prot_L-elsbetiae_contig1593.4097.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1593.4097.1
Unique Nameprot_L-elsbetiae_contig1593.4097.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length112
Homology
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BLAST of mRNA_L-elsbetiae_contig1593.4097.1 vs. uniprot
Match: A0A6H5JD92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD92_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 5.500e-14
Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = 0 
Query:   41 PVSGATETWACTVGRPSACYDQISESDYKSMVISQQR-MQCTSACLTDGGFWCQAMGIDGCRFCSLDCDEFCS 112
            P SG T T  CT G    CYDQ+ E   K +++ + R + C  +CL DGG WC A+G+ GCRFC+  CD FC+
Sbjct: 1266 PTSGVTFT-ECTPGDSDTCYDQL-EPSMKGLLVERSRGLTCEESCLIDGGLWCDALGLSGCRFCATSCDNFCT 1336
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1593.4097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JD92_9PHAE5.500e-1446.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1593contigL-elsbetiae_contig1593:4572..6902 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1593.4097.1mRNA_L-elsbetiae_contig1593.4097.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1593 4571..6902 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1593.4097.1 ID=prot_L-elsbetiae_contig1593.4097.1|Name=mRNA_L-elsbetiae_contig1593.4097.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp
ECDDHGALWCNIFGKPNCRMCSHDCEAYCLGETDCACHPCPVSGATETWA
CTVGRPSACYDQISESDYKSMVISQQRMQCTSACLTDGGFWCQAMGIDGC
RFCSLDCDEFCS
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