prot_L-elsbetiae_contig1580.4042.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: D8LSD4_ECTSI (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSD4_ECTSI) HSP 1 Score: 149 bits (377), Expect = 3.100e-43 Identity = 71/90 (78.89%), Postives = 78/90 (86.67%), Query Frame = 0 Query: 8 RDLRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQDVEGPDMADFDVVLCFEARVFYSVVEGINS 97 R++RLPGKDIASPEVFPFGTPYRDI D LK KDEA F +NNLL L ARN+ +KAAPQRFQ++EGPDMADFDVVLCFE RVFY VVEG S Sbjct: 138 REVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEGTCS 227
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: A0A6H5KZG9_9PHAE (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG9_9PHAE) HSP 1 Score: 149 bits (376), Expect = 2.150e-41 Identity = 70/90 (77.78%), Postives = 78/90 (86.67%), Query Frame = 0 Query: 8 RDLRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQDVEGPDMADFDVVLCFEARVFYSVVEGINS 97 R++RLPGKDIASPEVFPFGTPYRDI D LK KDEA F +NNLL L ARN+ +KAAPQRFQ++EGPDMADFDVVLCFE RVFY VVE + S Sbjct: 234 REVRLPGKDIASPEVFPFGTPYRDIFDKLKAKDEALFSQNNLLPLVARNAMVKAAPQRFQEIEGPDMADFDVVLCFETRVFYLVVEDLQS 323
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: A0A6H5JLZ3_9PHAE (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLZ3_9PHAE) HSP 1 Score: 106 bits (264), Expect = 8.800e-27 Identity = 50/89 (56.18%), Postives = 67/89 (75.28%), Query Frame = 0 Query: 8 RDLRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQDVEGPDMADFDVVLCFEARVFYSVVEGIN 96 R++RLPGKD SP+ FPFGTPY +I D L R++EA F RN++L L RN+T K AP+R+Q ++G +A FDVV+CFE+RVF VVE + Sbjct: 20 REVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGGHVASFDVVVCFESRVFDLVVEDLQ 108
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: D8LTB5_ECTSI (Protein-serine/threonine phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTB5_ECTSI) HSP 1 Score: 109 bits (273), Expect = 3.150e-26 Identity = 52/88 (59.09%), Postives = 68/88 (77.27%), Query Frame = 0 Query: 8 RDLRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQDVEGPDMADFDVVLCFEARVFYSVVEGI 95 R++RLPGKD SP+ FPFGTPY +I D L R++EA F RN++L L RN+T K AP+R+Q ++G +A FDVV+CFE+RVF VVEGI Sbjct: 176 REVRLPGKDSKSPQSFPFGTPYVEIRDFLARQNEALFRRNSVLGLLERNATTKRAPERWQSLDGEHVASFDVVVCFESRVFDLVVEGI 263
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: J3N6B8_ORYBR (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=2 Tax=Oryza TaxID=4527 RepID=J3N6B8_ORYBR) HSP 1 Score: 97.8 bits (242), Expect = 1.600e-23 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 0 Query: 1 VSFLVVSRDLRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQDVEGPDMADFDVVLCFEARVFYSVVEGINS 97 V+F ++LPG + P ++PFGTPY+ IHD L+RKD + RN LL + RNS +KA PQR+QD G FDVVL FE +VF SV+E +NS Sbjct: 36 VAFYGTGAHVKLPGPSLLDPNLYPFGTPYKAIHDDLRRKDPDLYKRNGLLPMLKRNSAVKATPQRWQDNAGD--GPFDVVLTFEEKVFDSVLEDLNS 130
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: UPI00077618CA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like n=1 Tax=Oryza brachyantha TaxID=4533 RepID=UPI00077618CA) HSP 1 Score: 97.8 bits (242), Expect = 1.720e-23 Identity = 48/97 (49.48%), Postives = 63/97 (64.95%), Query Frame = 0 Query: 1 VSFLVVSRDLRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQDVEGPDMADFDVVLCFEARVFYSVVEGINS 97 V+F ++LPG + P ++PFGTPY+ IHD L+RKD + RN LL + RNS +KA PQR+QD G FDVVL FE +VF SV+E +NS Sbjct: 36 VAFYGTGAHVKLPGPSLLDPNLYPFGTPYKAIHDDLRRKDPDLYKRNGLLPMLKRNSAVKATPQRWQDNAGD--GPFDVVLTFEEKVFDSVLEDLNS 130
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: A0A8J6BIY5_ZIZPA (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J6BIY5_ZIZPA) HSP 1 Score: 94.0 bits (232), Expect = 9.060e-22 Identity = 49/97 (50.52%), Postives = 61/97 (62.89%), Query Frame = 0 Query: 1 VSFLVVSRDLRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQDVEGPDMADFDVVLCFEARVFYSVVEGINS 97 VS ++LPG I P V+ FGTPY+ IHD L+RKD + RN LL + RNST+KA PQR+Q+ G FDVVL FE +VF VVE +NS Sbjct: 34 VSSYGTGAHVKLPGPSIHEPNVYAFGTPYKTIHDDLRRKDPDLYKRNGLLPMLKRNSTVKAVPQRWQENAGD--GPFDVVLTFEEKVFDLVVEDLNS 128
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: UPI001FB17BB1 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB17BB1) HSP 1 Score: 89.4 bits (220), Expect = 5.160e-20 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 0 Query: 10 LRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQD--VEGPDMADFDVVLCFEARVFYSVVEGINS 97 ++LPG + P V+ FGTPY+ + D L+RKD + RN +L + RNST+K APQR+QD +GP FDVVL FE +VF +V+E +N+ Sbjct: 39 VKLPGPSLREPNVYDFGTPYKQMFDDLRRKDSELYKRNGILPMLKRNSTVKLAPQRWQDNAADGP----FDVVLTFEEKVFDNVIEDMNN 124
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: UPI00053A3199 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI00053A3199) HSP 1 Score: 88.2 bits (217), Expect = 9.160e-20 Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0 Query: 10 LRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQDVEGPDMADFDVVLCFEARVFYSVVEGIN----SCTTFTSCF 105 ++LPG + P V+ FGTPY+ + D L+RKD + RN +L++ RN ++K APQR+QD G + FDVV+ FE +VF SV+EG S T F +CF Sbjct: 39 VKLPGPSLREPNVYDFGTPYKQMFDELRRKDPELYKRNGILQMLKRNLSVKLAPQRWQDNAGDGV--FDVVMTFEEKVFDSVLEGNTTSSLSDTLFQNCF 136
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Match: UPI000539A3F4 (RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000539A3F4) HSP 1 Score: 87.0 bits (214), Expect = 1.330e-19 Identity = 43/93 (46.24%), Postives = 61/93 (65.59%), Query Frame = 0 Query: 10 LRLPGKDIASPEVFPFGTPYRDIHDTLKRKDEAFFLRNNLLKLAARNSTIKAAPQRFQDVEGPDMADFDVVLCFEARVFYSVVEGINSCTTFT 102 ++LPG + P V+ FGTPY+ + D L+RKD + RN +L++ RN ++K APQR+QD G + FDVV+ FE +VF SV+EGI FT Sbjct: 39 VKLPGPSLREPNVYDFGTPYKQMFDELRRKDPELYKRNGILQMLKRNLSVKLAPQRWQDNAGDGV--FDVVMTFEEKVFDSVLEGILHPPHFT 129 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1580.4042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-elsbetiae_contig1580.4042.1 ID=prot_L-elsbetiae_contig1580.4042.1|Name=mRNA_L-elsbetiae_contig1580.4042.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=108bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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