prot_L-elsbetiae_contig1586.4062.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1586.4062.1
Unique Nameprot_L-elsbetiae_contig1586.4062.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1330
Homology
BLAST of mRNA_L-elsbetiae_contig1586.4062.1 vs. uniprot
Match: A0A6H5JPR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPR6_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 1.670e-105
Identity = 204/374 (54.55%), Postives = 241/374 (64.44%), Query Frame = 0
Query:  217 GAGEEEEQEEEFSIPGLGLVHEHWHNGVCLLHRPEYWANGATGGVGEIRRLVCCWGVDVPVGMTKSQLVKQLADASKEGNLPESGCLSYSFELPAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXPEIRVEGGQGGGGVQGGGGSVARDECYKEGQIVWVHGEFAAVMDGKAVSDQ-VWCPGVVCS----------KQKGDDGGPVSPPEAGLVVDVMGQDQAEFPVTEDNIAGFPGSGEHLETVRQSVVEGLGDPPDHMCLAVAQAILACLKCGWDPRRGTNMLRPALCHNQTEGDARVKHYANAWGVEPEKLEELLKFSWVLMKPLPSRATAAGGQEATAM---AESGDGDDEWEHLRATWHKLEGMWRRVEA 576
            GAGEE  + EEFS+PGL LV E WH+GVCLL RP      ++G  GEIRRLV CWGV+V  GMTKSQL  QL  AS+EG LP +GCLSY++ELP  AV                           E+  E       V GGGG    DECY EGQ+VWV G F A MDG+AV D  VWCPGVVC+          +  G  G   SP   GLVVDVMGQ + EF V  DN+ GFPG G++LE  R SV  GLG+PPDHMCLAVAQAILACLKCGWDP RGTN+LRPALC++Q EGDAR+  YA AWGV+P++LEELLK+SW LMKP   ++  A G +A +     E  +G+ EW+HLRATW KLE MWR  ++
Sbjct:  105 GAGEENGEGEEFSVPGLSLVEERWHDGVCLLQRPS-----SSGAEGEIRRLVRCWGVEVLPGMTKSQLSSQLKAASREGLLPLNGCLSYTYELPTLAVEAAAEAAEAAKVKA-------------EVGAEXXXXXXXV-GGGGRKFGDECYNEGQVVWVRGAFVAYMDGQAVEDDDVWCPGVVCAADNSAASSPAETNGGYGAVASP--GGLVVDVMGQSKVEFAVGTDNLTGFPGYGDNLEAFRHSVATGLGNPPDHMCLAVAQAILACLKCGWDPARGTNLLRPALCNDQREGDARLGKYAAAWGVDPDRLEELLKYSWALMKPNAQKSKRADGDQAGSREEEVEEEEGEGEWDHLRATWRKLENMWRGAKS 457          
BLAST of mRNA_L-elsbetiae_contig1586.4062.1 vs. uniprot
Match: D7FJW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW9_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 1.190e-83
Identity = 184/314 (58.60%), Postives = 211/314 (67.20%), Query Frame = 0
Query:  279 MTKSQLVKQLADASKEGNLPESGCLSYSFELPAAAVXXXXXXXXXXXXXXXXXXXXXXXXXXPEIRVEGGQGGGGVQGGGGSVARDECYKEGQIVWVHGEFAAVMDGKAVSDQ-VWCPGVVCS----------KQKGDDGGPVSPPEAGLVVDVMGQDQAEFPVTEDNIAGFPGSGEHLETVRQSVVEGLGDPPDHMCLAVAQAILACLKCGWDPRRGTNMLRPALCHNQTEGDARVKHYANAWGVEPEKLEELLKFSWVLMKPLPSRATAAGGQEATAMAESGDGDD-----EWEHLRATWHKLEGMWRRVEA 576
            MTKSQL  QL  AS+EG LP +GCLSY++ELP  AV   XXXXXXXXXXXXXXXXXXXXXXX               GGGG    D CY EGQ+VWV G F A MDG+AV D  VWCPGVVC+          +  G DG   SP   GLVVDVMGQ + EF V  DN+ GFPG G++LE  R SV  GLG+PPDHMCLAVAQAILACLKCGWDP RGTN+ RPALC+ Q EGDAR+  YA AWGV+P++LEELLK+SW LMKP   ++  A G +A +  E           EW+HLRATW KLE MWR  ++
Sbjct:    1 MTKSQLSSQLKAASREGLLPLNGCLSYTYELPTLAVEAAXXXXXXXXXXXXXXXXXXXXXXX-------------XVGGGGHKFGDACYNEGQVVWVRGAFVAYMDGQAVEDDDVWCPGVVCAAANSAASSPAEANGGDGAVASP--GGLVVDVMGQSKVEFAVGTDNLTGFPGYGDNLEAFRHSVATGLGNPPDHMCLAVAQAILACLKCGWDPARGTNLFRPALCNEQREGDARLGKYATAWGVDPDRLEELLKYSWALMKPNAQKSKKADGDQAGSREEXXXXXXXXXXXEWDHLRATWRKLENMWRGAKS 299          
BLAST of mRNA_L-elsbetiae_contig1586.4062.1 vs. uniprot
Match: D7FJW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW8_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 7.190e-14
Identity = 41/52 (78.85%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    9 SPQSVLDMWREHVRQVVLDSVPESQRKQDVMLELERLQDATKLRSLACKAFE 60
            SPQSVLD+WREHVR +VL+SVPES RK +VMLEL RLQDAT LR+LAC+AFE
Sbjct:  129 SPQSVLDLWREHVRVIVLNSVPESNRKHEVMLELSRLQDATTLRALACQAFE 180          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1586.4062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JPR6_9PHAE1.670e-10554.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJW9_ECTSI1.190e-8358.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FJW8_ECTSI7.190e-1478.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23202:SF27VERPROLIN 1, ISOFORM Gcoord: 60..692
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 60..692

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1586contigL-elsbetiae_contig1586:14606..24468 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1586.4062.1mRNA_L-elsbetiae_contig1586.4062.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1586 12920..24522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1586.4062.1 ID=prot_L-elsbetiae_contig1586.4062.1|Name=mRNA_L-elsbetiae_contig1586.4062.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1330bp
MTLPHRQLSPQSVLDMWREHVRQVVLDSVPESQRKQDVMLELERLQDATK
LRSLACKAFEEAAKAASARQNHNGAVPAAAAAAANNGHNAASVPVSWGVQ
QQQQSTRVSVAPSPPPPQANVGAGYYGAAASNGSGAGHGGGGGGGGGMPG
AVAGTGRAEAAAAAGVAAATSIVSPGAGTVANGISSSNGGVAGQGQPGGR
TVAGGIQPAPGTAPGGGAGEEEEQEEEFSIPGLGLVHEHWHNGVCLLHRP
EYWANGATGGVGEIRRLVCCWGVDVPVGMTKSQLVKQLADASKEGNLPES
GCLSYSFELPAAAVAAAVAAASPAPPAPPAPAPAPPAAPAPEIRVEGGQG
GGGVQGGGGSVARDECYKEGQIVWVHGEFAAVMDGKAVSDQVWCPGVVCS
KQKGDDGGPVSPPEAGLVVDVMGQDQAEFPVTEDNIAGFPGSGEHLETVR
QSVVEGLGDPPDHMCLAVAQAILACLKCGWDPRRGTNMLRPALCHNQTEG
DARVKHYANAWGVEPEKLEELLKFSWVLMKPLPSRATAAGGQEATAMAES
GDGDDEWEHLRATWHKLEGMWRRVEAGRSPPEAQGGTGAGGGASAREVSV
AAAADNGNAAEPAPASGGVDGSGNAAEPAHGSGGAGSNGNATEPPRESGG
ADGNGNAKNGGVGGGQTGIEAEVPPAEVTGESGEPAGGGQQASCLASPPP
PPPPAPSAESAARASAGTGVSSGSPATVSVDAASAGTAVGSNSSATSVRA
DAPPASLSVAEVAVSSSLASLSVNPSPEPMEVDSTIPVVQVDAGAGGAAG
SDSAATKNGGPFSLSEPSMAAAAAAATAAASCPDLRAAPPQAVPPQQANG
IAAAASGAPLPAGAASAPAAPASRATVVASRAQASPTNTVPASGGRIVRP
ADAGKGMTDAPDPKRARIDSGDRGPSTEGGGGAVAGNEGFSSSRPAAAAA
PSALAGVASPAAVSGAPKGGNEAGSGPQAPRAGWLGASFRTPCPPSGSGA
RDGRAGSAASSEAARATVAAKPTLHGAKEASREETAVTTVADPPASSTTT
SAGGAASGPAADPCAVEAGEASQPTAVLGSENSASAAAPPVAAVPASVEA
AEPGAGANSNIVAAGAAATAAGPPASSTTSAGGTTSGSAANPCAEETGQA
SQPAAVLGSNNSTSATAPPVAAAPASVEAAEPGADTHVVAAGAAAPASAA
YTAAPPTTVPAGGGASREEIEEFPAPAPAPAPAPAAAPSPGRPAAGETAV
PTPVSSPPSRPPNSAGGSNGSSGVARPSAAGEPRERTAVAGGDGGGAADG
PPAMGSRFQVPPVFNQADFRKSATTVSAR*
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