVPFTDPRNYNHQARAYAESVPNAVWTNQFDNVANRRAHYETTGPEIFAQTQGDVDAFTCATGTGGTLAGTALYLKERKPSVRIVLADPPGSVLYRHVLDNVLERQGTGSITEGIGQGRVTDNLRGAP--IDDAVHIEDHRSIEMVYRLLKDEGIFVGASSGLNVTAAVDVAKAMGPGHTIVTILCDSAARYQSRLFSRSWLDAKGLLEAVPVDCRALVSL 338          
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: A0A0B7MV65_9FUNG (PALP domain-containing protein n=7 Tax=Mucorineae TaxID=1344963 RepID=A0A0B7MV65_9FUNG)

HSP 1 Score: 426 bits (1096), Expect = 9.280e-142
Identity = 223/367 (60.76%), Postives = 276/367 (75.20%), Query Frame = 3
Query:  123 VNRVRLSGRTSTSTMSAXXXXXXGVSVGIVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENV-PGIKCFAADPPGASMFAYYTKGE--MERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSL 1214
            +N +RL  R + +T+        G   GI  GF GA+GNTPL+RL  LSD+ G EILAKAE+MNPGGSVKDRAA ++V DAE+KG +KPGGTVVEGTAGNTGIGLAH+CRA+GYKC+IY+P TQS+EK+D LR LGAEV PVPAV + +  NYNHQAKR AE + NAVW +QFDN AN+ AH ETTGPEI AQT G++D +V A GTGG+LAGT+R+LK      +K F ADPPG+ +++Y+T G    ERS G SITEGIGQGRVT NL+    +IDGA  I D +TI M+Y LL  EG++VGASSALN+V A++ A+ +GKG  VV++LCDGA RYQSRLFS++WL  K L  +IPD  +  V L
Sbjct:    1 MNPLRLVARRAYTTI------HPGGYPGITNGFIGAIGNTPLIRLNRLSDETGSEILAKAEFMNPGGSVKDRAALFVVKDAEEKGLIKPGGTVVEGTAGNTGIGLAHVCRAKGYKCVIYMPNTQSQEKIDLLRMLGAEVHPVPAVAFDNPENYNHQAKRHAESLHNAVWTNQFDNTANRRAHIETTGPEIFAQTNGEVDGFVCATGTGGSLAGTARYLKSKKGENVKIFLADPPGSVLYSYFTSGRKLFERS-GSSITEGIGQGRVTDNLSPDVDLIDGAVNIKDEDTIKMLYRLLDEEGIYVGASSALNVVAAIEMAKQLGKGKKVVTLLCDGAYRYQSRLFSRNWLDSKNLSSAIPDHLQKYVVL 360          
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: A0A168GTK5_MUCCL (PALP domain-containing protein n=8 Tax=Mucorineae TaxID=1344963 RepID=A0A168GTK5_MUCCL)

HSP 1 Score: 425 bits (1092), Expect = 3.710e-141
Identity = 217/340 (63.82%), Postives = 265/340 (77.94%), Query Frame = 3
Query:  204 GIVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENV-PGIKCFAADPPGASMFAYYTKGE--MERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSL 1214
            GI  GF GA+GNTPL+RL  LS++ G EILAKAE+MNPGGSVKDRAA ++V DAE+KG ++PGGTVVEGTAGNTGIGLAH+CRA+GYKC+IY+P TQS+EK+D LR LGAEV PVPAV + +  NYNHQAKR AE +ENAVW +QFDN AN+ AH ETTGPEI AQT G++D +V A GTGG+LAGT+R+LK+     +K F ADPPG+ +++Y+T G    ERS G SITEGIGQGR+T NL     +IDGA  I D +TI MVY LL  EG++VGASSALN+V AV+ A+ +GKG  VV++LCDGA RYQSRLFS+ WL  K L  +IPD  +  V L
Sbjct:   22 GITNGFIGAIGNTPLIRLNRLSEETGSEILAKAEFMNPGGSVKDRAALFVVKDAEEKGLIQPGGTVVEGTAGNTGIGLAHVCRAKGYKCVIYMPNTQSQEKIDLLRMLGAEVHPVPAVAFDNPENYNHQAKRHAESLENAVWTNQFDNTANRRAHIETTGPEIFAQTNGEVDGFVCATGTGGSLAGTARYLKDKKGDDVKIFLADPPGSVLYSYFTSGHKLFERS-GSSITEGIGQGRITDNLGPDVDLIDGAVNIKDEDTIKMVYRLLDEEGIYVGASSALNVVAAVEMAKQLGKGKKVVTLLCDGAYRYQSRLFSRQWLDAKNLSSAIPDHLQKYVVL 360          
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Match: A0A2T9Y8M8_9FUNG (PALP domain-containing protein n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9Y8M8_9FUNG)

HSP 1 Score: 424 bits (1091), Expect = 4.410e-141
Identity = 208/338 (61.54%), Postives = 259/338 (76.63%), Query Frame = 3
Query:  207 IVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGGSVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCIIYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENAVWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRFLKENVPGIKCFAADPPGASMFAYY-TKGEMERSEGGSITEGIGQGRVTANLATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEAVGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSLD 1217
            +  GF G +GNTPL+++ SLS++ GC I  KAE+MNPGGSVKDRAA +LV DAE+KG LK GGTVVEGTAGNTGIGLAH+CRARGYKC+IY+P+TQSKEK++ L+ LGA+VRPVPAV Y++  NYNH AKR AE    AVW +QFDN AN+ AH ETTGPEILAQTGGKID +  + GTGGT AG + FLK+NV  IKC+ ADPPG+ +  Y  TKG +    G SITEGIGQGR+T NL     ++DG+  IPD +TI M+Y LL  +GL+ GAS++LN+V A + A+ +G G T+V++LCDGA RYQSRLFS+SWL  K LY+ IPD  +  V L+
Sbjct:   19 VANGFDGTIGNTPLIKIKSLSEETGCNIYGKAEFMNPGGSVKDRAALFLVKDAERKGLLKKGGTVVEGTAGNTGIGLAHVCRARGYKCVIYMPDTQSKEKINLLQMLGADVRPVPAVAYENPQNYNHIAKRYAESTSGAVWTNQFDNIANRQAHIETTGPEILAQTGGKIDGFTCSTGTGGTFAGITSFLKQNVDDIKCYIADPPGSVIHNYIQTKGTIGGRSGSSITEGIGQGRITMNLQPDINLVDGSLYIPDEKTIKMLYRLLDEDGLYFGASTSLNVVAAYELAKILGPGKTIVTILCDGAYRYQSRLFSRSWLESKNLYDKIPDNLKKYVVLE 356          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig160.4142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G728_ECTSI2.110e-23294.15Cysteine synthase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A2T9Z8Q6_9FUNG4.700e-14663.31PALP domain-containing protein n=1 Tax=Smittium me... [more]
A0A507EEA6_9FUNG1.930e-14462.87PALP domain-containing protein n=2 Tax=Spizellomyc... [more]
A0A8H3TV40_9TREE7.220e-14460.81PALP domain-containing protein n=1 Tax=Naganishia ... [more]
A0A068RGA4_9FUNG1.900e-14362.57Cysteine synthase n=3 Tax=Mucorales TaxID=4827 Rep... [more]
A0A1X2G6Y3_9FUNG1.900e-14362.61Cysteine synthase n=1 Tax=Hesseltinella vesiculosa... [more]
A0A067CBT4_SAPPC2.150e-14264.39Cysteine synthase n=2 Tax=Saprolegnia TaxID=4769 R... [more]
A0A0B7MV65_9FUNG9.280e-14260.76PALP domain-containing protein n=7 Tax=Mucorineae ... [more]
A0A168GTK5_MUCCL3.710e-14163.82PALP domain-containing protein n=8 Tax=Mucorineae ... [more]
A0A2T9Y8M8_9FUNG4.410e-14161.54PALP domain-containing protein n=1 Tax=Smittium si... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig160contigL-elsbetiae_contig160:6936..14402 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score658.3
Seed ortholog evalue2.3e-186
Seed eggNOG ortholog2880.D7G728
KEGG rclassRC00020,RC02814,RC02821
KEGG koko:K01738
KEGG ReactionR00897,R03601,R04859
KEGG Pathwayko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00021
Hectar predicted targeting categoryother localisation
GOsGO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.cysteine synthase activity
EggNOG OGsCOG0031@1,KOG1481@2759
EC2.5.1.47
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionCysteine synthase
Ec32 orthologEc-01_011260.1
Exons11
Model size1983
Cds size1197
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815659.9037793-UTR-L-elsbetiae_contig160:6935..69581622815659.9037793-UTR-L-elsbetiae_contig160:6935..6958Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig160 6936..6958 +
1691683020.6124759-UTR-L-elsbetiae_contig160:6935..69581691683020.6124759-UTR-L-elsbetiae_contig160:6935..6958Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig160 6936..6958 +
1622815660.0585515-UTR-L-elsbetiae_contig160:13639..144021622815660.0585515-UTR-L-elsbetiae_contig160:13639..14402Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig160 13640..14402 +
1691683020.7567983-UTR-L-elsbetiae_contig160:13639..144021691683020.7567983-UTR-L-elsbetiae_contig160:13639..14402Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig160 13640..14402 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815659.914622-CDS-L-elsbetiae_contig160:6958..70191622815659.914622-CDS-L-elsbetiae_contig160:6958..7019Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 6959..7019 +
1691683020.6242635-CDS-L-elsbetiae_contig160:6958..70191691683020.6242635-CDS-L-elsbetiae_contig160:6958..7019Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 6959..7019 +
1622815659.9285433-CDS-L-elsbetiae_contig160:7649..78001622815659.9285433-CDS-L-elsbetiae_contig160:7649..7800Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 7650..7800 +
1691683020.6332462-CDS-L-elsbetiae_contig160:7649..78001691683020.6332462-CDS-L-elsbetiae_contig160:7649..7800Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 7650..7800 +
1622815659.9414198-CDS-L-elsbetiae_contig160:8632..87001622815659.9414198-CDS-L-elsbetiae_contig160:8632..8700Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 8633..8700 +
1691683020.6424696-CDS-L-elsbetiae_contig160:8632..87001691683020.6424696-CDS-L-elsbetiae_contig160:8632..8700Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 8633..8700 +
1622815659.9519506-CDS-L-elsbetiae_contig160:8897..91141622815659.9519506-CDS-L-elsbetiae_contig160:8897..9114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 8898..9114 +
1691683020.6526184-CDS-L-elsbetiae_contig160:8897..91141691683020.6526184-CDS-L-elsbetiae_contig160:8897..9114Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 8898..9114 +
1622815659.964739-CDS-L-elsbetiae_contig160:9471..95471622815659.964739-CDS-L-elsbetiae_contig160:9471..9547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 9472..9547 +
1691683020.666806-CDS-L-elsbetiae_contig160:9471..95471691683020.666806-CDS-L-elsbetiae_contig160:9471..9547Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 9472..9547 +
1622815659.9759212-CDS-L-elsbetiae_contig160:9893..99181622815659.9759212-CDS-L-elsbetiae_contig160:9893..9918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 9894..9918 +
1691683020.6839714-CDS-L-elsbetiae_contig160:9893..99181691683020.6839714-CDS-L-elsbetiae_contig160:9893..9918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 9894..9918 +
1622815659.9888244-CDS-L-elsbetiae_contig160:10585..107231622815659.9888244-CDS-L-elsbetiae_contig160:10585..10723Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 10586..10723 +
1691683020.6977782-CDS-L-elsbetiae_contig160:10585..107231691683020.6977782-CDS-L-elsbetiae_contig160:10585..10723Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 10586..10723 +
1622815660.0022151-CDS-L-elsbetiae_contig160:11395..114871622815660.0022151-CDS-L-elsbetiae_contig160:11395..11487Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 11396..11487 +
1691683020.7115264-CDS-L-elsbetiae_contig160:11395..114871691683020.7115264-CDS-L-elsbetiae_contig160:11395..11487Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 11396..11487 +
1622815660.0163236-CDS-L-elsbetiae_contig160:12169..122771622815660.0163236-CDS-L-elsbetiae_contig160:12169..12277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 12170..12277 +
1691683020.7226772-CDS-L-elsbetiae_contig160:12169..122771691683020.7226772-CDS-L-elsbetiae_contig160:12169..12277Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 12170..12277 +
1622815660.031472-CDS-L-elsbetiae_contig160:12764..129001622815660.031472-CDS-L-elsbetiae_contig160:12764..12900Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 12765..12900 +
1691683020.7312577-CDS-L-elsbetiae_contig160:12764..129001691683020.7312577-CDS-L-elsbetiae_contig160:12764..12900Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 12765..12900 +
1622815660.045847-CDS-L-elsbetiae_contig160:13514..136391622815660.045847-CDS-L-elsbetiae_contig160:13514..13639Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 13515..13639 +
1691683020.7408621-CDS-L-elsbetiae_contig160:13514..136391691683020.7408621-CDS-L-elsbetiae_contig160:13514..13639Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig160 13515..13639 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig160.4142.1prot_L-elsbetiae_contig160.4142.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig160 6959..13639 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig160.4142.1

>prot_L-elsbetiae_contig160.4142.1 ID=prot_L-elsbetiae_contig160.4142.1|Name=mRNA_L-elsbetiae_contig160.4142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=399bp
MLLPISLGFISSAIRSPHQVARPFSWAICNSISVNRVRLSGRTSTSTMSA
STSAATGVSVGIVRGFSGAVGNTPLVRLGSLSDKIGCEILAKAEWMNPGG
SVKDRAAKYLVTDAEKKGALKPGGTVVEGTAGNTGIGLAHMCRARGYKCI
IYIPETQSKEKMDALRGLGAEVRPVPAVPYKDEMNYNHQAKRCAEGMENA
VWADQFDNPANQLAHYETTGPEILAQTGGKIDAWVAAVGTGGTLAGTSRF
LKENVPGIKCFAADPPGASMFAYYTKGEMERSEGGSITEGIGQGRVTANL
ATCEGMIDGAFLIPDAETIAMVYNLLHYEGLFVGASSALNMVGAVKTAEA
VGKGNTVVSVLCDGAARYQSRLFSKSWLAEKGLYESIPDECRYLVSLD*
back to top

mRNA from alignment at L-elsbetiae_contig160:6936..14402+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig160.4142.1 ID=mRNA_L-elsbetiae_contig160.4142.1|Name=mRNA_L-elsbetiae_contig160.4142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7467bp|location=Sequence derived from alignment at L-elsbetiae_contig160:6936..14402+ (Laminarionema elsbetiae ELsaHSoW15)
TCAGCGTTTCAAACTTCTTATCAATGCTCCTTCCTATCTCGCTGGGTTTT ATCTCATCAGCCATTCGTTCTCCACATCAAGTCGGTGAGATATTTGTGTT CGAGGTCGCATACTACCATGTTCTGGGGTTGTACATAACTGCACCAAGGA AGATAGCGAGGCATGGAGGGCACCTTACATAGCTCCCCTGCTCTTCCCGA GTCTTGTTCTGGCTCTGTTTCGATATATGGGCATGGAAATGCGACTCGCA ACAGCGGACGCGTGCGAAGAATCGAACAGAAACACAACATGCACCATTTT CGTTCATGAAAGAAAAAAACTGCACTGGCTTTCCAGAGGCAAAGCCCCCC CGTTCCTACAAAAACGTTGCGTGATTAGACTACCTAGCTCGAGAGGGGCG GATCTTCTGTGCGAGAGATCACTCTCCCTCCGTAACGCAAGAACTCTTGA TTGTTCTTTTGGTACAGGTACATATCTATGAATGTCCGTGCATTTGTTCT TCCTAACATGTACCGAATGTACATCGCACGCACACACGAGGCATTTGTAT CCAATCCACAGCAAGGCACACGATCGGTGTCCGAGTACCTACCTTCCCAG CGACCGTCTCTCGCTGCTTCAAGGCTCTTGGCTACTGCAACTCCTCTTGC GGGGGAGAGACCAGGGTTAACTAACACTTCGACCCTCGCGCTCGACCCCC GGGCCCAAACCCAGCGAGGCCCTTTTCTTGGGCGATCTGCAACAGCATCA GCGTCAACCGCGTTAGGTTGAGCGGACGGACGAGTACGTCCACCATGTCC GCCTCCACCTCTGCTGCCACCGGCGTGTCCGTGGGCATTGTGCGGGGCTT TTCGGGGGCTGTAGGGTGAGTCGCTGAGGGCTCCGGCTGCTGCACATATG CGTGATTACTACTGCATCTTTTGCAACATGCAGCACGACTGCTGCTGTGG TTTCTCCGCGCAAGGTAGAAACTAGAGTCTACAGCAGTGATCCATTTGCG ATAACTGTCTGTCGTACCTGTGTCCTCTAGACAGTAGTTCGATCCCTCCC CAGGCGTTGGTTTTGCTTTACTGCATACCTTGAACACACAAACAGGCGTT TTATTGTTTTTTTGAGCTGCTCGGCCTGGGCAGCTTCCATGATGTCTTTG CTCCCAGGCCTTCCTCCCTGCGCAATTGCAGCACTAGGAAATGCTCGCCA CATCTTGTAGCAGCGGCCGGGGAATACGGCGGTATGCAGTCTTCGCCACT TTTCGTGATCCGTCTAGGGAAGCCCGTGTCTACGTAGAGTTTTACGTCCG CCACCCCTCTATCCCCTCGCAGATGAGTGGCCTTCTGCAGTGTAGAGAAG GGATGTGCGGCATCCTTCCAGAGAAGGGGTCCACGCAGACAGAGTATGTA GACGCACGGCCTGGCAACAATGCTCCATAACCCTGTGTAGTACTGCTGAA CACGGCACAGACATAGAAACGCGCTTGGAAGGGAGGCGCTGCTTCTGGGC GCGCTCATCACGCCAAAGATGTACCTTCAATAACGCTTTACTCCGCACGC TTTACTCCGCTCGCCTCGCCACTCGCCCCCCCTCGTTGTTTGACTGCCTC GTGCCGCGTTGTGCCCGGTGCTCGGTTTCGTGTGTTGTGCGCTGTGTTCT GTTGTATATACCCTGCTGGACGGTGGATGGACGAATGGAAACCACAGGAA TACCCCTCTGGTGCGCCTGGGAAGCCTCAGCGACAAAATCGGCTGCGAGA TCCTCGCGAAAGCAGGTTAGAATCTTCACCTTTTTGATATTAGATTCGAA CCAGGCCTGTTGCAATCAAGGTTATACAGCTATGCGTAGAAGTTCTGCTT CAAGGATTCCTGCTACTGGTGTACTGCCATAGAGAAGTAGTAGAAAGGTT GTTTAGAGTCCAAAATAAAAGGCTTCGGTATTCATCCCCTCCTTTCAAAT TGATATTTGCAGAGTGGATGAATCCGGGGGGCTCCGTGAAGGACCGCGCC GCAAAGTACCTCGTGACCGACGCCGAGAAGAAAGGCGCCCTCAAGCCCGG GGGCACCGTCGTTGAAGGAACGGCAGGCAACACCGGGATCGGGCTCGCCC ACATGTGCCGCGCGAGGGGCTACAAGTGCATCATCTACATCCCCGAGACC CAGAGCAAGGAGAAAATGGACGCCCTGAGGTTCGCTTGCCATGCTTTCTT TGAAGCGTTAGAGCAATAGACCCGAGGACACGTGGTTGGATGATGACAAA TTCGTTTCGAAGTACGATATGATGTGGTGTGTTATGGTGTGACACGATCA AAGATGGCTGCGTGTCAATGCTCGTTTTTGAACGGGCCGATGGGTGTGTA CACGTGAAATACGATTCGTGCGCGTTGAGCTTGTTATTTTCAGGCTTATG TATGTATGGCGTGCGATGACGCGTGTTTCTCGCAGAGGGTACATCTCATC TCGTTTTGTGTTATTGTCTTGCCGGTTTCGGCGTTCCTTCGTGCGTGACA CCATCACCACCATCATGACCATGATCGCGACGTCAGGGGGCTCGGGGCCG AGGTTCGGCCGGTGCCAGCGGTGCCGTACAAGGACGAGATGAACTACAAC CACCAGGCTAAGGTGTGCACCGCGATTCACTACGAGATAAACATACTTAG AAGTATGTACATAAAAGCATCGTCGACTGCACGGACGTTGGATGGCAGAA GGAGTCTACGTATGTATGTCTGTCACGACGTCATGGATGTCAAGTCCCGC TGCCATGCCGACGACAAATGACGAGAGCTCGCGTATCTATTTGTACACCT CGGCGCTTGCTGTTGAAACATTGCCATGGTATAGATCAACTCGTATGTCC ACCTGTGCCTATTCCTGTGTGCCCACGTCAACTCGATGGGTCTCGGGATG GGTGGCGTGGCGTGGACTTCGGGATCGACCGCTCTGACCGCCGTCGTCAT CCTTTCAGCGCTGCGCCGAGGGCATGGAGAACGGTATGTCGAAAACTTGA TTTGTTCTTATTGTTTTTCATCTTAAGTCCTTGAATTCTTAATTTTGCCT CGGTCGGTTTATTCCCGGTTGGGCGGAGCTCTTCTAGGCGCTGCCTTGAG CCTGGTCTCGAGGTGGTGAGCAGAGTCTTGGGCATGAATAGATGCGAGTT TGTTGAAAGAGACGCTGCAGGTTTGCGTCGGGCACCATGCGGATATCTTC ATGTCCGGCCCTAGTGCCGGTCGTTGCTGCGGCCGACAACCGAAAAGCGT TTCGCATGGTTGATATTGGCGTTGTGCCATTTTTCTCGCGAGCGATGGAG GACAGGATGCCCCCGCCACGGTTACCGGCTAGCCCAGTGTTGTCTCGCCT CTAGCTATCTGTTGCTGCTCACCTATATATATGCATACATCGCCTCACTC ACCTCCTCCGCAACGAGGGAGATTATTATTTATGCATTTCGAGCGTCCGT CGCCCGAACAACCAAAAGCGTGCAGACAGATAAGCCCTAGGCGGTGACAT ACATGCCTAGCCTGTATATTTCAGGGAGCCTCGAAGCTGCGACGATGCAA TGCATGACCTTGACCCAGACTATACCGTTCTCACTGCCCCATCCCAACAC AAATTTGTTCCGTGCAAATACGCCAACTACTACTGTATGGGGTACGAAAG CTGTGTGGGCCGATCAGTTCGACAACCCAGCGAATCAACTCGCTCACTAC GAGACGACGGGGCCGGAGATCCTGGCGCAGACGGGCGGGAAGATCGACGC TTGGGTAGCGGCTGTGGGGACTGGCGGCACGCTCGCAGGTGTGGTTGATT GACGTCTTGGGGGTATCGCGGTGCGATAGCCGACAAGAGCGGGGGGGTGC CATGCCATGGGGCACAAGAAACCTCTGGCCAGAGAGGCTCACGAAGTATT CGCTGAAATGCGAGACAGCTGCTGAACTCTAGTTTTTTTTAGTCTTTCTC GACCGTGTTGGTTCGGAGACAATAGTGTAGGAGAGATAAGGAGACCCACC AAAAGGATTGAGCGGCATTTTGTGCGGGTTCTCTTTATTTTACTTTTGGC AACAAGCTTGTCTTTTTTTGCTGTCCTTCCAAAACCGCGGTAGATTTTCT TGGAAAAGGGGCTTGGCTAGGCGAAGGAGGTTTGTTTTTACGGTGGTGTG GTCAGCGAATCTCGGTAGCTGCTGTTTGAGTACTTGCCACGGCCTGTTCT GCCTCTTTATGTTGCAATAGTATGTAACGCCACGACTGCTCTGCAGCCCA TTATCCCTTTGGGGGCTAAAATGAGGAGTCTGTTGGGGCGCAAATATGAT AATGTATCTTGTTTGCGGTGTTATCTAGCTTCAGATTCGATGCGGTGGTA AAGTATACCCTCCCTCCCTCTTGTTTCACGTCCACACCACGTCACGCGCC ATCATCAAACATCATACTCTAGTACACGTCTCTCGGTTTCTTGTTACATG TCATATCAAGGCACTTCGCGCTTTTTAAAGGAGAACGTGCCGGGGATCAA GTGCTTCGCGGCCGACCCCCCGGGAGCCTCGATGTTTGCCTACTACACCA AGGTGCGAGTGACGAAATCAAGCGGTCACGGCGTTTTTTGAGCCAGCTCT TGGCGGCTCTGCTGCTGTTGAAGTGCTGCCCTCAGCGCTGAGCGTTGGTT TGTTCCAGGTATACTGTATACCCTGTACCGACGAATCGTTGCGGAGTTTT GCCTGTTGGTGTCGACCGTTTTTCGTGGCATTTGTCGGTACGCGCATCCT TGCTTGCGGCGGCTCAAAGACAGAACGGAACCGGTGCTGCTAGTGACGGC TTGTTTCGTGTTACGCGAGATGGCAAGGTTGTGTTGTTTGTAGCGCGTTG GGCGGAGGAGAGCGTTCCATTCCAACGTAGTTCGCTGGAATGCGCTTTGA TGGTAGGAGTGGCGAAGAGGGCGACGCAGTTATCAATGGCCTTTCCAGGC AAGACCACGGAGCACCTTTTGCCGATGGGTCAAATGAGTAGGTATGTTTT TGCCTCCATGCTCTCGAACGAGCTGTCTTGCAGCGAGCCAGGCACATTCC GCCTGAGCGAGGCATGCGTGCAGATGGATTCACACCAGTTTTAAGTCCTT GTCTGATCGGCGATTCGGTTCACGACACACGATACGAGCGTGCCATTGAT TGTCATGCCAATTCACACGAAATCAAACTGACACTCTCCCCGATCACGCC GTATGTGCCGGAAACAATCAAACCAAAACCAAAGGGCGAGATGGAGAGGT CTGAGGGCGGGTCGATCACGGAAGGGATCGGGCAAGGGAGAGTGACCGCG AACTTGGCCACTTGCGAGGGGATGATAGACGGGGCATTTCTGGTGAGGCA AGCATAGCGAGAGAGAGGGGGGGGGGAGGGGGGTTGATTTGTCGGTGAAA CGAGAAAGCATATAAGGAAGGCCAATGGTGATTCGGCCTTGCCCTCGCCC GTCGATTTGTTTTTCAATGGTGTCAATGTACTAAGTTGCTCTTGTTGTTC GTGCTTCGATCGGAGGGAGGCAAACCCAAAAATTCAAATGCAGTAGCCCA GCAATGCCAGTGGTTGTCTTTGGTTGCAAGAGCGGGACTCCAAAGGCACC CGCGCGGTTGCTTTGTTTTCGTCGCTGTGGGAGAGTGAATGGCATGTCAG GGCAGGGCTGCGGACCTTGAGCGTTTCGTGTCAGCGAAGCTCCCTTCGCA TATAAGTAAGTGGTCTTTGCCGACCTACCGACCCCAACCTTGATTTTACG TCGCCCCCCATGCCGGGACAACACGTTTACCTGACATGGCATGATGTGAC ATGACGTATGGCTTACAATGGCGTGACAGATCCCCGACGCGGAGACGATT GCGATGGTGTACAACCTCCTCCACTACGAGGGTCTCTTCGTGGGGGCGTC GTCGGCGCTCAACATGGTCGGGGCCGTCAAGACGGCCGAGGCCGTGGGCA AGGGCAACACCGTTGGTAAGCAGAGCGTCTTGATACATCTCGGGGGGCGA ATTTCGAGGTTTGGGGCTGGTATTGTAGCGAGAGGTGTGGTGGGATTTAC AGAGAGACTATTGTACCGCTTTGGTGCATGAATACTCACACGGAAAAAAG TGTCGATGCAGAGAGGTGAGGGCGATGTTGCCGATACCTGACTGACATCG GGAGCCACTCCAGTTTTTTATGAGATGTCTTGTTCTGACAGCGACACCTC AGCGGCCTGCTTCCAAGCCGGGTCCGTCTTGCTAGGGGCGTCTGGCTGCA CCTCATATCCGATGCAAGCAAAGTCGCCCCATGTTTGGTTTCCCGCACTG ATTGGTTGTCGTAACCTCTACCGTCCGCTATTCTCGCACGCCCCCTCCTC CAAGTGGTTTATCGGCTGACTCGCGCACGCACACACCTCCACACTCACCC GACCGAACAACCATAATTTCCAAATTGTTGTCACGATTTGTACACCACAT TCCGCTCGAAACAACAGTACCATGGTTTTCGCCACTTACGTGTCCGACCC CCCCCCCCCCCCCCCCCCCCCCCCCCCTTTCTTTTTTTTTCTGCTTCTGC CGCTTGTTTGGGTACCTGTGCTACACAAGTGTCGGTGCTGTGCGATGGGG CTGCCAGGTACCAGAGCCGGCTGTTCAGCAAGTCCTGGCTCGCGGAGAAG GGCCTGTACGAGAGCATCCCGGATGAGTGCCGCTACCTCGTATCTCTCGA CTAGATTAGGAACAACGACGCCAATCACCTTTGGTGCTGGGTTTCGCGCA CGACCGCTGAACTGATTACGAAGTGAGGGGCGAGGGTATTGTAGTGAGGG GGAAAGCAACACGTTGTTTAAGAATAAAAAATTGAATCAAAGATGGAACC TAACCCACACTAGAGCAAGGAATCGATATGGGATTCAAACGGTATTCCAT ACAGTGACGTAATACTTGGCGAAGCGAGCAGGTTTTGCGGAGTGATTGCC TTTCTATTTGATGAATTTTCCTTATCCTCGACCCTGCCGCCGTGTTGTTT TGTTGTTTAGTATGTTGTTACTAGTATGCTCCATGTTTTTCCGAATCGTC CCCTGCACGACGTGTTAGAAAATGCTCTTCGTGTTTAGTTTTTTTGCTCT GTCTCCTCCCTACACCAAGCAGTTGACGTTGCTCTTGGGGGGCTTGTCAC AGGTTCGCTGTGCTGATTACGACAAGGCCACGGGGTAATTCGAATACCAA GGCACTCTTAGAATGGCGTACTTGCTCATGAAATTGAAAAGAGTGCACCT GTGTAGCTTTGGAGTACCGCGAAACGTACTGGAGTGTTAACCTTTCCGCT ATTAGAAAACGGCCAAGGGGAGAAGCGATTTATTTGGAGACAATCTCGGG GCGTCGCGACGGGTCACCACGAATGAGGCTCTTAAAAAGTAAAACACAGA AAGCAGGGTGAGACAGAAAGCACACCTGATAGTTTGATTTGGCGCAACAG GCAGCGTGGCGAACGTT
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig160:6936..14402+

>mRNA_L-elsbetiae_contig160.4142.1 ID=mRNA_L-elsbetiae_contig160.4142.1|Name=mRNA_L-elsbetiae_contig160.4142.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2394bp|location=Sequence derived from alignment at L-elsbetiae_contig160:6936..14402+ (Laminarionema elsbetiae ELsaHSoW15)
ATGCTCCTTCCTATCTCGCTGGGTTTTATCTCATCAGCCATTCGTTCTCC
ACATCAAGTCGATGCTCCTTCCTATCTCGCTGGGTTTTATCTCATCAGCC
ATTCGTTCTCCACATCAAGTCGCGAGGCCCTTTTCTTGGGCGATCTGCAA
CAGCATCAGCGTCAACCGCGTTAGGTTGAGCGGACGGACGAGTACGTCCA
CCATGTCCGCCTCCACCTCTGCTGCCACCGGCGTGTCCGTGGGCATTGTG
CGGGGCTTTTCGGGGGCTGTAGGCGAGGCCCTTTTCTTGGGCGATCTGCA
ACAGCATCAGCGTCAACCGCGTTAGGTTGAGCGGACGGACGAGTACGTCC
ACCATGTCCGCCTCCACCTCTGCTGCCACCGGCGTGTCCGTGGGCATTGT
GCGGGGCTTTTCGGGGGCTGTAGGGAATACCCCTCTGGTGCGCCTGGGAA
GCCTCAGCGACAAAATCGGCTGCGAGATCCTCGCGAAAGCAGGAATACCC
CTCTGGTGCGCCTGGGAAGCCTCAGCGACAAAATCGGCTGCGAGATCCTC
GCGAAAGCAGAGTGGATGAATCCGGGGGGCTCCGTGAAGGACCGCGCCGC
AAAGTACCTCGTGACCGACGCCGAGAAGAAAGGCGCCCTCAAGCCCGGGG
GCACCGTCGTTGAAGGAACGGCAGGCAACACCGGGATCGGGCTCGCCCAC
ATGTGCCGCGCGAGGGGCTACAAGTGCATCATCTACATCCCCGAGACCCA
GAGCAAGGAGAAAATGGACGCCCTGAGAGTGGATGAATCCGGGGGGCTCC
GTGAAGGACCGCGCCGCAAAGTACCTCGTGACCGACGCCGAGAAGAAAGG
CGCCCTCAAGCCCGGGGGCACCGTCGTTGAAGGAACGGCAGGCAACACCG
GGATCGGGCTCGCCCACATGTGCCGCGCGAGGGGCTACAAGTGCATCATC
TACATCCCCGAGACCCAGAGCAAGGAGAAAATGGACGCCCTGAGGGGGCT
CGGGGCCGAGGTTCGGCCGGTGCCAGCGGTGCCGTACAAGGACGAGATGA
ACTACAACCACCAGGCTAAGGGGGCTCGGGGCCGAGGTTCGGCCGGTGCC
AGCGGTGCCGTACAAGGACGAGATGAACTACAACCACCAGGCTAAGCGCT
GCGCCGAGGGCATGGAGAACGCGCTGCGCCGAGGGCATGGAGAACGCTGT
GTGGGCCGATCAGTTCGACAACCCAGCGAATCAACTCGCTCACTACGAGA
CGACGGGGCCGGAGATCCTGGCGCAGACGGGCGGGAAGATCGACGCTTGG
GTAGCGGCTGTGGGGACTGGCGGCACGCTCGCAGCTGTGTGGGCCGATCA
GTTCGACAACCCAGCGAATCAACTCGCTCACTACGAGACGACGGGGCCGG
AGATCCTGGCGCAGACGGGCGGGAAGATCGACGCTTGGGTAGCGGCTGTG
GGGACTGGCGGCACGCTCGCAGGCACTTCGCGCTTTTTAAAGGAGAACGT
GCCGGGGATCAAGTGCTTCGCGGCCGACCCCCCGGGAGCCTCGATGTTTG
CCTACTACACCAAGGCACTTCGCGCTTTTTAAAGGAGAACGTGCCGGGGA
TCAAGTGCTTCGCGGCCGACCCCCCGGGAGCCTCGATGTTTGCCTACTAC
ACCAAGGGCGAGATGGAGAGGTCTGAGGGCGGGTCGATCACGGAAGGGAT
CGGGCAAGGGAGAGTGACCGCGAACTTGGCCACTTGCGAGGGGATGATAG
ACGGGGCATTTCTGGGCGAGATGGAGAGGTCTGAGGGCGGGTCGATCACG
GAAGGGATCGGGCAAGGGAGAGTGACCGCGAACTTGGCCACTTGCGAGGG
GATGATAGACGGGGCATTTCTGATCCCCGACGCGGAGACGATTGCGATGG
TGTACAACCTCCTCCACTACGAGGGTCTCTTCGTGGGGGCGTCGTCGGCG
CTCAACATGGTCGGGGCCGTCAAGACGGCCGAGGCCGTGGGCAAGGGCAA
CACCGTTGATCCCCGACGCGGAGACGATTGCGATGGTGTACAACCTCCTC
CACTACGAGGGTCTCTTCGTGGGGGCGTCGTCGGCGCTCAACATGGTCGG
GGCCGTCAAGACGGCCGAGGCCGTGGGCAAGGGCAACACCGTTGTGTCGG
TGCTGTGCGATGGGGCTGCCAGGTACCAGAGCCGGCTGTTCAGCAAGTCC
TGGCTCGCGGAGAAGGGCCTGTACGAGAGCATCCCGGATGAGTGCCGCTA
CCTCGTATCTCTCGACTAGTGTCGGTGCTGTGCGATGGGGCTGCCAGGTA
CCAGAGCCGGCTGTTCAGCAAGTCCTGGCTCGCGGAGAAGGGCCTGTACG
AGAGCATCCCGGATGAGTGCCGCTACCTCGTATCTCTCGACTAG
back to top