mRNA_L-elsbetiae_contig16.4138.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig16.4138.1
Unique NamemRNA_L-elsbetiae_contig16.4138.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7FM65_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM65_ECTSI)

HSP 1 Score: 188 bits (478), Expect = 1.280e-50
Identity = 204/388 (52.58%), Postives = 234/388 (60.31%), Query Frame = 1
Query:    1 MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTVSSPLHIGCQEGELDAADLLLRWGADETALDKKARTPSARMPDIATAVAEDRPKLERLSKLLACAAQDRAWRRRSMLVLCRAHPD 1164
            M  +++R S L G G MI ++VCD ATP+QW KWLR PLEHAAGTGNA LV+KLLK GA+ SAGW+GC G++L+HAGA+GG E+V+S L RAGA + ++ +A      PLHLA  GGK AA KVLM+AGADVN LDAD                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                               K  +   + LH  C     DAADLLLRWGADETA+D    T SA +P I  A  E+ P + RL+KLL  A QDR WRRR +LV+CRAHP+
Sbjct:    1 MSTHQDRKSTLHGTGDMILDLVCDLATPRQWTKWLRVPLEHAAGTGNAALVEKLLKVGANASAGWRGCDGRTLMHAGAEGGSEQVISMLTRAGAGKYINDQAPLSGLTPLHLAVSGGKLAATKVLMLAGADVNRLDAD---------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHALDAGHISTVNVSLGWGCLWLEPTSKTCIAGRPPLCVSTFSISYFAAMLALLKLGADLHAKCPHNGMTALHTACHVVNPDAADLLLRWGADETAVDWNGATTSAVIPRIDEAPEENGPAILRLTKLLKFADQDRTWRRRGLLVMCRAHPE 361          
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7G2A3_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2A3_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 4.090e-48
Identity = 95/141 (67.38%), Postives = 110/141 (78.01%), Query Frame = 1
Query:    1 MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEG 423
            MP YEERASILQ  G  IF +VCDRATP+QWA+WLRAPLEHAAGTGN DLVDKLL AGA+  AGW+GCHGK+LLHA A+GG+  V+++L RAGA  DM  K+      PL LA +GGK AAAK L+MAGADVN LDA  +G
Sbjct:    1 MPGYEERASILQDLGDTIFKLVCDRATPEQWAEWLRAPLEHAAGTGNRDLVDKLLGAGANVGAGWRGCHGKTLLHAAAEGGNVHVITSLRRAGAGRDMKAKSLDTGHTPLDLAVIGGKEAAAKALIMAGADVNTLDATNDG 141          
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D8LHQ7_ECTSI (F-box domain and ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ7_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 2.450e-46
Identity = 91/141 (64.54%), Postives = 108/141 (76.60%), Query Frame = 1
Query:    1 MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEG 423
            +P YEER+SILQ  G   F +V DRATP QWA+WLRAPLEHAA TGN DLVDKLL AGA+G AGW+GCHGK+LLHA A+GG+ +V++ L  AGA EDM  KA      PL LA +GGK AAAK L+MAGA+VN+LDA  +G
Sbjct:   43 IPGYEERSSILQDLGDTTFKLVRDRATPDQWAEWLRAPLEHAAATGNRDLVDKLLGAGANGGAGWRGCHGKTLLHAAAEGGNVQVITRLRNAGAGEDMKAKALDTGHTPLDLAVIGGKEAAAKALIMAGANVNMLDATNDG 183          
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7FQP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP1_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 3.200e-41
Identity = 86/137 (62.77%), Postives = 105/137 (76.64%), Query Frame = 1
Query:   13 EERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHS-KRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGE 420
            E+RA  L     +IF ++CDRAT +QWA+WLRAPLEHAAGT N DLV+KLLKAGADGSAGW+GC  K+LLHA A+GG+E VV+AL+RAGA EDM+ K        PLH+A   GK AAA+VLM+AGADVN  D +G+
Sbjct:    9 EDRAKTLGDAAGIIFKLMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGADGSAGWRGCDDKTLLHAAAEGGNEEVVTALVRAGAGEDMEAKVLGIVGGTPLHVAVATGKDAAARVLMLAGADVNAADRNGD 145          
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7FQP2_ECTSI (Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQP2_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 9.860e-38
Identity = 78/132 (59.09%), Postives = 96/132 (72.73%), Query Frame = 1
Query:   13 EERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILD 408
            E+R  IL     MIF ++CDRAT +QW +WLRAPLEHAAGT N DLV+KLLKAGADGSAGW+GC   +LLHA        VV+AL+RAGA EDM+ K       PLH+A + G+ AAA+VL++AGADVN +D
Sbjct:    9 EDRVKILGDAADMIFKLMCDRATSEQWTEWLRAPLEHAAGTANRDLVEKLLKAGADGSAGWRGCDDNTLLHAAXXXXXXXVVTALIRAGAGEDMEAKTPGTGGTPLHVAVMRGQEAAARVLVLAGADVNAVD 140          
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: A0A6H5JXY4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXY4_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 9.060e-37
Identity = 82/138 (59.42%), Postives = 105/138 (76.09%), Query Frame = 1
Query:   13 EERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGG-DERVVSALMRAGAKEDMDTKAHSK-RRAPLHLAALGGKAAAAKVLMMAGADVNILDADGE 420
            E+RA IL     MIF ++CDRAT +QWA+WLRAPLEHAAGT N DLV+KLLKAGA+GSAG +GC   +LLHA A+GG +E VV+AL++AGA+ED++ K     R  PLH+A   GK AAA+ +M+AGADVN  D +G+
Sbjct:   11 EDRAKILGDAADMIFELMCDRATSEQWAEWLRAPLEHAAGTANQDLVEKLLKAGANGSAGRRGCDDNTLLHAAAEGGNEEEVVTALIKAGAEEDIEAKVVGMVRGTPLHVAVATGKEAAARAMMLAGADVNAADRNGD 148          
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D8LH19_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH19_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 7.920e-32
Identity = 71/136 (52.21%), Postives = 91/136 (66.91%), Query Frame = 1
Query:    1 MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILD 408
            M  ++ER + L G    +F +V   ATP QWA+WLRAPLEHA   GN  L   LL+AGADG AGWKGC G+SLL    +GG+ + VSAL+ AG+  D++    S RR+PLH A  GG  A A+VLM+AGA V++LD
Sbjct:    1 MANFDERTAALGGTEEQLFKLVSRHATPAQWAEWLRAPLEHAVAEGNQHLASTLLRAGADGGAGWKGCDGRSLLDVAVQGGNSKTVSALLEAGSLGDVNAVTGSDRRSPLHRAIAGGHTAVARVLMLAGAGVSLLD 136          
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7FPN3_ECTSI (Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 1.380e-31
Identity = 67/107 (62.62%), Postives = 82/107 (76.64%), Query Frame = 1
Query:    7 QYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAP 327
            +YE+RA+IL+G     F +VCDRATP+QWA+WLRAPLEHAA T + DLV KLL AGA+GS GW GC GK+LLHA A+GG+ +V+ AL+RAGA  D DT A  K R P
Sbjct:    6 RYEDRANILRGSEDTTFRLVCDRATPEQWAEWLRAPLEHAAATADHDLVKKLLNAGANGSTGWVGCDGKTLLHAAAEGGNAQVIMALLRAGAAGDKDTAASYKERTP 112          
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: A0A6H5KB54_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB54_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.130e-30
Identity = 192/389 (49.36%), Postives = 208/389 (53.47%), Query Frame = 1
Query:  133 TGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTVSSPLHIGCQEGELDAADLLLRWGADETALDKKARTPSARMPDIATAVAEDRPKLERLSKLLACAAQDRAWRRRSMLVLCRAHPDRLRLAIEIPDTA-ELSG---QPQGRPRRRARR-DQVKVEVTMGGA 1284
            T N +LV KLL+AGADG  GW+GCH K+LLHA AKGGD  VVS L RAGA+ D + +A      PLHLA LGG AA AK L MA ADVN+LDA   GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                        XXXXXXXXXXXXXXXXXXXXXXXXXX                               ETA+D +  TPS  +P IA A  ED  +LERLSKLL  A QDRAWRRR  L LCRAHPDRLRL +EIP TA E SG   Q Q RP RRAR+  Q KV+V +  A
Sbjct:   21 TANNELVSKLLRAGADGGVGWRGCHDKTLLHAAAKGGDALVVSLLQRAGARADFEAEAPGTGHTPLHLAVLGGNAATAKALTMAEADVNVLDAMNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDIVVALAHKGVDLEGVAEPPLLRAVRQDHISTVRVLLAVGANANNPFSDYDYGTTVLHFAAETDNAVAIPVLIEAGASVQSSDMYDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKETAVDLQGSTPSEFIPAIAEAADEDHRRLERLSKLLTRAPQDRAWRRRGFLALCRAHPDRLRLVVEIPKTADEASGKQPQEQERPSRRARKGQQSKVDVEVDDA 409          
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Match: D7G292_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G292_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.120e-30
Identity = 192/369 (52.03%), Postives = 214/369 (57.99%), Query Frame = 1
Query:  133 TGNADLVDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDTKAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSNTVSSPLHIGCQEGELDAADLLLRWGADETALDKKARTP-SARMPDIATAVAEDRPKLERLSKLLACAAQDRAWRRRSMLVLCRAHPDRLRLAIEIP-DTAELSGQPQGRPR 1233
            TGN DLVDKLL AGA+G AGW+GC GK+LLHA A+GG+  V++ L RAGA  DM  K       PL LA +GGKAAAA+ L+MAGADVN+LD+  +GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                  XXXXXXXXXXXXXXXXXXXXXX                                C     DAADLLLRWGADETA++ +  T  S  +  IA A+    P LER+SKLLA A QDRAWRRR  LVLCRAH DR+RLA+EIP   AE +  PQ RPR
Sbjct:   48 TGNRDLVDKLLGAGANGGAGWRGCDGKTLLHAAAEGGNVPVIARLRRAGAGGDMKAKTLDTGHTPLDLAVVGGKAAAAEALIMAGADVNVLDSKNDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEKGIDLNCLNYKRGTPLHVAKIRSAPEQRAAIRALFEAGADIEGPGIRGRTPLRHAARSGSYAAIXXXXXXXXXXXXXXXXXXXXXXC------------------------------ACFFCHHDAADLLLRWGADETAVNLEGETVVSMVIRRIAEALETRCPPLERVSKLLARAPQDRAWRRRGFLVLCRAHRDRVRLAVEIPVAAAEATEGPQQRPR 386          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16.4138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM65_ECTSI1.280e-5052.58Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ecto... [more]
D7G2A3_ECTSI4.090e-4867.38Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D8LHQ7_ECTSI2.450e-4664.54F-box domain and ankyrin repeat protein n=1 Tax=Ec... [more]
D7FQP1_ECTSI3.200e-4162.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQP2_ECTSI9.860e-3859.09Pc16g06120 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5JXY4_9PHAE9.060e-3759.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH19_ECTSI7.920e-3252.21Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7FPN3_ECTSI1.380e-3162.62Similar to ankyrin 2,3/unc44, partial n=2 Tax=Ecto... [more]
A0A6H5KB54_9PHAE1.130e-3049.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G292_ECTSI2.120e-3052.03Ankyrin repeat domain protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16contigL-elsbetiae_contig16:66627..68761 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score191.4
Seed ortholog evalue9.3e-46
Seed eggNOG ortholog2880.D7FM65
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size1795
Cds size1398
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16.4138.1prot_L-elsbetiae_contig16.4138.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig16 67364..68761 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815659.6585176-UTR-L-elsbetiae_contig16:66626..669641622815659.6585176-UTR-L-elsbetiae_contig16:66626..66964Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig16 66627..66964 -
1691683020.4867558-UTR-L-elsbetiae_contig16:66626..669641691683020.4867558-UTR-L-elsbetiae_contig16:66626..66964Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig16 66627..66964 -
1622815659.6723297-UTR-L-elsbetiae_contig16:67304..673631622815659.6723297-UTR-L-elsbetiae_contig16:67304..67363Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig16 67305..67363 -
1691683020.5016975-UTR-L-elsbetiae_contig16:67304..673631691683020.5016975-UTR-L-elsbetiae_contig16:67304..67363Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig16 67305..67363 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815659.6847234-CDS-L-elsbetiae_contig16:67363..687611622815659.6847234-CDS-L-elsbetiae_contig16:67363..68761Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 67364..68761 -
1691683020.5098798-CDS-L-elsbetiae_contig16:67363..687611691683020.5098798-CDS-L-elsbetiae_contig16:67363..68761Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig16 67364..68761 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig16.4138.1

>prot_L-elsbetiae_contig16.4138.1 ID=prot_L-elsbetiae_contig16.4138.1|Name=mRNA_L-elsbetiae_contig16.4138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=466bp
MPQYEERASILQGEGAMIFNMVCDRATPKQWAKWLRAPLEHAAGTGNADL
VDKLLKAGADGSAGWKGCHGKSLLHAGAKGGDERVVSALMRAGAKEDMDT
KAHSKRRAPLHLAALGGKAAAAKVLMMAGADVNILDADGEGPLHLAIKGG
HAGVAKDLLLRGADPEVKLPNGHFPIHLAADRGHDEIVRNLLHRGAQMDR
LTDSGWTPLYHAVRSNQLSTVKVLLGGGANTTLLCNGHTALDQAVVRNNT
DALAALVEAGADIQARSNGGFTPLHWSALFGSCAAMLALLRLGANVHAKT
SNTVSSPLHIGCQEGELDAADLLLRWGADETALDKKARTPSARMPDIATA
VAEDRPKLERLSKLLACAAQDRAWRRRSMLVLCRAHPDRLRLAIEIPDTA
ELSGQPQGRPRRRARRDQVKVEVTMGGARNGGAGSSAGGGKRGASEGSGG
GGGGGGFEWRPGSWR*
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mRNA from alignment at L-elsbetiae_contig16:66627..68761-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig16.4138.1 ID=mRNA_L-elsbetiae_contig16.4138.1|Name=mRNA_L-elsbetiae_contig16.4138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2135bp|location=Sequence derived from alignment at L-elsbetiae_contig16:66627..68761- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCACAGTACGAGGAACGTGCCAGCATTCTGCAGGGCGAAGGTGCTAT GATTTTCAACATGGTGTGCGATCGGGCGACACCGAAGCAGTGGGCGAAGT GGCTTCGGGCCCCGCTCGAGCACGCGGCAGGCACGGGAAACGCCGACCTG GTGGACAAGCTGCTGAAAGCCGGGGCGGACGGGAGTGCGGGGTGGAAGGG GTGCCATGGCAAGAGCCTGCTGCACGCGGGCGCTAAAGGAGGAGACGAGC GAGTGGTATCGGCACTGATGAGGGCGGGGGCCAAAGAAGACATGGACACG AAAGCCCACTCGAAGAGGCGCGCACCCCTCCATCTTGCCGCACTCGGTGG GAAGGCGGCTGCTGCAAAGGTGCTGATGATGGCTGGGGCGGATGTGAACA TTCTCGACGCAGACGGTGAGGGTCCGCTTCACCTCGCCATCAAAGGGGGT CACGCGGGCGTTGCTAAGGATTTGCTACTCCGTGGAGCCGACCCCGAGGT AAAGCTCCCGAACGGTCACTTCCCCATTCACCTCGCTGCCGACCGTGGCC ATGATGAGATAGTGCGCAATTTGCTGCACAGGGGAGCACAGATGGACCGC TTGACTGACAGTGGGTGGACTCCCCTCTATCACGCCGTTCGCTCAAACCA GCTCTCGACCGTGAAGGTTCTCTTGGGCGGGGGGGCTAACACGACCCTTC TGTGCAACGGTCACACCGCGCTGGACCAAGCCGTCGTAAGGAACAACACG GACGCCCTAGCAGCGCTCGTGGAGGCTGGGGCCGACATCCAAGCAAGGAG CAACGGAGGGTTTACACCGCTCCACTGGTCGGCTTTGTTTGGCTCATGCG CAGCCATGCTTGCTCTCTTGCGACTGGGGGCGAACGTGCATGCCAAAACC TCCAATACCGTATCTAGCCCGTTGCACATTGGTTGCCAAGAAGGAGAGCT TGATGCCGCGGATCTGTTGTTGAGGTGGGGGGCCGATGAGACCGCCCTTG ACAAGAAGGCGAGAACACCCAGCGCCAGGATGCCGGACATTGCCACAGCT GTCGCGGAAGATCGTCCAAAACTCGAACGTCTGTCCAAGCTGCTGGCGTG TGCTGCGCAGGACAGGGCCTGGCGTCGTCGCAGCATGCTGGTCTTGTGCC GCGCCCACCCAGACAGGCTACGGCTGGCGATAGAGATTCCCGATACCGCT GAGTTGAGCGGGCAGCCGCAAGGCCGTCCGAGGCGTCGTGCTAGGAGGGA TCAGGTGAAGGTCGAGGTCACGATGGGCGGCGCGCGAAATGGAGGGGCGG GGAGTAGCGCGGGCGGCGGCAAGAGGGGTGCAAGCGAGGGATCGGGCGGT GGCGGCGGCGGTGGAGGGTTCGAGTGGCGGCCTGGCTCATGGCGCTGACG GATGAGAACGTGTTCCGCAAGATCGTGGGATTCCTGTGACATGGAGTCAA GATGAGAGTAACAAGTTTTTTTTTATCAACTTGAGATCTTAAGGTGGGTG AGTTGTACGATACCTCTTCGCATTCGTGGTACTTACCTGGCGTGTGACTG CGCTGTCGTGAGATTTTTGTTTTTCGCTTCACTTTTCAACCAATAGTGTC GTTACTCTCTCTCTCTCTCTCTCTCTCTCGTAGATTATTCGTCCGTGTGT GTCTTCGAAAAATGTGAAGAGCAGCATGGCATACGTGCAAACAAAGGTAC CTGCTGTCACCAGCAAGCTGATGATGGATACATGAACCCTCTCCCGCTGC TCTGCCCGCTGCCCCTTCTCTGCCTTGTGTGATTAAAAGCCTGCGAGCGG TTGCTGCTGGTCTGGCTTACGGGAGCCGGTGGTCGTACGTGGAAGACTTC GGAACAGAATCTTCAGTTGAAATTTCTTCGGCACGAGTGGTGCACACCCC ATGTATTGGGGAGTGCTGCCAATTTTCGGGCGGTAGATCTAGCTGTCCTG CCCTCTGTTGCCGTTGAGTACAGAGATGATGTCATATTTGCTGAGATTGG TCGTCGAGTCGCGAAAAGCTCTGAATTCTTCGATGGAACGAACCATGGTT CAACGTTTCAACGTATTGGCGGCCGATGCTTTTTGAGTTCGGCAGGTGGC GCAGCGTGCTGCGGCAGTAGAACGGAGGCCACAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig16:66627..68761-

>mRNA_L-elsbetiae_contig16.4138.1 ID=mRNA_L-elsbetiae_contig16.4138.1|Name=mRNA_L-elsbetiae_contig16.4138.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2796bp|location=Sequence derived from alignment at L-elsbetiae_contig16:66627..68761- (Laminarionema elsbetiae ELsaHSoW15)
ATGCCACAGTACGAGGAACGTGCCAGCATTCTGCAGGGCGAAGGTGCTAT
GATTTTCAACATGGTGTGCGATCGGGCGACACCGAAGCAGTGGGCGAAGT
GGCTTCGGGCCCCGCTCGAGCACGCGGCAGGCACGGGAAACGCCGACCTG
GTGGACAAGCTGCTGAAAGCCGGGGCGGACGGGAGTGCGGGGTGGAAGGG
GTGCCATGGCAAGAGCCTGCTGCACGCGGGCGCTAAAGGAGGAGACGAGC
GAGTGGTATCGGCACTGATGAGGGCGGGGGCCAAAGAAGACATGGACACG
AAAGCCCACTCGAAGAGGCGCGCACCCCTCCATCTTGCCGCACTCGGTGG
GAAGGCGGCTGCTGCAAAGGTGCTGATGATGGCTGGGGCGGATGTGAACA
TTCTCGACGCAGACGGTGAGGGTCCGCTTCACCTCGCCATCAAAGGGGGT
CACGCGGGCGTTGCTAAGGATTTGCTACTCCGTGGAGCCGACCCCGAGGT
AAAGCTCCCGAACGGTCACTTCCCCATTCACCTCGCTGCCGACCGTGGCC
ATGATGAGATAGTGCGCAATTTGCTGCACAGGGGAGCACAGATGGACCGC
TTGACTGACAGTGGGTGGACTCCCCTCTATCACGCCGTTCGCTCAAACCA
GCTCTCGACCGTGAAGGTTCTCTTGGGCGGGGGGGCTAACACGACCCTTC
TGTGCAACGGTCACACCGCGCTGGACCAAGCCGTCGTAAGGAACAACACG
GACGCCCTAGCAGCGCTCGTGGAGGCTGGGGCCGACATCCAAGCAAGGAG
CAACGGAGGGTTTACACCGCTCCACTGGTCGGCTTTGTTTGGCTCATGCG
CAGCCATGCTTGCTCTCTTGCGACTGGGGGCGAACGTGCATGCCAAAACC
TCCAATACCGTATCTAGCCCGTTGCACATTGGTTGCCAAGAAGGAGAGCT
TGATGCCGCGGATCTGTTGTTGAGGTGGGGGGCCGATGAGACCGCCCTTG
ACAAGAAGGCGAGAACACCCAGCGCCAGGATGCCGGACATTGCCACAGCT
GTCGCGGAAGATCGTCCAAAACTCGAACGTCTGTCCAAGCTGCTGGCGTG
TGCTGCGCAGGACAGGGCCTGGCGTCGTCGCAGCATGCTGGTCTTGTGCC
GCGCCCACCCAGACAGGCTACGGCTGGCGATAGAGATTCCCGATACCGCT
GAGTTGAGCGGGCAGCCGCAAGGCCGTCCGAGGCGTCGTGCTAGGAGGGA
TCAGGTGAAGGTCGAGGTCACGATGGGCGGCGCGCGAAATGGAGGGGCGG
GGAGTAGCGCGGGCGGCGGCAAGAGGGGTGCAAGCGAGGGATCGGGCGGT
GGCGGCGGCGGTGGAGGGTTCGAGTGGCGGCCTGGCTCATGGCGCTGAAT
GCCACAGTACGAGGAACGTGCCAGCATTCTGCAGGGCGAAGGTGCTATGA
TTTTCAACATGGTGTGCGATCGGGCGACACCGAAGCAGTGGGCGAAGTGG
CTTCGGGCCCCGCTCGAGCACGCGGCAGGCACGGGAAACGCCGACCTGGT
GGACAAGCTGCTGAAAGCCGGGGCGGACGGGAGTGCGGGGTGGAAGGGGT
GCCATGGCAAGAGCCTGCTGCACGCGGGCGCTAAAGGAGGAGACGAGCGA
GTGGTATCGGCACTGATGAGGGCGGGGGCCAAAGAAGACATGGACACGAA
AGCCCACTCGAAGAGGCGCGCACCCCTCCATCTTGCCGCACTCGGTGGGA
AGGCGGCTGCTGCAAAGGTGCTGATGATGGCTGGGGCGGATGTGAACATT
CTCGACGCAGACGGTGAGGGTCCGCTTCACCTCGCCATCAAAGGGGGTCA
CGCGGGCGTTGCTAAGGATTTGCTACTCCGTGGAGCCGACCCCGAGGTAA
AGCTCCCGAACGGTCACTTCCCCATTCACCTCGCTGCCGACCGTGGCCAT
GATGAGATAGTGCGCAATTTGCTGCACAGGGGAGCACAGATGGACCGCTT
GACTGACAGTGGGTGGACTCCCCTCTATCACGCCGTTCGCTCAAACCAGC
TCTCGACCGTGAAGGTTCTCTTGGGCGGGGGGGCTAACACGACCCTTCTG
TGCAACGGTCACACCGCGCTGGACCAAGCCGTCGTAAGGAACAACACGGA
CGCCCTAGCAGCGCTCGTGGAGGCTGGGGCCGACATCCAAGCAAGGAGCA
ACGGAGGGTTTACACCGCTCCACTGGTCGGCTTTGTTTGGCTCATGCGCA
GCCATGCTTGCTCTCTTGCGACTGGGGGCGAACGTGCATGCCAAAACCTC
CAATACCGTATCTAGCCCGTTGCACATTGGTTGCCAAGAAGGAGAGCTTG
ATGCCGCGGATCTGTTGTTGAGGTGGGGGGCCGATGAGACCGCCCTTGAC
AAGAAGGCGAGAACACCCAGCGCCAGGATGCCGGACATTGCCACAGCTGT
CGCGGAAGATCGTCCAAAACTCGAACGTCTGTCCAAGCTGCTGGCGTGTG
CTGCGCAGGACAGGGCCTGGCGTCGTCGCAGCATGCTGGTCTTGTGCCGC
GCCCACCCAGACAGGCTACGGCTGGCGATAGAGATTCCCGATACCGCTGA
GTTGAGCGGGCAGCCGCAAGGCCGTCCGAGGCGTCGTGCTAGGAGGGATC
AGGTGAAGGTCGAGGTCACGATGGGCGGCGCGCGAAATGGAGGGGCGGGG
AGTAGCGCGGGCGGCGGCAAGAGGGGTGCAAGCGAGGGATCGGGCGGTGG
CGGCGGCGGTGGAGGGTTCGAGTGGCGGCCTGGCTCATGGCGCTGA
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