prot_L-elsbetiae_contig1592.4087.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1592.4087.1
Unique Nameprot_L-elsbetiae_contig1592.4087.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length478
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1592.4087.1 vs. uniprot
Match: D7FTS4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS4_ECTSI)

HSP 1 Score: 414 bits (1064), Expect = 3.160e-136
Identity = 264/483 (54.66%), Postives = 321/483 (66.46%), Query Frame = 0 
Query:    1 MEDLANELILDGAVKEAFFSSGDIFFEIARRVEATAATAEAASSAAEDNTACTQDEFDRNVGGAPRWDSWREVFADARLISAAAAVLDAAFFHSLRFPQRVCLVGRPKPSSLPVVADNLFYVYCALRRRMMRQPSGADGAGGIEREKGLDGVYSADDECMTKKGAEEAACPMVAWGKMSRGVLDRIVRALNGISDVISLFNIENESLGLVRNLVGVGIGTDVRAGTQPAASDALKFLIRVNDRTVGLIEDLDRQEKQRRQLEAERLLANGPAAVSPNSEKAGKGRRRSVFARLASLSPGSSRSRRSLTPPLTXXXXXANQPTARGSVVSGDKGGGLQHLLEEGRRGGSEVGGAGKGTSRRRRR-----VGSVPGSDASPRARRGG------PLPPPVVHGV-SQPPPSRQFLGTPPVLLHSYAKLLNSLVCGSYNLRAAYCSSCEADLRNIGREGGYLDMLAGLDGGTPRMIYGQTALFLHEI 471
            M+DLA+E+ILD  VKEAFFS+GDIFFEI+RR+EA AAT  A S+    NTA  +  F R+ G    +D  R V +DARLISA AAVLDAAFFHS++ PQR+ LVGRPKP SLP VA++L +VYCAL RR++      DGA   + + G             ++ AE+A  P+ A   +S GVLDR+VRALNGISDV+SLFNIE+E LG+VRNLVGVG+G  VR G QPAASDAL F++RVNDR V LIEDLDR+E++RRQLE  RLLA GP +VSP SEK  KG++RSVFARL SLSP   R RRS+TPPL+        P   G     D      + + EG  G +    A  G  ++ +       G + G       RRGG      P PP       SQ    R FL + PVLLHSYAKLLN+LVCGSYNLR A+ SSCE D+RNIGREGGYLD+L+ LDGG PR+++ QTALFLHEI
Sbjct:  118 MQDLADEMILDAVVKEAFFSTGDIFFEISRRLEAAAATVAAGSAV---NTAAGEIAF-RHDG----FDGRRAVVSDARLISATAAVLDAAFFHSIQIPQRIDLVGRPKPMSLPAVAEHLVFVYCALCRRIVTNCE--DGADNSDIDTGGRNDLKGFSPAGVERLAEDAMSPLDA---LSTGVLDRVVRALNGISDVVSLFNIEHEHLGIVRNLVGVGLGVKVRVGIQPAASDALAFVVRVNDRAVDLIEDLDRREQERRQLEEARLLALGPVSVSPTSEK-NKGKKRSVFARLGSLSP---RPRRSVTPPLSPPSPAVEPPV--GLPPINDNSDVRTNYILEGGSGSASKTTARAGVPKQEKSDVDNASGGLLGGLVGLEGRRGGGNSVGSPPPPSATQCFESQVSSPRGFLSSAPVLLHSYAKLLNALVCGSYNLREAFFSSCEVDIRNIGREGGYLDVLSRLDGGAPRLVFRQTALFLHEI 581
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1592.4087.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTS4_ECTSI3.160e-13654.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 244..264

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1592contigL-elsbetiae_contig1592:664..2516 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1592.4087.1mRNA_L-elsbetiae_contig1592.4087.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1592 640..2774 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1592.4087.1 ID=prot_L-elsbetiae_contig1592.4087.1|Name=mRNA_L-elsbetiae_contig1592.4087.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=478bp
MEDLANELILDGAVKEAFFSSGDIFFEIARRVEATAATAEAASSAAEDNT
ACTQDEFDRNVGGAPRWDSWREVFADARLISAAAAVLDAAFFHSLRFPQR
VCLVGRPKPSSLPVVADNLFYVYCALRRRMMRQPSGADGAGGIEREKGLD
GVYSADDECMTKKGAEEAACPMVAWGKMSRGVLDRIVRALNGISDVISLF
NIENESLGLVRNLVGVGIGTDVRAGTQPAASDALKFLIRVNDRTVGLIED
LDRQEKQRRQLEAERLLANGPAAVSPNSEKAGKGRRRSVFARLASLSPGS
SRSRRSLTPPLTPPESPANQPTARGSVVSGDKGGGLQHLLEEGRRGGSEV
GGAGKGTSRRRRRVGSVPGSDASPRARRGGPLPPPVVHGVSQPPPSRQFL
GTPPVLLHSYAKLLNSLVCGSYNLRAAYCSSCEADLRNIGREGGYLDMLA
GLDGGTPRMIYGQTALFLHEILVECHL*
back to top