mRNA_L-elsbetiae_contig1598.4122.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1598.4122.1
Unique NamemRNA_L-elsbetiae_contig1598.4122.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: A0A6H5JN78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN78_9PHAE)

HSP 1 Score: 627 bits (1617), Expect = 5.320e-221
Identity = 366/460 (79.57%), Postives = 388/460 (84.35%), Query Frame = 1
Query:    7 EEHYQEEDRSAAKTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQGTTVCGSCVRLSWGKSGRADRDRXXXRAG-EPL-GMGGMXVXXXXXXXXXXXXXXXXXRGAQYSGLYGHPQSYASYNGGAYPANMFPAGAVYGGAAFPQPGQQQXXXXXXAGLAPPATTGTGQ-LPQQQQHQQAAVAXXXXXXXXXXXXXXXYAPQPYSQSYA----------PYQGFGFQQYPAQQQAAYTSFTGTNAPYA 1347
            ++ YQ+E+RSAAKTLWLGDVQP+WTEEYVESLFS I G+ELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLD+LNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDA+LK TF +K Y+SVLGAKVVTNPMTGSSKSFGFIRFGDEQERD+ALT+MNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSV EKVLR+TF+S GEI TVTTPPGRGCAFVTFAHRASAEHVINN+QGTTVCGSCVRLSWGKSGRADRDR   RAG +P+ GMGG+      XXXXXXXXX    RGA +SGLYGHPQSYAS+NG AYPAN+FPAGAVYGGA +PQPGQQQ       GL PPA  GTGQ LPQ          XXXXXXXXXXXXXXX                     PYQGFGFQQYPAQQQAAYTSF G NA YA
Sbjct:    4 DQQYQDENRSAAKTLWLGDVQPDWTEEYVESLFSGIVGKELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLDK-YASVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRETFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAGGDPIMGMGGIQSSPTAXXXXXXXXXA---RGAPFSGLYGHPQSYASFNG-AYPANIFPAGAVYGGA-YPQPGQQQP------GLPPPAAAGTGQQLPQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPYQGFGFQQYPAQQQAAYTSFNGNNAAYA 451          
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: D7FKJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKJ7_ECTSI)

HSP 1 Score: 562 bits (1448), Expect = 3.940e-197
Identity = 303/359 (84.40%), Postives = 322/359 (89.69%), Query Frame = 1
Query:    7 EEHYQEEDRSAAKTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQGTTVCGSCVRLSWGKSGRADRDRXXXRAG-EPL-GMGGMXVXXXXXXXXXXXXXXXXXRGAQYSGLYGHPQSYASYNGGAYP-----ANMFPAGAVYGGAA 1062
            ++ YQ+E+RSAAKTLWLGDVQP+WTEEYVESLFSSI GQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLD+LNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDA+LK TF  K Y+SVLGAKVVTNPMTGSSKSFGFIRFGDEQERD+ALT+MNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSV EKVLRDTF+S GEI TVTTPPGRGCAFVTFAHRASAEHVINN+QGTTVCGSCVRLSWGKSGRADRDR   RAG +P+ GMGG+      XXXXXXXXX    RGA +SGLYGHPQSYAS+NG AYP     AN     ++ GGAA
Sbjct:    4 DQQYQDENRSAAKTLWLGDVQPDWTEEYVESLFSSIVGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDSLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGK-YTSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDEALTAMNGAECCGRPIRVAPATKRTSVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRASAEHVINNMQGTTVCGSCVRLSWGKSGRADRDRERERAGGDPIMGMGGIQSSPTAXXXXXXXXXA---RGAPFSGLYGHPQSYASFNG-AYPDPSALANDLSQLSLSGGAA 357          
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: W7TLC3_9STRA (Nuclear acid binding protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLC3_9STRA)

HSP 1 Score: 280 bits (715), Expect = 1.510e-84
Identity = 170/359 (47.35%), Postives = 213/359 (59.33%), Query Frame = 1
Query:   43 KTLWLGDVQPEWTEEYVESLFSSIA---GQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTSVQGQ---------TGAHAT----------------DPSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQGTTVCGSCVRLSWGKSGRADRDRXXXRAGEPLGMGGMXVXXXXXXXXXXXXXXXXXRGAQYSGLYGHPQSYASYNGGAYPANMFP 1035
            KTLW+GD+QP W E YV S+F++     G  +EVKLIRD+H G  AGYGF++F   E A+ VL+T NG  I GT  R+RLNWGAGGKR+E APE+S+FVGDL+PEVTD  L+  F  K + S LGAKVV +P++G SK FGF+RF +E+E+++AL++M G  C GR IRVAPAT + +              G HA+                DP NTTVFVGGI+  V E VLR+ FS  G+I  V  PPGRGC FV + +R SAE  I  +QG  V G  VRLSWG+S  A       RA E   MGGM  XXXXX                  G+ G+P  YA+   GA     +P
Sbjct:    9 KTLWVGDIQPSWDEAYVGSVFANTGLEEGDVVEVKLIRDKHTGFPAGYGFVEFATAEIAEKVLETCNGNAIAGTHFRFRLNWGAGGKRMETAPEFSIFVGDLAPEVTDQMLQDIFLEK-FPSTLGAKVVMDPVSGMSKGFGFVRFKNEEEKEEALSTMTGVGCGGRAIRVAPATAKKAAGSHGLGMGAGMMMGMHASPYPGMHPHMMLGGDGEDPHNTTVFVGGIDAGVTEDVLREAFSGYGDIIYVKIPPGRGCGFVQYVNRTSAETAIAKMQGADVRGCKVRLSWGRSSPA-------RA-EGRRMGGMGXXXXXXM-----------------GMAGYPAMYATVGPGAGGGGYYP 341          
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: H3G796_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G796_PHYRM)

HSP 1 Score: 257 bits (657), Expect = 5.900e-80
Identity = 133/264 (50.38%), Postives = 178/264 (67.42%), Query Frame = 1
Query:   43 KTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTSVQGQT--GAHATDPSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQGTTVCGSCVRLSWGKS 828
            KTLW+GD+Q  W E ++ SLF+S A Q + VKLIRD+  G  AGYGF++F     AQ VL+T NG+ I  T  R+R+NWGAGG+RIE + ++S+FVGDL+P+V D  L  TF N  +SSV GAKVV +P+T  SK FGF+RFG ++E D AL +MNG  C  RP+RV+ AT+R   +     GA   + +NTTVFVGG++ S  E  LR  F + GEI +V  PPGRGC FV +  + +AE  I+ + GT +CG  VR +WG+S
Sbjct:    3 KTLWMGDIQMHWDEAFISSLFASAAEQPV-VKLIRDKVTGYPAGYGFLEFPTQLGAQQVLETFNGQLIPNTMHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVGDELLLSTF-NSRFSSVRGAKVVMDPVTRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKARQMPSFGAAEEEGANTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAISQMNGTVICGVKVRCAWGRS 264          
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: A0A484DTT9_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTT9_BRELC)

HSP 1 Score: 253 bits (645), Expect = 3.040e-76
Identity = 132/267 (49.44%), Postives = 179/267 (67.04%), Query Frame = 1
Query:   43 KTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTSVQGQT--GAHATDPSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQGTTVCGSCVRLSWGKSGRA 837
            KTLW+GD+Q  W E Y+ SLF+S + Q + VKLIRD+  G  AGYGF++F   + AQ +LDT NG+ I  T  R+R+NWGAGG+RIE + ++S+FVGDLSP+V+D  L  TF  + +S+V GAKVV +P+T  SK FGF+RFG ++E D AL +MNG  C  RP+RV+ AT+R   + Q        D +NTTVFVGG++ S  E+ LR  F + GEI +V  PPGRGC FV +  + +AE  I  + G+ V G  VR +WG+S  A
Sbjct:    6 KTLWMGDIQMHWDEAYIVSLFASASEQPV-VKLIRDKVTGYPAGYGFLEFPTQQGAQEILDTFNGQLIPNTLHRFRMNWGAGGRRIETSDDHSIFVGDLSPDVSDDLLLSTFSAR-FSTVRGAKVVMDPITRMSKGFGFVRFGSKEEADQALQTMNGVYCSSRPMRVSVATERNKARQQAVFSMGEEDGANTTVFVGGLDPSTTEEELRARFGALGEIVSVKVPPGRGCGFVQYTTKEAAEIAILQMNGSVVSGVKVRCAWGRSAAA 270          
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: A0A2D4BYT1_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BYT1_PYTIN)

HSP 1 Score: 253 bits (645), Expect = 5.500e-76
Identity = 132/271 (48.71%), Postives = 178/271 (65.68%), Query Frame = 1
Query:   43 KTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTS--------VQGQTGAHATDPSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQGTTVCGSCVRLSWGKSG 831
            KTLW+GD+QP+W E ++ SLF+S + Q + VKLIRD+  G  +GY F++F +   AQ VL+  NG+ +  T  R+R+NWGAGG+RIE   ++SVFVGDL+P+VTD  L  TF  + ++SV  AKVVT+P+T +SK FGF+RFG ++E D AL +MNG  C  RP+RV+ AT R           QG TG    D  NTTVF+GG++ S  E  LR  F+  GEI +V  PPGRGC FV +  + SAE  I+ L G  V G  +R +WG+SG
Sbjct:    6 KTLWMGDIQPQWDEAFIGSLFASCSEQPV-VKLIRDKVTGYPSGYCFLEFPSQRGAQXVLENFNGQAVPNTMHRFRMNWGAGGRRIETPEDHSVFVGDLAPDVTDXVLMNTFATR-FASVRSAKVVTDPITRTSKGFGFVRFGVKEEADQALQTMNGVYCSSRPMRVSVATDRNRNRNEYGGFPQGPTGVPDADAPNTTVFIGGLDASTAEDELRARFAPFGEITSVRIPPGRGCGFVHYVSKESAEMAISQLNGAVVGGVKIRCAWGRSG 274          
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: A0A0P1A6W8_PLAHL (Nuclear acid binding n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6W8_PLAHL)

HSP 1 Score: 251 bits (642), Expect = 8.270e-76
Identity = 130/267 (48.69%), Postives = 180/267 (67.42%), Query Frame = 1
Query:   43 KTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTSVQGQTGAHAT--DPSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQGTTVCGSCVRLSWGKSGRA 837
            KTLW+GD+Q  W E ++ SLF+S A Q + VKLIRD+  G  AGYGF++F     AQ VL+T NG+ I  T  R+R+NWGAGG+RIE + ++S+FVGDL+P+V D  L  TF  + +++V GAKVV +P+T  SK FGF+RFG ++E D AL +MNG  C  RP+RV+ AT+R   + Q G   +  D +NTTVFVGG++   +E+ LR  F + GEI +V  PPGRGC FV +  + +AE  I+ + G+ V G  VR +WG+S  A
Sbjct:    6 KTLWMGDIQMHWDETFIVSLFASAAEQPI-VKLIRDKVTGYPAGYGFLEFPTQRGAQQVLETFNGQLIPNTLHRFRMNWGAGGRRIETSDDHSIFVGDLAPDVADELLLSTFSAR-FTTVRGAKVVMDPITRMSKGFGFVRFGSKEEADQALQTMNGVFCSSRPMRVSVATERNKARQQLGFSMSEEDGANTTVFVGGLDPGTSEEELRTRFGALGEIVSVKVPPGRGCGFVQYTTKEAAEAAISQMNGSVVGGVKVRCAWGRSAAA 270          
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: A0A1W0AC95_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC95_9STRA)

HSP 1 Score: 246 bits (627), Expect = 1.860e-75
Identity = 132/251 (52.59%), Postives = 165/251 (65.74%), Query Frame = 1
Query:   43 KTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTS----VQGQTGAHATDPSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQG 783
            KTLW+GD+Q  W E +V +LFSS+ GQE  VKLIRD+  G   GYGFI+F   E AQ  L+TLNG+ I  T +R+RLNWGAGGKR+E A +YS+FVGDL+PEVTD  L   F  K Y+SV GAKVV + MT +SK FGF+RFG + E D AL  M+G  C  RP+RV+ AT R      ++        D SNTTVFVGG++ S++E  LR  FS+ GEI  V  PPGRGC FV +   A A+  I  + G
Sbjct:    5 KTLWMGDIQANWEEFFVRALFSSL-GQEPNVKLIRDKGTGCPVGYGFIEFETVEAAQTALETLNGQLIPNTPIRFRLNWGAGGKRLESAEDYSIFVGDLAPEVTDDALFAVFSAK-YASVRGAKVVIDQMTRTSKGFGFVRFGVKAEADQALEQMHGVPCLSRPMRVSTATDRIKPTPLMKLPPSPSPEDESNTTVFVGGLDPSISEDDLRKHFSTLGEIVNVKVPPGRGCGFVQYESHAIAQQAIQEMTG 253          
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: A0A3M6VIX5_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIX5_9STRA)

HSP 1 Score: 250 bits (639), Expect = 2.740e-75
Identity = 130/267 (48.69%), Postives = 176/267 (65.92%), Query Frame = 1
Query:   43 KTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTSVQGQTG--AHATDPSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQGTTVCGSCVRLSWGKSGRA 837
            KTLW+GD+Q  W E ++ SLF++   Q + +KLIRD+  G  AGYGF++F   + AQ VL+T NG+ I  T  R+R+NWGAGG+RIE   ++S+FVGDL+P+VTD  L  TF N  +SSV GAKVV +P+T  SK FGF+RFG + E D AL +MNG  C  RP+RV+ AT+R   + Q G      + +NTTVFVGG++    E+ LR  F   GEI ++  PPGRGC FV +  + +AE+ I  + GT V G  VR +WG+S  A
Sbjct:    6 KTLWMGDIQMHWDETFIASLFATAVEQPV-IKLIRDKVTGYPAGYGFLEFPTQQGAQQVLETYNGQLIPNTMHRFRMNWGAGGRRIESLEDHSIFVGDLAPDVTDELLLSTF-NARFSSVRGAKVVMDPVTRMSKGFGFVRFGGKNEADQALQTMNGVYCSSRPMRVSVATERNKARQQMGFTMGEEEGANTTVFVGGLDPLTTEEELRARFGVLGEIVSIKVPPGRGCGFVQYTSKEAAENAILQMNGTVVSGVKVRCAWGRSAAA 270          
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Match: K3W5A8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5A8_GLOUD)

HSP 1 Score: 249 bits (636), Expect = 7.660e-75
Identity = 132/271 (48.71%), Postives = 179/271 (66.05%), Query Frame = 1
Query:   43 KTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRDRHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRIEQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKSFGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTS-------VQGQTGAHATDP--SNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRASAEHVINNLQGTTVCGSCVRLSWGKS 828
            KTLW+GD+Q  W E ++ SLF++  G++  VKLIRD+  G  AGYGF++F     AQLVL+T NG+ I  T  R+R+NWGAGG+RIE   ++SVFVGDL+P+V+D  L  TF  + +SSV GAKVV +P+T  SK FGF+RFG+++E D AL +MNG  C  RP+RV+ AT R         V G  G   T+   +NTTVFVGG++ S  E+ LR  F + G+I +V  PPGRGC FV +  + +AE  I  + GT + G  VR +WG+S
Sbjct:    6 KTLWMGDIQMHWDEAFISSLFAA-TGEQPVVKLIRDKVTGYPAGYGFLEFPTQRGAQLVLETYNGQVIPNTLHRFRMNWGAGGRRIETGDDHSVFVGDLAPDVSDELLLTTFSTR-FSSVRGAKVVIDPVTRMSKGFGFVRFGNKEEADQALQTMNGVYCSSRPMRVSVATDRNGKPRSGNQVYGAGGMGNTEEEGANTTVFVGGLDPSTTEEELRARFGAIGDIVSVKVPPGRGCGFVQYTTKEAAEVAIGQMNGTVIGGVKVRCAWGRS 274          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1598.4122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN78_9PHAE5.320e-22179.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKJ7_ECTSI3.940e-19784.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TLC3_9STRA1.510e-8447.35Nuclear acid binding protein n=2 Tax=Monodopsidace... [more]
H3G796_PHYRM5.900e-8050.38Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A484DTT9_BRELC3.040e-7649.44Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A2D4BYT1_PYTIN5.500e-7648.71Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A0P1A6W8_PLAHL8.270e-7648.69Nuclear acid binding n=1 Tax=Plasmopara halstedii ... [more]
A0A1W0AC95_9STRA1.860e-7552.59Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A3M6VIX5_9STRA2.740e-7548.69Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
K3W5A8_GLOUD7.660e-7548.71Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1598contigL-elsbetiae_contig1598:20529..23569 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score562.8
Seed ortholog evalue1.5e-157
Seed eggNOG ortholog2880.D7FKJ7
Preferred nameTRNAU1AP
KEGG koko:K11274
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0000243,GO:0000245,GO:0000302,GO:0000375,GO:0000377,GO:0000398,GO:0000932,GO:0001101,GO:0001514,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005681,GO:0005684,GO:0005685,GO:0005737,GO:0005829,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006412,GO:0006414,GO:0006417,GO:0006451,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0008143,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009719,GO:0009725,GO:0009735,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0010033,GO:0010035,GO:0010193,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010610,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0031331,GO:0032268,GO:0032269,GO:0032991,GO:0033120,GO:0033554,GO:0034248,GO:0034249,GO:0034599,GO:0034605,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042221,GO:0042493,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043484,GO:0043487,GO:0043488,GO:0043489,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045934,GO:0045935,GO:0046483,GO:0046677,GO:0048024,GO:0048026,GO:0048255,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050684,GO:0050685,GO:0050779,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0061013,GO:0061014,GO:0061157,GO:0061158,GO:0065003,GO:0065007,GO:0065008,GO:0070717,GO:0070887,GO:0070935,GO:0071004,GO:0071010,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097525,GO:0120114,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1902369,GO:1902373,GO:1903311,GO:1903312,GO:1903313,GO:1990904,GO:2000112,GO:2000113,GO:2000815
EggNOG free text desc.RNA binding
EggNOG OGsKOG0118@1,KOG0118@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons5
Model size1347
Cds size1347
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1598.4122.1prot_L-elsbetiae_contig1598.4122.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1598 20529..23569 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815657.9330118-CDS-L-elsbetiae_contig1598:20528..205971622815657.9330118-CDS-L-elsbetiae_contig1598:20528..20597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 20529..20597 +
1691683019.3686926-CDS-L-elsbetiae_contig1598:20528..205971691683019.3686926-CDS-L-elsbetiae_contig1598:20528..20597Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 20529..20597 +
1622815657.9439883-CDS-L-elsbetiae_contig1598:20957..210031622815657.9439883-CDS-L-elsbetiae_contig1598:20957..21003Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 20958..21003 +
1691683019.3830194-CDS-L-elsbetiae_contig1598:20957..210031691683019.3830194-CDS-L-elsbetiae_contig1598:20957..21003Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 20958..21003 +
1622815657.9555948-CDS-L-elsbetiae_contig1598:21132..212641622815657.9555948-CDS-L-elsbetiae_contig1598:21132..21264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 21133..21264 +
1691683019.3916686-CDS-L-elsbetiae_contig1598:21132..212641691683019.3916686-CDS-L-elsbetiae_contig1598:21132..21264Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 21133..21264 +
1622815657.9656293-CDS-L-elsbetiae_contig1598:21640..219671622815657.9656293-CDS-L-elsbetiae_contig1598:21640..21967Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 21641..21967 +
1691683019.4022534-CDS-L-elsbetiae_contig1598:21640..219671691683019.4022534-CDS-L-elsbetiae_contig1598:21640..21967Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 21641..21967 +
1622815657.977224-CDS-L-elsbetiae_contig1598:22796..235691622815657.977224-CDS-L-elsbetiae_contig1598:22796..23569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 22797..23569 +
1691683019.4108121-CDS-L-elsbetiae_contig1598:22796..235691691683019.4108121-CDS-L-elsbetiae_contig1598:22796..23569Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1598 22797..23569 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1598.4122.1

>prot_L-elsbetiae_contig1598.4122.1 ID=prot_L-elsbetiae_contig1598.4122.1|Name=mRNA_L-elsbetiae_contig1598.4122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=449bp
MAEEHYQEEDRSAAKTLWLGDVQPEWTEEYVESLFSSIAGQELEVKLIRD
RHRGIVAGYGFIDFRNHETAQLVLDTLNGKPIEGTSLRYRLNWGAGGKRI
EQAPEYSVFVGDLSPEVTDADLKQTFENKPYSSVLGAKVVTNPMTGSSKS
FGFIRFGDEQERDDALTSMNGAECCGRPIRVAPATKRTSVQGQTGAHATD
PSNTTVFVGGINDSVNEKVLRDTFSSTGEIHTVTTPPGRGCAFVTFAHRA
SAEHVINNLQGTTVCGSCVRLSWGKSGRADRDRERERAGEPLGMGGMGVQ
SSPTAAAAAAAAAAAARGAQYSGLYGHPQSYASYNGGAYPANMFPAGAVY
GGAAFPQPGQQQQPGQQQAGLAPPATTGTGQLPQQQQHQQAAVAQQAAVQ
QQAVAAQQQYAPQPYSQSYAPYQGFGFQQYPAQQQAAYTSFTGTNAPYA
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mRNA from alignment at L-elsbetiae_contig1598:20529..23569+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1598.4122.1 ID=mRNA_L-elsbetiae_contig1598.4122.1|Name=mRNA_L-elsbetiae_contig1598.4122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3041bp|location=Sequence derived from alignment at L-elsbetiae_contig1598:20529..23569+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGAAGAGCATTACCAGGAAGAGGACCGCTCTGCTGCCAAAACGTT GTGGTTGGGCGATGTGCAGGTGGGAACTACGGGTCAGATACAACTATCGT CGTGTTTGCCAAAGATTGCCTTTCTCTGGTGTCGCTTGCCAGCATCAGAT TCAGTGCGAAGACTCGTCTACCCTCATGTACGTGGACCGCGAACGGCTCC TTGACGCTAAGATCCTCGTCATGTCCGAATGCTATCGTTCCCAGTGTCGT CGGCTTTTTGCATCGATTTCTCCACCTCGATTCTCCAACTCCTGCCTATT TATCAGTTATCGATCATCCAACAGACAAGACCGACCCACAACATCAAAAT TCGATTTTTTTAATGCCGCTGTCTGCCCTTGTGTTGCCCCTCCCCGCCGC CTGTGGTCCCCCTGTGTCTTTCGCAACAGCCCGAGTGGACTGAGGAATAC GTGGAGAGTCTGTTTAGCAGCATAGGTGAGTTCCGTTGGTGTCTAACGGG GGTAGAAAGGGAAGTCTTAGACTTGTGGACTTTTACCCGCCGCCTGCCGA CCTCTCCATCCATCCTGCCATCATGCTCGTTCACCTTTTTTTTTTTTTTT CGAGCAGGACAGGAGCTAGAGGTCAAGCTCATACGTGATAGGCACAGAGG CATTGTAGCTGGCTACGGATTCATCGACTTCCGAAACCACGAGACGGCGC AGCTCGTCCTCGACACATTGAATGGGAAACCCATCGGTGAGGAAGTGTAG ATAGACGACACTATATTTTATGCGGACAAAGAGCCAGAAACGCAGCAGCG GTTTAATGCCACGGCGGCGCCACACTACATGAGCGTCATGTTCCGTCGAG GCTGCGACTTTTCCCCGAGCGCGAACCTCAGCGTGCAATCCTGGTGGTTG TCTACTGCAACGTTCGTCTCTCCCCTCGTTTTATTTTGGGATGACCCCTA CCTGTGGTTCAGCGTCAATTACGGGCTGTGTGTTTCCACTTCCACGCATT TCCACCGACAAAGTACCTGTCAAGGTCAAGGTGCCTTCCCACCTCCTACA GACCACAAAGGGGTTGAAAAGATCACCCGCCTCTGAATTTGTCAAACTTT TTTGTCGCGCAGAGGGTACCTCCCTGCGCTACCGGCTGAACTGGGGCGCG GGAGGGAAGCGTATAGAGCAGGCGCCAGAGTACTCCGTGTTTGTCGGAGA CCTCTCCCCCGAGGTCACCGATGCCGACCTGAAGCAGACGTTCGAAAACA AGCCCTACTCGTCGGTTCTCGGAGCGAAGGTGGTGACCAACCCGATGACC GGCTCCTCCAAGAGCTTCGGGTTCATCAGGTTTGGAGATGAGCAAGAGAG GGACGACGCGCTCACGTCCATGAACGGGGCGGAGTGCTGCGGTCGCCCGA TCCGTGTGGCGCCCGCAACCAAGCGCACGAGCGTTCAAGGTATGTTTGTA TATACGTTCAAACCTCAAACCTGTGTTTTTTTGTTGCTGCTGATCTCTTC GTCGAGCGTCAGTCATCATATAACAACAGCCCGTTTGCGTTTGTTGTTGT TGTTGTTGGTGGTGGTGTTGGTTATCTCTTGAATTCGCTCTCTTCCTCGC AACGCAGGGCACACTTGCCGTGGCACAGAGGAGCACACCCGCCGCTGCTG AACAAAAGTAAATCAATACAACAAAGCAGCGTATGTGCATATGTGCATAT GTCGATTGGTATTGATGCAGGTGCTGCGTTCTTTGGTGATCTCTCCAAGA AATCGGAACGGTTGTGTCTTCACGAATTTACGAATCTGGTCGATGAAAAC GGAGAAACACCATCACTTATTTATATGACTTGAAATTACTCGGAGGTTCA TGTCAGTAGTGACTGCTTCAGCATGTGTTTGCGTGATGTTCGCATGGATA CATACATGTACTCCCGTCACGTAAAGTCCACACTACCTGTAAAAAAACGC ACCTACCTGAAGAACACCGTGAACATTGAAGAGCGCGTACATTTCTGTCT TCCCAAATTATTCGTACATTTCGTCGGCAGGGGGCGTGTTCTTCGCGACG TCATACATACGTGTCTACATGCACACACACATACGTATATACGCGACCAA AAAAAATGAACCCCATGTTGAGCCTTGCTCTCTTGTGGGGTAGGTTTCCA TCTTTGATTTATTGTTTGTTTAAAAAAAAAACGCCCCCCCCTCGATCTAG CTCCGTCGTCTGCTGGCACCCTCCCCGCTGCTGCCCGACTGACGCTCACG CCCCACAAAACAAAACAGGTCAGACCGGAGCGCACGCGACAGACCCCAGC AACACCACGGTGTTTGTCGGCGGCATCAACGACTCCGTCAACGAGAAGGT CCTCCGCGACACCTTCTCGAGCACCGGAGAGATCCACACCGTCACGACGC CGCCCGGCCGCGGGTGCGCCTTCGTGACCTTCGCGCACCGGGCCAGCGCG GAGCACGTCATCAACAACCTGCAGGGCACGACCGTCTGCGGCAGCTGCGT GCGCCTCTCGTGGGGCAAGTCCGGCCGCGCCGACCGCGATCGAGAGAGGG AGCGAGCCGGGGAGCCCCTGGGCATGGGCGGCATGGGCGTGCAGTCTTCG CCAACCGCCGCGGCCGCCGCCGCCGCCGCTGCCGCCGCCGCCCGGGGCGC CCAGTACTCCGGCCTCTACGGCCACCCCCAGTCGTACGCGTCGTACAACG GCGGGGCGTACCCGGCCAACATGTTTCCCGCAGGGGCGGTGTACGGCGGC GCCGCTTTCCCGCAGCCCGGGCAGCAGCAGCAGCCCGGGCAGCAGCAGGC AGGCCTTGCCCCGCCGGCGACCACCGGCACGGGCCAGCTGCCGCAGCAGC AGCAACATCAGCAGGCGGCGGTGGCGCAGCAGGCCGCGGTGCAGCAGCAG GCGGTCGCTGCGCAGCAGCAGTACGCCCCGCAGCCGTACTCGCAGTCCTA CGCTCCTTACCAGGGCTTCGGCTTCCAGCAGTACCCCGCGCAGCAGCAGG CGGCTTACACGAGCTTCACGGGTACCAACGCCCCCTACGCG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1598:20529..23569+

>mRNA_L-elsbetiae_contig1598.4122.1 ID=mRNA_L-elsbetiae_contig1598.4122.1|Name=mRNA_L-elsbetiae_contig1598.4122.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2694bp|location=Sequence derived from alignment at L-elsbetiae_contig1598:20529..23569+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTGAAGAGCATTACCAGGAAGAGGACCGCTCTGCTGCCAAAACGTT
GTGGTTGGGCGATGTGCAGATGGCTGAAGAGCATTACCAGGAAGAGGACC
GCTCTGCTGCCAAAACGTTGTGGTTGGGCGATGTGCAGCCCGAGTGGACT
GAGGAATACGTGGAGAGTCTGTTTAGCAGCATAGCCCGAGTGGACTGAGG
AATACGTGGAGAGTCTGTTTAGCAGCATAGCAGGACAGGAGCTAGAGGTC
AAGCTCATACGTGATAGGCACAGAGGCATTGTAGCTGGCTACGGATTCAT
CGACTTCCGAAACCACGAGACGGCGCAGCTCGTCCTCGACACATTGAATG
GGAAACCCATCGCAGGACAGGAGCTAGAGGTCAAGCTCATACGTGATAGG
CACAGAGGCATTGTAGCTGGCTACGGATTCATCGACTTCCGAAACCACGA
GACGGCGCAGCTCGTCCTCGACACATTGAATGGGAAACCCATCGAGGGTA
CCTCCCTGCGCTACCGGCTGAACTGGGGCGCGGGAGGGAAGCGTATAGAG
CAGGCGCCAGAGTACTCCGTGTTTGTCGGAGACCTCTCCCCCGAGGTCAC
CGATGCCGACCTGAAGCAGACGTTCGAAAACAAGCCCTACTCGTCGGTTC
TCGGAGCGAAGGTGGTGACCAACCCGATGACCGGCTCCTCCAAGAGCTTC
GGGTTCATCAGGTTTGGAGATGAGCAAGAGAGGGACGACGCGCTCACGTC
CATGAACGGGGCGGAGTGCTGCGGTCGCCCGATCCGTGTGGCGCCCGCAA
CCAAGCGCACGAGCGTTCAAGAGGGTACCTCCCTGCGCTACCGGCTGAAC
TGGGGCGCGGGAGGGAAGCGTATAGAGCAGGCGCCAGAGTACTCCGTGTT
TGTCGGAGACCTCTCCCCCGAGGTCACCGATGCCGACCTGAAGCAGACGT
TCGAAAACAAGCCCTACTCGTCGGTTCTCGGAGCGAAGGTGGTGACCAAC
CCGATGACCGGCTCCTCCAAGAGCTTCGGGTTCATCAGGTTTGGAGATGA
GCAAGAGAGGGACGACGCGCTCACGTCCATGAACGGGGCGGAGTGCTGCG
GTCGCCCGATCCGTGTGGCGCCCGCAACCAAGCGCACGAGCGTTCAAGGT
CAGACCGGAGCGCACGCGACAGACCCCAGCAACACCACGGTGTTTGTCGG
CGGCATCAACGACTCCGTCAACGAGAAGGTCCTCCGCGACACCTTCTCGA
GCACCGGAGAGATCCACACCGTCACGACGCCGCCCGGCCGCGGGTGCGCC
TTCGTGACCTTCGCGCACCGGGCCAGCGCGGAGCACGTCATCAACAACCT
GCAGGGCACGACCGTCTGCGGCAGCTGCGTGCGCCTCTCGTGGGGCAAGT
CCGGCCGCGCCGACCGCGATCGAGAGAGGGAGCGAGCCGGGGAGCCCCTG
GGCATGGGCGGCATGGGCGTGCAGTCTTCGCCAACCGCCGCGGCCGCCGC
CGCCGCCGCTGCCGCCGCCGCCCGGGGCGCCCAGTACTCCGGCCTCTACG
GCCACCCCCAGTCGTACGCGTCGTACAACGGCGGGGCGTACCCGGCCAAC
ATGTTTCCCGCAGGGGCGGTGTACGGCGGCGCCGCTTTCCCGCAGCCCGG
GCAGCAGCAGCAGCCCGGGCAGCAGCAGGCAGGCCTTGCCCCGCCGGCGA
CCACCGGCACGGGCCAGCTGCCGCAGCAGCAGCAACATCAGCAGGCGGCG
GTGGCGCAGCAGGCCGCGGTGCAGCAGCAGGCGGTCGCTGCGCAGCAGCA
GTACGCCCCGCAGCCGTACTCGCAGTCCTACGCTCCTTACCAGGGCTTCG
GCTTCCAGCAGTACCCCGCGCAGCAGCAGGCGGCTTACACGAGCTTCACG
GGTACCAACGCCCCCTACGCGGTCAGACCGGAGCGCACGCGACAGACCCC
AGCAACACCACGGTGTTTGTCGGCGGCATCAACGACTCCGTCAACGAGAA
GGTCCTCCGCGACACCTTCTCGAGCACCGGAGAGATCCACACCGTCACGA
CGCCGCCCGGCCGCGGGTGCGCCTTCGTGACCTTCGCGCACCGGGCCAGC
GCGGAGCACGTCATCAACAACCTGCAGGGCACGACCGTCTGCGGCAGCTG
CGTGCGCCTCTCGTGGGGCAAGTCCGGCCGCGCCGACCGCGATCGAGAGA
GGGAGCGAGCCGGGGAGCCCCTGGGCATGGGCGGCATGGGCGTGCAGTCT
TCGCCAACCGCCGCGGCCGCCGCCGCCGCCGCTGCCGCCGCCGCCCGGGG
CGCCCAGTACTCCGGCCTCTACGGCCACCCCCAGTCGTACGCGTCGTACA
ACGGCGGGGCGTACCCGGCCAACATGTTTCCCGCAGGGGCGGTGTACGGC
GGCGCCGCTTTCCCGCAGCCCGGGCAGCAGCAGCAGCCCGGGCAGCAGCA
GGCAGGCCTTGCCCCGCCGGCGACCACCGGCACGGGCCAGCTGCCGCAGC
AGCAGCAACATCAGCAGGCGGCGGTGGCGCAGCAGGCCGCGGTGCAGCAG
CAGGCGGTCGCTGCGCAGCAGCAGTACGCCCCGCAGCCGTACTCGCAGTC
CTACGCTCCTTACCAGGGCTTCGGCTTCCAGCAGTACCCCGCGCAGCAGC
AGGCGGCTTACACGAGCTTCACGGGTACCAACGCCCCCTACGCG
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