mRNA_L-elsbetiae_contig1586.4061.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: A0A6H5JT32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT32_9PHAE) HSP 1 Score: 486 bits (1251), Expect = 2.380e-166 Identity = 227/295 (76.95%), Postives = 259/295 (87.80%), Query Frame = 3 Query: 27 RAACLLSLWVVGGEAVYARSNPGEPPEYCTLFNHMVKSGGSTIKDKLQSSALADGVDGPAMCLNGVGQEQTCLDAMNNSPVIAGYAELLRYPLQGIGRTCDYFTVMRHPIDRLVSAFFYCPTDHDIQDRPAKWCGYVEDPQPVTERLLEFAQQNWKNKAFRQMTFGLYCPPMAFCEQAKVIAPPGAQQAVHEPGGWDLLQQIEAILGTYTAVGILEHWDLSMQLFDERVKSPVSDWQNIQKSNPGQLSGLRDEVYQWAHMSPDIHRTMATDMLLYDYAVSVFKLQTAATLGTVWD 911 R ACLLSL +G +A+YA SNPGEPPEYCTLFNHMVKSGGSTIKDKL +A ADGVDGPAMC+NGVG E +CL AM+++PVI GYAELLRYPL+ IGR C+YFTVMRHPIDRL+SAFFYCP D+QDRP KWCGY DPQPVT+RL+EFA+ WKNKAFRQMTFGLYCPP AFCEQA+ PGAQQAVHEPGGW LL+QIEAIL TYTAVGILE+WDLSMQLF+ RV SPV DW++++ SN GQ SGLRDEV++WAHMSP+IHR MATDMLLYDY+VSVFKLQT+A+LGT+W+ Sbjct: 100 RVACLLSLRAIGCDALYAWSNPGEPPEYCTLFNHMVKSGGSTIKDKLDIAAKADGVDGPAMCVNGVGYEDSCLKAMHSAPVIVGYAELLRYPLEVIGRECEYFTVMRHPIDRLLSAFFYCPAYGDVQDRPPKWCGYANDPQPVTDRLVEFAKYGWKNKAFRQMTFGLYCPPNAFCEQAE----PGAQQAVHEPGGWILLEQIEAILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEVHRWAHMSPEIHRVMATDMLLYDYSVSVFKLQTSASLGTIWE 390
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: D7G5K0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K0_ECTSI) HSP 1 Score: 402 bits (1032), Expect = 5.710e-133 Identity = 184/300 (61.33%), Postives = 232/300 (77.33%), Query Frame = 3 Query: 9 VLRQACRAACLLSLWVVGGEAVYARSNPGEPPEYCTLFNHMVKSGGSTIKDKLQSSALADGVDGPAMCLNGVGQEQTCLDAMNNSPVIAGYAELLRYPLQGIGRTCDYFTVMRHPIDRLVSAFFYCPTDHDIQDRPAKWCGYVEDPQPVTERLLEFAQQNWKNKAFRQMTFGLYCPPMAFCEQAKVIAPPGAQQAVHEPGGWDLLQQIEAILGTYTAVGILEHWDLSMQLFDERVKSPVSDWQNIQKSNPGQLSGLRDEVYQWAHMSPDIHRTMATDMLLYDYAVSVFKLQTAATLGTVW 908 +L R AC+ SL VVG + +YARS PGEPPEYCT+F+HMVKS GST+K L + +G+ PA+C+NG + CL+A+N+S +I GYAEL+RYPL+ R CDYFT++RHPIDRLVSAFFYCPTDHD+Q RP KWCG+ E P P TERLL+FAQ++W+NKAF+QMTFGLYCPP FC++A+V +P Q + EPG D+LQQ++ L YTAVGI+EHWDLSMQLF+ RV+SPV +W ++ NPG +SGLRDEV QWAH SP IHR + TDMLLY +A+S+FK QT A+LGT W Sbjct: 113 MLLDTVRLACVFSLLVVGSDTLYARSEPGEPPEYCTVFHHMVKSAGSTVKSLLHRATRNEGLPRPAVCINGHARTDACLEAINSSAIITGYAELIRYPLEVNRRECDYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHAEHPVPATERLLDFAQESWQNKAFKQMTFGLYCPPDTFCDEAEVESP----QMLDEPGMLDILQQVQNTLAGYTAVGIMEHWDLSMQLFNARVRSPVREWNMFKQRNPGVMSGLRDEVLQWAHESPAIHRVIGTDMLLYYFALSIFKQQTTASLGTNW 408
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE) HSP 1 Score: 373 bits (958), Expect = 2.850e-123 Identity = 181/297 (60.94%), Postives = 220/297 (74.07%), Query Frame = 3 Query: 27 RAACLLSLWVVGGEAVYARSNPGEPPEYCTLFNHMVKSGGSTIKDKLQSSALADGVDGPAMCLNGVGQE-QTCLDAMNNSPVIAGYAELLRY--PLQGIGRTCDYFTVMRHPIDRLVSAFFYCPTDHDIQDRPAKWCGYVEDPQPVTERLLEFAQQNWKNKAFRQMTFGLYCPPMAFCEQAKVIAPPGAQQAVHEPGGWDLLQQIEAILGTYTAVGILEHWDLSMQLFDERVKSPVSDWQNIQKSNPGQLSGLRDEVYQWAHMSPDIHRTMATDMLLYDYAVSVFKLQTAATLGTVW 908 R A +LSL VVG + YARS PG+PPEYCT+F+HMVKSGGSTIK L S+ A G P C+ G G+ +C +A N+S VI GYAEL+R PL+ + R C+YFT++RHP+DRLVSAFFYCPTDHD+Q RP KWCGY +DP P T+RLLEFAQQ+WKN A++QMTFG+YCP CE +V PG + EP G D+LQ++E IL YTAVGI+EHWDLSMQLF+ RV+SPV DW +SN G S LRDEV QWAH SP IHR MATD+LLY +A+S+FK QT +LGT W Sbjct: 13 RLASVLSLLVVGSDTFYARSEPGQPPEYCTVFHHMVKSGGSTIKHNLHISSRAAGGPRPGSCVAGGGKRINSCKEAFNSSAVIMGYAELMRQDGPLEAVRRDCEYFTLLRHPVDRLVSAFFYCPTDHDLQLRPPKWCGYADDPLPATDRLLEFAQQHWKNMAYKQMTFGMYCPHGLICEATEVETAPG----LDEPHGLDVLQKVEDILSGYTAVGIMEHWDLSMQLFNARVRSPVRDWNMTVRSNAGLPSELRDEVLQWAHDSPVIHRLMATDLLLYSFALSIFKRQTTESLGTNW 305
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: A0A6H5L5I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5I1_9PHAE) HSP 1 Score: 352 bits (904), Expect = 3.940e-115 Identity = 167/293 (57.00%), Postives = 211/293 (72.01%), Query Frame = 3 Query: 39 LLSLWVVGGEAVYARSNPGEPPEYCTLFNHMVKSGGSTIKDKLQSSALADGVDGPAMCLNGVGQE-QTCLDAMNNSPVIAGYAELLRY--PLQGIGRTCDYFTVMRHPIDRLVSAFFYCPTDHDIQDRPAKWCGYVEDPQPVTERLLEFAQQNWKNKAFRQMTFGLYCPPMAFCEQAKVIAPPGAQQAVHEPGGWDLLQQIEAILGTYTAVGILEHWDLSMQLFDERVKSPVSDWQNIQKSNPGQLSGLRDEVYQWAHMSPDIHRTMATDMLLYDYAVSVFKLQTAATLGTVW 908 +LSL VVG +A YARS PG+PPEYCT+F+HMVKSGGSTI + G P +C+ G G++ +C +A N+S VI GYAE +R PL+ + + C+YFT++RHP+DRLVSAFFYCP +HD+Q RP KWCGY + P P T+RLL++AQQ WKN A++QM FG+YCP CE +V PG + EP G D+LQ++E IL YTAVGI+EHWDLSMQLF+ RV+SPV +W Q SN G S LRDEV QWAH SP +HR +ATDMLLY +A+S+FK QT LGT W Sbjct: 17 VLSLLVVGSDAFYARSEPGQPPEYCTVFHHMVKSGGSTIXXXXXXXXXSAGDPRPGLCVAGGGEKTNSCKEAFNSSAVIMGYAEAMRQDVPLEAVRKDCEYFTLLRHPVDRLVSAFFYCPKEHDVQSRPPKWCGYADHPLPATDRLLDYAQQYWKNMAYKQMAFGMYCPHGLICEATEVRTAPG----LDEPHGLDVLQKVEDILSRYTAVGIMEHWDLSMQLFNARVRSPVREWNITQHSNAGLPSELRDEVLQWAHDSPVVHRLIATDMLLYSFALSIFKRQTTEALGTNW 305
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: A0A6H5K0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0M4_9PHAE) HSP 1 Score: 312 bits (799), Expect = 3.660e-100 Identity = 144/241 (59.75%), Postives = 184/241 (76.35%), Query Frame = 3 Query: 192 VDGPAMCLNGVGQEQTCLDAMNNSPVIAGYAELLR--YPLQGIGRTCDYFTVMRHPIDRLVSAFFYCPTDHDIQDRPAKWCGYVEDPQPVTERLLEFAQQNWKNKAFRQMTFGLYCPPMAFCEQAKVIAPPGAQQAVHEPGGWDLLQQIEAILGTYTAVGILEHWDLSMQLFDERVKSPVSDWQNIQKSNPGQLSGLRDEVYQWAHMSPDIHRTMATDMLLYDYAVSVFKLQTAATLGTVW 908 V +C+N + CL+A+N+S +I GYAEL+R YPL+ R C YFT++RHPIDRLVSAFFYCPTDHD+Q RP KWCG+ E P P TERLL+FAQ++W+N+AF+QMTFGLYCPP FCE+A+V +P Q + EPG D+LQQ++ IL YTAVGI+EHWDLS+QLF+ RV+SPV +W ++ NPG ++ LRDEV QWAH SP IHR + TDMLLY + +S+FK QT A+LGT W Sbjct: 17 VKADTVCINEQDRTNACLEAINSSAIITGYAELIRRVYPLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEEAEVDSP----QMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSIQLFNARVRSPVREWNVSKQRNPGVMTRLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 253
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: D8LHT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHT4_ECTSI) HSP 1 Score: 306 bits (785), Expect = 2.670e-97 Identity = 145/284 (51.06%), Postives = 193/284 (67.96%), Query Frame = 3 Query: 60 GGEAVYARSNPG-EPPEYCTLFNHMVKSGGSTIKDKLQSSALADGVDGPAMCLNGVGQEQTCLDAMNNSPVIAGYAELLRYPLQGIGRTCDYFTVMRHPIDRLVSAFFYCPTDHDIQDRPAKWCGYVEDPQPVTERLLEFAQQNWKNKAFRQMTFGLYCPPMAFCEQAKVIAPPGAQQAVHEPGGWDLLQQIEAILGTYTAVGILEHWDLSMQLFDERVKSPVSDWQNIQKSNPGQLSGLRDEVYQWAHMSPDIHRTMATDMLLYDYAVSVFKLQTAATLGTVW 908 G +A+Y R++ +PP YCT+F+HMVK+GG+ ++D+L ++ G D P +C+ G + CLDA+++S VI GY ELLR P++ +GR CDYFT+MRHPIDRLVSAF+YCPT HD Q RP KWCG P P+T RLL+FA+++W KA Q++F YCPP AFCE V PP V + W LL E +L +YTAVGI E W+LSM+LFD + SPV W + NPG S R+ + +WAH SP+I + + D+LLYD A+S+FK QTA LGTVW Sbjct: 11 GCQAIYTRASMDTDPPTYCTMFHHMVKNGGTAVRDQLILASEIQGRDVPGLCVIGPSSAEACLDALHHSSVIMGYVELLRDPMEELGRRCDYFTMMRHPIDRLVSAFYYCPTFHDKQVRPNKWCGGHSHPDPLTSRLLDFAREDWMCKAMFQLSFASYCPPGAFCEHDMVEEPPTHLNGVED---WSLLAVAEDVLLSYTAVGIFEEWELSMELFDAVISSPVQQWGGEEAVNPGPKSSEREMLLRWAHSSPEIRQAVGGDLLLYDLALSIFKRQTAEALGTVW 291
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: A0A6H5JUF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUF0_9PHAE) HSP 1 Score: 283 bits (724), Expect = 2.630e-89 Identity = 132/225 (58.67%), Postives = 162/225 (72.00%), Query Frame = 3 Query: 288 LLRYPLQGIGRTCDYFTVMRHPIDRLVSAFFYCPTDHDIQDRPAKWCGYVEDPQPVTERLLEFAQQNWKNKAFRQMTFGLYCPPMAFCEQAKV------------------IAPPGAQQAVHEPGGWDLLQQIEAILGTYTAVGILEHWDLSMQLFDERVKSPVSDWQNIQKSNPGQLSGLRDEVYQWAHMSPDIHRTMATDMLLYDYAVSVFKLQTAATLGTVW 908 L YPL+ R C YFT++RHPIDRLVSAFFYCPTDHD+Q RP KWCG+ E P P TERLL+FAQ++W+N+AF+QMTFGLYCPP FCE A+V + G Q + EPG D+LQQ++ IL YTAVGI+EHWDLSMQLF+ RV+SPV +W ++ NPG ++GLRDEV QWAH SP IHR + TDMLLY + +S+FK QT A+LGT W Sbjct: 2 LCAYPLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEVAEVNNVSQCETFVVGVGSLDGLREVGPPQMLDEPGILDVLQQVQDILAGYTAVGIMEHWDLSMQLFNARVRSPVREWNVFKQRNPGVMTGLRDEVLQWAHKSPAIHRVIGTDMLLYSFGLSIFKQQTTASLGTNW 226
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: D7FJX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX1_ECTSI) HSP 1 Score: 207 bits (526), Expect = 4.080e-61 Identity = 98/149 (65.77%), Postives = 109/149 (73.15%), Query Frame = 3 Query: 342 MRHPIDRLVSAFFYCPTDHDIQDRPAKWCGYVEDPQPVTERLLEFAQQNWKNKAFRQMTFGLYCPPMAFCEQAKVIAPPGAQQAVHEPGGWDLLQQIEAILGTYTAVGILEHWDLSMQLFDERVKSPVSDWQNIQKSNPGQLSGLRDEV 788 MRHPIDRL+SAFFYCP D D+QDRP KWCGY DPQPVT+RL+EFA+ WKNKAFRQMTFGLYCPP AFCEQA E IL TYTAVGILE+WDLSMQLF+ RV SPV DW++++ SN GQ SGLRDEV Sbjct: 1 MRHPIDRLLSAFFYCPADGDVQDRPTKWCGYANDPQPVTDRLVEFAEYGWKNKAFRQMTFGLYCPPNAFCEQA------------------------EGILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEV 125
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: A0A6H5JQY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY1_9PHAE) HSP 1 Score: 182 bits (463), Expect = 1.120e-51 Identity = 80/127 (62.99%), Postives = 101/127 (79.53%), Query Frame = 3 Query: 192 VDGPAMCLNGVGQEQTCLDAMNNSPVIAGYAELLR--YPLQGIGRTCDYFTVMRHPIDRLVSAFFYCPTDHDIQDRPAKWCGYVEDPQPVTERLLEFAQQNWKNKAFRQMTFGLYCPPMAFCEQAKV 566 V +C+NG + CL+A+N+S +I GYAEL+R YPL+ R C+YFT++RHPIDRLVSAFFYCPTDHD+Q RP KWCG+ E P P TERLL+FAQ++W+N AF+QMTFGLYCPP FCE+A+V Sbjct: 17 VKADTVCINGHDRTNACLEAINSSAIITGYAELIRRVYPLEVERRECEYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGHEEHPVPATERLLDFAQESWQNMAFKQMTFGLYCPPDTFCEEAEV 143
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Match: D7FUF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF7_ECTSI) HSP 1 Score: 180 bits (456), Expect = 7.800e-51 Identity = 83/140 (59.29%), Postives = 103/140 (73.57%), Query Frame = 3 Query: 489 WKNKAFRQMTFGLYCPPMAFCEQAKVIAPPGAQQAVHEPGGWDLLQQIEAILGTYTAVGILEHWDLSMQLFDERVKSPVSDWQNIQKSNPGQLSGLRDEVYQWAHMSPDIHRTMATDMLLYDYAVSVFKLQTAATLGTVW 908 W+N AF+QMT+GLYCPP A C + ++ AP Q V EPGG DLLQQ+E IL Y AVGI+EHW LSM+LF+ RV+SPV +W ++ NPG SGLRD+V QWAH +P IHR + DMLLY +A+S+FK QTA LGT W Sbjct: 2 WQNLAFKQMTYGLYCPPEAICGEMQLDAP----QMVDEPGGLDLLQQVEDILAGYAAVGIMEHWGLSMELFNARVRSPVREWNRFKQKNPGVTSGLRDQVLQWAHENPAIHRVLGADMLLYSFALSIFKQQTAEALGTNW 137 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1586.4061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1586.4061.1 >prot_L-elsbetiae_contig1586.4061.1 ID=prot_L-elsbetiae_contig1586.4061.1|Name=mRNA_L-elsbetiae_contig1586.4061.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=263bp MVKSGGSTIKDKLQSSALADGVDGPAMCLNGVGQEQTCLDAMNNSPVIAGback to top mRNA from alignment at L-elsbetiae_contig1586:2978..11434+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1586.4061.1 ID=mRNA_L-elsbetiae_contig1586.4061.1|Name=mRNA_L-elsbetiae_contig1586.4061.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8457bp|location=Sequence derived from alignment at L-elsbetiae_contig1586:2978..11434+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1586:2978..11434+ >mRNA_L-elsbetiae_contig1586.4061.1 ID=mRNA_L-elsbetiae_contig1586.4061.1|Name=mRNA_L-elsbetiae_contig1586.4061.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1578bp|location=Sequence derived from alignment at L-elsbetiae_contig1586:2978..11434+ (Laminarionema elsbetiae ELsaHSoW15)back to top |