mRNA_L-elsbetiae_contig10.41.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig10.41.1
Unique NamemRNA_L-elsbetiae_contig10.41.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: A0A0R6LUT6_UNDPI (CfxQ-like protein n=37 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6LUT6_UNDPI)

HSP 1 Score: 548 bits (1411), Expect = 6.730e-196
Identity = 283/300 (94.33%), Postives = 292/300 (97.33%), Query Frame = 1
Query:    1 LEVTKNLENLSLEKSLNLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVFSL 900
            +E  K+LENLSLEK+LNLKQVYLDTQIK IIDIL EELVGL+PVKTRIQEISALLVIDKLRE+LGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRD+LVIIFAGYKERMEQFY+SNPGLSSRIANHVDFPDYS DELLIIAKMMLEEQQYQFSPEAEPAFL YI+ RREQPLFANARSIRNSLDRARMRQANRNFDSGGR+LTKADLVTITDADI ASSVFSL
Sbjct:    1 METPKSLENLSLEKNLNLKQVYLDTQIKTIIDILEEELVGLIPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDDLVIIFAGYKERMEQFYSSNPGLSSRIANHVDFPDYSPDELLIIAKMMLEEQQYQFSPEAEPAFLNYILKRREQPLFANARSIRNSLDRARMRQANRNFDSGGRVLTKADLVTITDADITASSVFSL 300          
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: A0A2I4Q2G3_9PHAE (CfxQ protein-like protein n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I4Q2G3_9PHAE)

HSP 1 Score: 507 bits (1305), Expect = 8.810e-180
Identity = 256/294 (87.07%), Postives = 278/294 (94.56%), Query Frame = 1
Query:   16 NLENLSLEKSLNLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVFS 897
            NL+ L+ EK+LNLKQVYLDT+IK+IIDILNEELVGL+PVKTRIQEISALL+IDKLR++LG TTGNPGLHMSFTGSPGTGKTTVATRM+DILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKE+LKKAMGG+LFIDEAYYLYKPDNERDYG+EAIEILLQVMENQRD +V+IFAGYK+RM+QFY SNPGLSSRIANHV+FPDY+SDELLIIAKMMLEEQQYQFS  AE  F EYI  RR QPLFANARSIRN+LDRARMRQANRNFDSGGRILTK DLVTITD DIK SS+F+
Sbjct:    5 NLDTLAPEKNLNLKQVYLDTEIKNIIDILNEELVGLIPVKTRIQEISALLIIDKLRKNLGLTTGNPGLHMSFTGSPGTGKTTVATRMSDILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEILKKAMGGILFIDEAYYLYKPDNERDYGAEAIEILLQVMENQRDSIVVIFAGYKDRMDQFYASNPGLSSRIANHVNFPDYTSDELLIIAKMMLEEQQYQFSTSAEKVFFEYIAKRRTQPLFANARSIRNALDRARMRQANRNFDSGGRILTKLDLVTITDEDIKQSSIFN 298          
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: A0A8E5XRP4_9PHAE (Rubisco expression protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRP4_9PHAE)

HSP 1 Score: 506 bits (1302), Expect = 2.810e-179
Identity = 257/293 (87.71%), Postives = 280/293 (95.56%), Query Frame = 1
Query:   16 NLENLSLEKSLNLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVF 894
            N+++LS+EKSLNLKQVYLDTQIK IIDILN+ELVGL+PVKTRIQEI+ALLVIDKLRE+LGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLG+SKKGHLLTVTRDDLVGQ+IGHTAPKTKEVLKKAMGG+LFIDEAYYLYKPDNERDYG+EAIEILLQVMENQRD LV+I AGYK+RMEQFY SNPGLSSRIANHVDFPDYSS+ELLIIAKMMLEEQQYQF+  AE AFL+YI  RR  PLFANARS+RN+LDRARMRQANRNF++GGRILTKADLVTITD DI+ SS+F
Sbjct:    7 NIQHLSVEKSLNLKQVYLDTQIKTIIDILNQELVGLLPVKTRIQEIAALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGYSKKGHLLTVTRDDLVGQFIGHTAPKTKEVLKKAMGGILFIDEAYYLYKPDNERDYGAEAIEILLQVMENQRDSLVVILAGYKDRMEQFYASNPGLSSRIANHVDFPDYSSEELLIIAKMMLEEQQYQFTQSAEIAFLDYIKKRRSLPLFANARSVRNALDRARMRQANRNFETGGRILTKADLVTITDEDIRQSSIF 299          
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: A0A1L2F1Z1_9PHAE (Cbbx n=16 Tax=Fucales TaxID=3009 RepID=A0A1L2F1Z1_9PHAE)

HSP 1 Score: 505 bits (1301), Expect = 4.000e-179
Identity = 260/300 (86.67%), Postives = 279/300 (93.00%), Query Frame = 1
Query:    1 LEVTKNLENLSLEKSLNLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVFSL 900
            +E  K LE LS +K+LNLKQVYLDTQI+ IIDILN+ELVGL PVK RIQEISALLVIDKLR++LGFT GNPGLHMSFTGSPGTGKTTVATRM DILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKA+GGLLFIDEAYYLYKPDNERDYG+EAIEILLQVMENQRD+LVIIFAGYK+RMEQFY SNPGLSSRI+NHVDFPDYSS+ELLII+KMMLEEQQYQFSP AE  FL+YI  RREQPLFANARSIRN+LDRARMRQANRNFD+ GR+LTKADLVTI + DI  SSVFSL
Sbjct:    1 MENVKKLETLSQDKNLNLKQVYLDTQIQKIIDILNQELVGLKPVKKRIQEISALLVIDKLRQNLGFTVGNPGLHMSFTGSPGTGKTTVATRMGDILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAIGGLLFIDEAYYLYKPDNERDYGAEAIEILLQVMENQRDDLVIIFAGYKDRMEQFYASNPGLSSRISNHVDFPDYSSEELLIISKMMLEEQQYQFSPTAEAVFLDYIKKRREQPLFANARSIRNALDRARMRQANRNFDNSGRLLTKADLVTIMEQDITKSSVFSL 300          
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: A0A7S6U9U8_9STRA (CbbX n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9U8_9STRA)

HSP 1 Score: 469 bits (1208), Expect = 5.590e-165
Identity = 240/297 (80.81%), Postives = 272/297 (91.58%), Query Frame = 1
Query:   13 KNLENLSLEKSLNLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVFSLN 903
            +N E LSLEK+LNLKQVY +TQI+ +ID+L++ELVGLVPVKTRIQEI+ALLVIDKLR++LGF T +PGLHMSFTGSPGTGKTTVA RMADIL+KLG+  KGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGG+LFIDEAYYLYKPDNERDYG+EAIEILLQVMENQRD LV+I AGYK+RME+FY SNPGLSSRIANHVDFPDYSS ELL I+KMMLEEQQYQF+  AE AFL+YI  R++QPLFANARS+RN+LDRARMRQANRNF+S G +LTKADLVTI D DI  SS+F+++
Sbjct:    4 QNFETLSLEKNLNLKQVYSNTQIQLVIDLLDQELVGLVPVKTRIQEIAALLVIDKLRDNLGFNTSSPGLHMSFTGSPGTGKTTVALRMADILYKLGYCSKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGILFIDEAYYLYKPDNERDYGAEAIEILLQVMENQRDALVVILAGYKDRMERFYASNPGLSSRIANHVDFPDYSSTELLTISKMMLEEQQYQFTQLAEEAFLDYIKKRQQQPLFANARSVRNALDRARMRQANRNFESPG-VLTKADLVTIKDVDITQSSIFNIS 299          
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: A0A0K1IJF1_9STRA (Putative rubisco expression protein CfxQ n=2 Tax=Xanthophyceae TaxID=2833 RepID=A0A0K1IJF1_9STRA)

HSP 1 Score: 465 bits (1196), Expect = 3.620e-163
Identity = 237/300 (79.00%), Postives = 272/300 (90.67%), Query Frame = 1
Query:    1 LEVTKNLENLSLEKSLNLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVFSL 900
            + +  NLE LS  KSLNLKQ Y DTQI+ +IDIL EELVGLVPVK+RI+EI+ALLVID+LR+ +  T+ +PGLHMSFTGSPGTGKTTVA RMADIL+KLG+ +KGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGG+LFIDEAYYLYKPDNERDYG+EAIEILLQVMENQRD+LV+I AGYK+RME+FY SNPGLSSRIANHVDFPDYS++ELL I K+MLEEQQYQF+P+AE AFL+YI  R+EQPLFANARS++N+LDRARMRQANRNF++ G+ILTKADLVTIT  DIK S VF+L
Sbjct:    1 MSIPGNLE-LSTTKSLNLKQEYKDTQIQRVIDILEEELVGLVPVKSRIREIAALLVIDRLRKKVNLTSNSPGLHMSFTGSPGTGKTTVALRMADILYKLGYCRKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGILFIDEAYYLYKPDNERDYGAEAIEILLQVMENQRDDLVVILAGYKDRMEKFYESNPGLSSRIANHVDFPDYSAEELLTIGKIMLEEQQYQFTPDAEKAFLDYIQKRKEQPLFANARSVKNALDRARMRQANRNFENAGKILTKADLVTITANDIKQSRVFTL 299          
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: B7T200_VAULI (CfxQ-like protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T200_VAULI)

HSP 1 Score: 444 bits (1141), Expect = 8.500e-155
Identity = 225/296 (76.01%), Postives = 267/296 (90.20%), Query Frame = 1
Query:   13 KNLENLSLEKSLNLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVFSL 900
            +NLE LS  KSL+LKQ Y +T+I+ +IDIL EELVGL+PVKTRI+EI+ALL+ID+LR+ +  T+ +PGL+MSFTGSPGTGKTTVA RMADIL+KLG+ KKGH+LTVTRDDLVGQYIGHTAPKTK++LKKAMGG+LFIDEAYYLYKPDNERDYG+EAIEILLQVMENQRD L++I AGYK+RME+FY SNPGLSSRI+NHVDFP+Y+++ELL+I K+MLEEQQYQF PEAE AFL+YI  R+EQPLFANARS++N+LDRARMR ANR F++G RILTKADLV IT  DIK S VF+L
Sbjct:    5 RNLE-LSTIKSLSLKQEYENTKIQRVIDILEEELVGLIPVKTRIREIAALLIIDRLRKKVDLTSNSPGLNMSFTGSPGTGKTTVALRMADILYKLGYCKKGHMLTVTRDDLVGQYIGHTAPKTKKILKKAMGGILFIDEAYYLYKPDNERDYGAEAIEILLQVMENQRDNLIVILAGYKDRMEKFYESNPGLSSRISNHVDFPNYTAEELLVIGKIMLEEQQYQFVPEAEIAFLDYIKKRKEQPLFANARSVKNALDRARMRHANRIFENGNRILTKADLVNITVEDIKQSRVFTL 299          
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: A0A7S4S9Y1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S9Y1_9STRA)

HSP 1 Score: 431 bits (1108), Expect = 6.480e-150
Identity = 217/284 (76.41%), Postives = 255/284 (89.79%), Query Frame = 1
Query:   46 LNLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVFS 897
            +NL++ Y  T+I  I+++LNEELVGLVPVK+RI+EI+ALL++DKLR+SLG T+G+PGLHMSFTGSPGTGKTTV  +MADILF+LG+  KGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGG+LFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELV+I AGYKE M++FY SNPGLSSRIANH+DFPDY+ DELL I+K+MLE+QQYQ +PEAE AF+ YI  R+E+PLFANARSI+N+LDRARMRQANR FDS G++LTK +LV I   DI  S+VF+
Sbjct:    6 VNLQEEYQKTEIAKILNLLNEELVGLVPVKSRIREIAALLLVDKLRKSLGITSGSPGLHMSFTGSPGTGKTTVGLKMADILFQLGYITKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGVLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVVILAGYKEPMDKFYASNPGLSSRIANHIDFPDYTVDELLKISKLMLEDQQYQLTPEAETAFISYIEKRKEKPLFANARSIKNALDRARMRQANRIFDSRGQVLTKRELVNIEAEDILQSTVFN 289          
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: A0A1X9PUC4_9RHOD (CfxQ protein homolog n=2 Tax=Bangiopsis subsimplex TaxID=139980 RepID=A0A1X9PUC4_9RHOD)

HSP 1 Score: 429 bits (1104), Expect = 3.140e-149
Identity = 216/291 (74.23%), Postives = 256/291 (87.97%), Query Frame = 1
Query:   22 ENLSLEKSLNLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVF 894
            E +S +  +NL++ Y  TQI++I+D LN EL+GL PVKTRI+EI+ALL+ID+LR+S+   +  PGLHMSFTGSPGTGKTTVA RMADIL +LG+S+KGHLLTVTRDDLVGQYIGHTAPKTKEVLK+AMGG+LFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRD+LV++FAGYK+RM++FY SNPGLSSR+ANHVDFPDYS +EL+ IAK+ML+EQQY+F+ EAE A  +YI  R EQPLFANARSIRN++DRARMRQANR F SGGR+LTKADLVT+   DI  S +F
Sbjct:    4 EQISPDTLVNLREEYQKTQIQEILDQLNRELIGLTPVKTRIREIAALLLIDRLRKSIKLASNTPGLHMSFTGSPGTGKTTVAIRMADILHRLGYSRKGHLLTVTRDDLVGQYIGHTAPKTKEVLKQAMGGVLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDDLVVVFAGYKDRMDEFYKSNPGLSSRVANHVDFPDYSVEELVSIAKLMLQEQQYRFTSEAEGALSQYIKKRMEQPLFANARSIRNAIDRARMRQANRIFASGGRVLTKADLVTLEAEDILKSRLF 294          
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Match: B2XT18_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT18_HETAK)

HSP 1 Score: 429 bits (1102), Expect = 7.050e-149
Identity = 216/283 (76.33%), Postives = 252/283 (89.05%), Query Frame = 1
Query:   49 NLKQVYLDTQIKDIIDILNEELVGLVPVKTRIQEISALLVIDKLRESLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDELVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEEQQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDSGGRILTKADLVTITDADIKASSVFS 897
            NLK  Y ++QI+ +IDIL  EL+GL PVK+RI+EI+ALL++DKLR++LG  + +PGLHMSFTGSPGTGKTTVA RMADIL+KLG+S+KGHL+TVTRDDLVGQYIGHTAPKTKEVLKKAMGG+LFIDEAYYLYKPDNERDYG+EAIEILLQVMENQRD+LV+I AGYKE+ME+FY SNPGLSSRIANHVDFPDYS +ELL I K+MLEEQQY  +P+AE  FL+YI  R ++PLFANARS+RN+LDRARMRQANR F+S GR LTKADLVTI   DI  SS+F+
Sbjct:   15 NLKVEYEESQIQRVIDILESELIGLKPVKSRIREIAALLLVDKLRKNLGLVSSSPGLHMSFTGSPGTGKTTVALRMADILYKLGYSRKGHLITVTRDDLVGQYIGHTAPKTKEVLKKAMGGILFIDEAYYLYKPDNERDYGAEAIEILLQVMENQRDDLVVILAGYKEKMEKFYESNPGLSSRIANHVDFPDYSPEELLQIGKIMLEEQQYVLTPDAEKVFLDYIKIRMQKPLFANARSVRNALDRARMRQANRVFESAGRTLTKADLVTIVPDDIFKSSLFN 297          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R6LUT6_UNDPI6.730e-19694.33CfxQ-like protein n=37 Tax=Phaeophyceae TaxID=2870... [more]
A0A2I4Q2G3_9PHAE8.810e-18087.07CfxQ protein-like protein n=2 Tax=Phaeophyceae Tax... [more]
A0A8E5XRP4_9PHAE2.810e-17987.71Rubisco expression protein n=1 Tax=Ishige okamurae... [more]
A0A1L2F1Z1_9PHAE4.000e-17986.67Cbbx n=16 Tax=Fucales TaxID=3009 RepID=A0A1L2F1Z1_... [more]
A0A7S6U9U8_9STRA5.590e-16580.81CbbX n=1 Tax=Schizocladia ischiensis TaxID=196139 ... [more]
A0A0K1IJF1_9STRA3.620e-16379.00Putative rubisco expression protein CfxQ n=2 Tax=X... [more]
B7T200_VAULI8.500e-15576.01CfxQ-like protein n=1 Tax=Vaucheria litorea TaxID=... [more]
A0A7S4S9Y1_9STRA6.480e-15076.41Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A1X9PUC4_9RHOD3.140e-14974.23CfxQ protein homolog n=2 Tax=Bangiopsis subsimplex... [more]
B2XT18_HETAK7.050e-14976.33Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10contigL-elsbetiae_contig10:76011..76954 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score358.6
Seed ortholog evalue2.1e-96
Seed eggNOG ortholog35128.Thapsdraft1306
Preferred namecfxQ
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009536,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.ATPase family associated with various cellular activities (AAA)
EggNOG OGs2XFQN@2836,COG0464@1,KOG0730@2759
COG Functional cat.O
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Exons1
Model size944
Cds size684
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10.41.1prot_L-elsbetiae_contig10.41.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig10 76233..76916 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815233.2280498-UTR-L-elsbetiae_contig10:76010..762321622815233.2280498-UTR-L-elsbetiae_contig10:76010..76232Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10 76011..76232 +
1691682784.5174947-UTR-L-elsbetiae_contig10:76010..762321691682784.5174947-UTR-L-elsbetiae_contig10:76010..76232Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10 76011..76232 +
1622815233.2558942-UTR-L-elsbetiae_contig10:76916..769541622815233.2558942-UTR-L-elsbetiae_contig10:76916..76954Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10 76917..76954 +
1691682784.549256-UTR-L-elsbetiae_contig10:76916..769541691682784.549256-UTR-L-elsbetiae_contig10:76916..76954Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig10 76917..76954 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815233.2419534-CDS-L-elsbetiae_contig10:76232..769161622815233.2419534-CDS-L-elsbetiae_contig10:76232..76916Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 76233..76916 +
1691682784.527444-CDS-L-elsbetiae_contig10:76232..769161691682784.527444-CDS-L-elsbetiae_contig10:76232..76916Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig10 76233..76916 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig10.41.1

>prot_L-elsbetiae_contig10.41.1 ID=prot_L-elsbetiae_contig10.41.1|Name=mRNA_L-elsbetiae_contig10.41.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp
MSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTA
PKTKEVLKKAMGGLLFIDEAYYLYKPDNERDYGSEAIEILLQVMENQRDE
LVIIFAGYKERMEQFYTSNPGLSSRIANHVDFPDYSSDELLIIAKMMLEE
QQYQFSPEAEPAFLEYIMTRREQPLFANARSIRNSLDRARMRQANRNFDS
GGRILTKADLVTITDADIKASSVFSLN*
back to top

mRNA from alignment at L-elsbetiae_contig10:76011..76954+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig10.41.1 ID=mRNA_L-elsbetiae_contig10.41.1|Name=mRNA_L-elsbetiae_contig10.41.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=944bp|location=Sequence derived from alignment at L-elsbetiae_contig10:76011..76954+ (Laminarionema elsbetiae ELsaHSoW15)
CTCGAAGTAACAAAAAATTTAGAGAACTTATCTTTAGAAAAAAGTTTAAA TTTAAAACAAGTTTACTTGGATACGCAAATAAAAGATATCATTGATATAC TTAATGAAGAGTTAGTAGGTTTAGTCCCTGTAAAAACAAGAATCCAAGAA ATATCAGCATTACTAGTAATAGACAAATTACGAGAAAGTTTGGGTTTCAC GACTGGAAATCCAGGTCTCCACATGTCTTTTACTGGGAGTCCTGGGACAG GTAAAACTACTGTGGCAACACGCATGGCAGATATACTTTTTAAGTTAGGT CACTCAAAAAAAGGACATCTGCTGACTGTAACAAGAGATGATTTGGTTGG TCAATATATTGGGCATACAGCCCCAAAGACTAAAGAGGTATTAAAGAAAG CAATGGGTGGGCTTTTATTTATTGATGAAGCTTATTATTTATATAAACCA GACAATGAAAGAGATTATGGTAGTGAGGCAATTGAAATCCTTTTACAAGT AATGGAAAATCAACGGGACGAATTAGTTATTATTTTTGCAGGCTATAAAG AGCGTATGGAACAATTTTATACTTCTAATCCTGGTTTATCCTCACGGATC GCAAACCATGTAGATTTTCCAGATTATTCGTCAGATGAATTACTTATAAT CGCTAAAATGATGTTAGAAGAACAACAATATCAATTTTCTCCAGAAGCAG AGCCAGCCTTTTTAGAGTATATTATGACTCGTCGTGAGCAACCATTGTTT GCAAACGCTCGAAGCATTAGAAATTCATTAGATAGAGCAAGAATGAGACA AGCAAACCGTAATTTTGATAGCGGTGGTCGTATACTTACTAAAGCAGATT TAGTTACCATTACAGATGCAGATATCAAAGCTAGTAGTGTTTTTAGCTTA AATTAATCCACAGATACAATAATTTTTAACAAGATTACCTCAAC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig10:76011..76954+

>mRNA_L-elsbetiae_contig10.41.1 ID=mRNA_L-elsbetiae_contig10.41.1|Name=mRNA_L-elsbetiae_contig10.41.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1368bp|location=Sequence derived from alignment at L-elsbetiae_contig10:76011..76954+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTTTTACTGGGAGTCCTGGGACAGGTAAAACTACTGTGGCAACACG
CATGGCAGATATACTTTTTAAGTTAGGTCACTCAAAAAAAGGACATCTGC
TGACTGTAACAAGAGATGATTTGGTTGGTCAATATATTGGGCATACAGCC
CCAAAGACTAAAGAGGTATTAAAGAAAGCAATGGGTGGGCTTTTATTTAT
TGATGAAGCTTATTATTTATATAAACCAGACAATGAAAGAGATTATGGTA
GTGAGGCAATTGAAATCCTTTTACAAGTAATGGAAAATCAACGGGACGAA
TTAGTTATTATTTTTGCAGGCTATAAAGAGCGTATGGAACAATTTTATAC
TTCTAATCCTGGTTTATCCTCACGGATCGCAAACCATGTAGATTTTCCAG
ATTATTCGTCAGATGAATTACTTATAATCGCTAAAATGATGTTAGAAGAA
CAACAATATCAATTTTCTCCAGAAGCAGAGCCAGCCTTTTTAGAGTATAT
TATGACTCGTCGTGAGCAACCATTGTTTGCAAACGCTCGAAGCATTAGAA
ATTCATTAGATAGAGCAAGAATGAGACAAGCAAACCGTAATTTTGATAGC
GGTGGTCGTATACTTACTAAAGCAGATTTAGTTACCATTACAGATGCAGA
TATCAAAGCTAGTAGTGTTTTTAGCTTAAATTAAATGTCTTTTACTGGGA
GTCCTGGGACAGGTAAAACTACTGTGGCAACACGCATGGCAGATATACTT
TTTAAGTTAGGTCACTCAAAAAAAGGACATCTGCTGACTGTAACAAGAGA
TGATTTGGTTGGTCAATATATTGGGCATACAGCCCCAAAGACTAAAGAGG
TATTAAAGAAAGCAATGGGTGGGCTTTTATTTATTGATGAAGCTTATTAT
TTATATAAACCAGACAATGAAAGAGATTATGGTAGTGAGGCAATTGAAAT
CCTTTTACAAGTAATGGAAAATCAACGGGACGAATTAGTTATTATTTTTG
CAGGCTATAAAGAGCGTATGGAACAATTTTATACTTCTAATCCTGGTTTA
TCCTCACGGATCGCAAACCATGTAGATTTTCCAGATTATTCGTCAGATGA
ATTACTTATAATCGCTAAAATGATGTTAGAAGAACAACAATATCAATTTT
CTCCAGAAGCAGAGCCAGCCTTTTTAGAGTATATTATGACTCGTCGTGAG
CAACCATTGTTTGCAAACGCTCGAAGCATTAGAAATTCATTAGATAGAGC
AAGAATGAGACAAGCAAACCGTAATTTTGATAGCGGTGGTCGTATACTTA
CTAAAGCAGATTTAGTTACCATTACAGATGCAGATATCAAAGCTAGTAGT
GTTTTTAGCTTAAATTAA
back to top