prot_L-elsbetiae_contig1597.4116.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1597.4116.1
Unique Nameprot_L-elsbetiae_contig1597.4116.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
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BLAST of mRNA_L-elsbetiae_contig1597.4116.1 vs. uniprot
Match: D7G1J7_ECTSI (Ubiquinone Biosynthesis Monooxygenase COQ6 (C-terminal region) Ubiquinone Biosynthesis Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J7_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 5.300e-33
Identity = 78/149 (52.35%), Postives = 97/149 (65.10%), Query Frame = 0 
Query:    2 LLGSAARWRRSWIGAARSRANSRVARALSDSAGDLGDE---WEYDHDVLVVGGGIVGCTLACRLAQDFAAASSPRSSLSRAAGAGTAAAEVDDNASPRRRGRRRPSVGLIEARPPPTLEAALARGSADPRVYSLAPSSVDVLREVGVWD 147
            +LGS   WR S + A+R+    R  RA S +   LGD+   WEYDHDVLVVGGGIVGCTLACRLA+D ++ +     L   +   T   +              P+VGLIEARPPP+LEAALARG+ DPRVYSLAPSSV++L ++GVWD
Sbjct:    1 MLGSGMAWRHSRVAASRNMTRLRSHRAFSSAPAGLGDKAAGWEYDHDVLVVGGGIVGCTLACRLAKDLSSTTPSTIGLPPLS---TGKDDGXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGAPDPRVYSLAPSSVEILGKLGVWD 146
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BLAST of mRNA_L-elsbetiae_contig1597.4116.1 vs. uniprot
Match: A0A6H5KHF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHF3_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 7.000e-31
Identity = 65/108 (60.19%), Postives = 76/108 (70.37%), Query Frame = 0 
Query:   40 WEYDHDVLVVGGGIVGCTLACRLAQDFAAASSPRSSLSRAAGAGTAAAEVDDNASPRRRGRRRPSVGLIEARPPPTLEAALARGSADPRVYSLAPSSVDVLREVGVWD 147
            WEYDHDVLVVGGGIVGCTLACRLA+D ++ +   S L   +   T                  P+VGLIEARPPP+LEAALARGS DPRVYSLAPSSV++L ++GVWD
Sbjct:    3 WEYDHDVLVVGGGIVGCTLACRLAKDLSSTTPSTSGLPPLS---TGKDXXXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGSPDPRVYSLAPSSVEILGKLGVWD 107
[Close]
BLAST of mRNA_L-elsbetiae_contig1597.4116.1 vs. uniprot
Match: W7U180_9STRA (Ubiquinone biosynthesis monooxygenase coq6 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U180_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 3.320e-5
Identity = 42/130 (32.31%), Postives = 59/130 (45.38%), Query Frame = 0 
Query:   25 VARALSDSA--GDLGDEWEYDHDVLVVGGGIVGCTLACRLAQDFAAASSPRSSLSRAAGAGTAAAEVDDNASPRRRGRRRPSVGLIEARPPPTLEAALARGSADPRVYSLAPSSVDVLREVGVWDGVRSR 152
            + R  S +A  G   D W+YD  V+++GGGIVG +LAC LA++          + +  G   A  E+            RP        PPP           DPRVY+LAP+SV  L  +G W  ++ R
Sbjct:   19 IGRLFSSTAPHGTSTDSWDYD--VIILGGGIVGASLACSLAEN----------VGQRHGMKIALLEI------------RP--------PPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQLIKDR 116
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1597.4116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1J7_ECTSI5.300e-3352.35Ubiquinone Biosynthesis Monooxygenase COQ6 (C-term... [more]
A0A6H5KHF3_9PHAE7.000e-3160.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7U180_9STRA3.320e-532.31Ubiquinone biosynthesis monooxygenase coq6 n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3D3.50.50.60coord: 42..157
e-value: 8.2E-11
score: 43.4
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 38..148
NoneNo IPR availablePANTHERPTHR43876:SF7UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIALcoord: 43..151
NoneNo IPR availablePANTHERPTHR43876FAMILY NOT NAMEDcoord: 43..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1597contigL-elsbetiae_contig1597:19935..21810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1597.4116.1mRNA_L-elsbetiae_contig1597.4116.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1597 19909..21810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1597.4116.1 ID=prot_L-elsbetiae_contig1597.4116.1|Name=mRNA_L-elsbetiae_contig1597.4116.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MLLGSAARWRRSWIGAARSRANSRVARALSDSAGDLGDEWEYDHDVLVVG
GGIVGCTLACRLAQDFAAASSPRSSLSRAAGAGTAAAEVDDNASPRRRGR
RRPSVGLIEARPPPTLEAALARGSADPRVYSLAPSSVDVLREVGVWDGVR
SRGAGEEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf