mRNA_L-elsbetiae_contig15985.4123.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: D7G782_ECTSI (Globin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G782_ECTSI) HSP 1 Score: 153 bits (386), Expect = 8.970e-41 Identity = 75/98 (76.53%), Postives = 85/98 (86.73%), Query Frame = 3 Query: 186 LFKNTDMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAAKEVQ 479 LFK+TDMDKQGEKLMKTLGVAVAML+KMD L PIL +LG+KHV YGVT +MY SV ALL+T +KGLGEECTPLT AWTWV G+ISS+CIAAA EV+ Sbjct: 56 LFKDTDMDKQGEKLMKTLGVAVAMLNKMDTLKPILENLGRKHVDYGVTPEMYPSVGKALLITFEKGLGEECTPLTTKAWTWVFGIISSICIAAASEVK 153
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: D7FYD1_ECTSI (GLOBIN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD1_ECTSI) HSP 1 Score: 134 bits (338), Expect = 1.350e-33 Identity = 66/96 (68.75%), Postives = 80/96 (83.33%), Query Frame = 3 Query: 186 LFKNTDMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAAKE 473 LFK+ DM+KQG KLMK +GVAV MLDKMD+ P+L LGKKHV+YGVT+DMY SV +ALL+TL+KGLGEEC LTK AW WV+ I++VCIAAA+E Sbjct: 48 LFKDVDMEKQGAKLMKVIGVAVMMLDKMDQFKPMLVKLGKKHVTYGVTDDMYPSVVSALLITLEKGLGEECHQLTKDAWAWVMNSIAAVCIAAARE 143
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: A0A7Y4U0B6_9DELT (Hemin receptor n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4U0B6_9DELT) HSP 1 Score: 97.4 bits (241), Expect = 1.800e-20 Identity = 48/89 (53.93%), Postives = 65/89 (73.03%), Query Frame = 3 Query: 201 DMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAA 467 DM++QG++LM+ +G AV LD ++ +VP+LRSLGK+HV YGV + Y +V TALL TL +GLGE TP K AWT V GV++ V + AA Sbjct: 45 DMEEQGKRLMEMIGTAVQKLDNLETVVPVLRSLGKRHVRYGVKEEHYQTVGTALLTTLAQGLGEHFTPQVKEAWTLVYGVMADVMMKAA 133
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: A0A1I5J3T1_9HYPH (Nitric oxide dioxygenase n=1 Tax=Mesorhizobium sp. NFR06 TaxID=1566290 RepID=A0A1I5J3T1_9HYPH) HSP 1 Score: 94.0 bits (232), Expect = 3.480e-19 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 183 ALFKNTDMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAAKEVQ 479 ALF+ TD+ KQG KLM LG V L + + ++P ++ L ++HV YGV YA+V AL+ TLD GLGE TP + AWT G+++ V IAAA+EVQ Sbjct: 40 ALFRETDIKKQGAKLMAALGFVVHGLSRAETILPTVQDLARRHVGYGVEEQHYATVGQALIETLDTGLGEAFTPPVREAWTAAYGLLAGVMIAAAREVQ 138
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: A7IIA0_XANP2 (Globin n=3 Tax=Xanthobacter TaxID=279 RepID=A7IIA0_XANP2) HSP 1 Score: 93.6 bits (231), Expect = 4.650e-19 Identity = 52/95 (54.74%), Postives = 65/95 (68.42%), Query Frame = 3 Query: 186 LFKNTDMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAAK 470 LFK DM QG+KLM TLGV VA L + R+VP ++L +KHV YGV + YA V ALL TL++GLG + TP KAAW G++SSV IAAA+ Sbjct: 41 LFKG-DMTTQGQKLMATLGVVVAGLKDLPRIVPAAQNLARKHVGYGVKTEHYAPVGAALLWTLEQGLGADFTPEVKAAWADAYGLLSSVMIAAAE 134
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: A0A3S3IES6_9HYPH (Hemin receptor n=2 Tax=Mesorhizobium sp. TaxID=1871066 RepID=A0A3S3IES6_9HYPH) HSP 1 Score: 93.2 bits (230), Expect = 6.550e-19 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 3 Query: 183 ALFKNTDMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAAKEVQ 479 ALF+ TDM KQG KLM LG V L + + ++P ++ L ++HV YGV YA+V AL+ TL+ GLGE T + AWT G+++SV IAAAKE+Q Sbjct: 40 ALFRETDMKKQGAKLMAALGFVVHGLSRAETILPTVQDLARRHVGYGVEEHHYATVGQALIQTLEAGLGEAFTQEARVAWTAAYGLLASVMIAAAKEMQ 138
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: A0A848JY77_9HYPH (Nitric oxide dioxygenase n=9 Tax=Xanthobacter TaxID=279 RepID=A0A848JY77_9HYPH) HSP 1 Score: 92.4 bits (228), Expect = 1.300e-18 Identity = 49/96 (51.04%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 186 LFKNTDMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAAKE 473 LFK DM QG KLM TLG+ VA L+ + ++VP SL +KHV+YGV ++ YA V AL+ TL++G+G + TP TK AW G++SSV IAA+ E Sbjct: 43 LFKG-DMSLQGAKLMATLGLVVAGLNDLSKIVPAAESLARKHVAYGVKDEHYAPVGAALIWTLERGIGPDFTPETKDAWVEAYGILSSVMIAASAE 137
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: UPI0019330743 (globin domain-containing protein n=1 Tax=Xanthobacter dioxanivorans TaxID=2528964 RepID=UPI0019330743) HSP 1 Score: 92.0 bits (227), Expect = 1.640e-18 Identity = 51/95 (53.68%), Postives = 64/95 (67.37%), Query Frame = 3 Query: 186 LFKNTDMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAAK 470 LFK DM QG KLM TLGV VA L + ++VP +L +KHV YGV + YA V ALL TL++GLG + TP KAAWT G++SSV I+AA+ Sbjct: 41 LFKG-DMSVQGAKLMSTLGVVVAGLKDLPKVVPAAEALARKHVDYGVKTEHYAPVGAALLWTLEQGLGADFTPEVKAAWTEAYGLLSSVMISAAE 134
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: A0A1P8KCF8_9BURK (Hemin receptor n=1 Tax=Rhodoferax saidenbachensis TaxID=1484693 RepID=A0A1P8KCF8_9BURK) HSP 1 Score: 91.3 bits (225), Expect = 3.920e-18 Identity = 52/105 (49.52%), Postives = 66/105 (62.86%), Query Frame = 3 Query: 186 LFKNTDMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAAKEVQA*SRASS 500 LFK+ DM KQG LM LG AV L +D L P+LR+LG +HV YGV ++ Y +V TALL TLD+GLG + TP + AWT G+++ V A EVQ R S Sbjct: 41 LFKS-DMSKQGTMLMSMLGSAVKGLSDLDALAPVLRNLGARHVDYGVKDEHYVTVGTALLWTLDQGLGPKFTPEVREAWTAAYGLLADVMQFGALEVQRIKRHES 144
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Match: A0A1W9I7F3_9PROT (Hemin receptor n=1 Tax=Proteobacteria bacterium SG_bin9 TaxID=1827385 RepID=A0A1W9I7F3_9PROT) HSP 1 Score: 90.9 bits (224), Expect = 4.350e-18 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 3 Query: 180 QALFKNTDMDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSTALLMTLDKGLGEECTPLTKAAWTWVLGVISSVCIAAAK 470 Q LFK TDM +Q +KLM+ +G VA LD + L+P+L LGKKHV+YGVT+ Y +V ALL TL++GLG+ TP K AW ++ V AAK Sbjct: 39 QPLFKATDMPEQRKKLMQAIGTVVAGLDNLAPLIPVLEGLGKKHVTYGVTDKQYDTVGAALLWTLEQGLGDAWTPPAKDAWVAAYTAVAGVMRNAAK 135 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15985.4123.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15985.4123.1 >prot_L-elsbetiae_contig15985.4123.1 ID=prot_L-elsbetiae_contig15985.4123.1|Name=mRNA_L-elsbetiae_contig15985.4123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp MDKQGEKLMKTLGVAVAMLDKMDRLVPILRSLGKKHVSYGVTNDMYASVSback to top mRNA from alignment at L-elsbetiae_contig15985:60..3728- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15985.4123.1 ID=mRNA_L-elsbetiae_contig15985.4123.1|Name=mRNA_L-elsbetiae_contig15985.4123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3669bp|location=Sequence derived from alignment at L-elsbetiae_contig15985:60..3728- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15985:60..3728- >mRNA_L-elsbetiae_contig15985.4123.1 ID=mRNA_L-elsbetiae_contig15985.4123.1|Name=mRNA_L-elsbetiae_contig15985.4123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=564bp|location=Sequence derived from alignment at L-elsbetiae_contig15985:60..3728- (Laminarionema elsbetiae ELsaHSoW15)back to top |