mRNA_L-elsbetiae_contig158.4037.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: D8LTY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY5_ECTSI) HSP 1 Score: 419 bits (1076), Expect = 9.950e-134 Identity = 334/732 (45.63%), Postives = 382/732 (52.19%), Query Frame = 1 Query: 19 WTLGEETALSISLENEAGVRVRHPHGHHVWT--QPESAAARDGLATG-VPLGVALEGERADRFRLDVTSCAGT-DGCGGGGFRR-------------ASNKGLILDLSTGTADGKVTILPATKPL-PVEPPAPSHDATADKEEERGEGRGIMTVCPPSPAGRTRRRPQAPEKIGRELEDEDGGGRRSAEE---EGGEVYLSIWIRASWSERFNRPVLPLESLSAPVFSPP------AAPPPTAAIAPATTDRASEGTGGSTRVPTCSASRPAVTRKGACSVRRLRFEARGGHDNGDGDAGWLERARGAERKQRNGSATATDTVAATAAATD-----AIATEHSARCDSSHAAEAKQSCGETTPAKAPPPPIPMTALSXXXXXXXXXXXXXLPSAAVATAAAKGERDVGDRVPTSCHSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEICAAESVSLGGFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDEKDLLPLLTSNLERNKCRGDLRNVNACAYDWGSPIQNYPLLARG-GFDVVICSDLLYDPVGWGPLLASLRQLVRGSAS-----ATGGGGGE---EPT-------VYLAHRTRNAQERDFFAMLLRQ--GEXXXXXXXXXXXXXDGA--GVSSWSCRGLSGRXXXXXXXXXXXXXXXXXXKKECRGGEGPLWRRGCFPDVALYELSPIRA 2058 WTLGE A++++LE+EAGVRV+HPH +HVW QP S++ARDGLATG VPL V LEGERA RF LDV+S DG GGGG R A KGL LDLSTGTA G V +LP+++P P PP H+ + + CP A E+ G + EE G EV LSI + +W+ RFNRPVLPLESL A V SPP A P A P T EG R + R GAC+VRRLRFE GD D G R E+++ N + T A A D A A +H C CG PPPP P T + L S+ V AA D GD + S XXXXXXXXXXXXXXX IE+CAAES SLGGFFGTVWDCSL+MGAFLA LGP +L GKRVVELGA G +SALCAALGASEVVATD KDLLPLLT NL RN C G L NV AC YDWGSP+ ++P L+RG GFDVVICSDLLYDP GW PLL SLRQL+ + A G G PT VYLAHRTRN QE +FF LL Q G +G GV S+ CR LS + CRGGEG +WR GCFPDVALYELSP+ A Sbjct: 37 WTLGEPVAVTVALESEAGVRVQHPHSYHVWAEPQPSSSSARDGLATGAVPLRVTLEGERASRFLLDVSSSIEEGDGVGGGGADRHDDSSHADQGRQCAPFKGLTLDLSTGTAHGWVAVLPSSRPTEPRTPPDLDHEDSTP-----------VCACPAVAAQXXXXXXXXXXXXX--XXGEENGCKPEGEEGVVAGAEVQLSISLSPAWARRFNRPVLPLESLPALVHSPPYHVAAVGATPTVATPTPPTGRLEGEGQ-----------KRAVIGRSGACNVRRLRFEVGVARGGGDRDTG-RRTIREEEKREENSGSKFTANEAEGATVEDSHLAGAPARKHKGDC-----------CGGPINISLPPPPSPPTTPASSWPS--------LSSSPVGNAATVSGSD-GDGATSGLSSCXXXXXXXXXXXXXXXXERGNGI---------------IEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPASLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNSCPGSL-NVEACEYDWGSPVGHHPALSRGVGFDVVICSDLLYDPAGWEPLLESLRQLLAAAGGRQRQPARGRGAXXXXXSPTPPSAPAVVYLAHRTRNPQESEFFDALLGQEGGRGPAAEASRRGGPPEGGEEGVLSFRCRRLS------------EEGVGGCHDEGCRGGEGLVWRGGCFPDVALYELSPVFA 695
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: A0A6H5JS56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS56_9PHAE) HSP 1 Score: 368 bits (945), Expect = 1.060e-114 Identity = 317/734 (43.19%), Postives = 368/734 (50.14%), Query Frame = 1 Query: 73 VRVRHPHGHHVWTQPE--SAAARDGLATGV-PLGVALEGERADRFRLDVTS------CAGTDG-CG--GGGFRR-------------ASNKGLILDLSTGTADGKVTILPATKPL-PVEPPAPSHDATADKEEERGEGRGIMTVCPPSPAGRTRRRPQAP-------EKIGRELEDEDGGGRRSAEEEGGEVYLSIWIRASWSERFNRPVLPLESLSAPVFSPP------AAPPPTAAIAPATTDRASEGTGGSTRVPTCSASRPAVTRKGACSVRRLRFEARGGHDNGDGDAGWLERARGAERKQRNGSATATDTVAATAAATDAIATEHSARCDSSHAAEAKQS------CGETTPAKAPPPPIPMTALSXXXXXXXXXXXXXLPSAAVATAAAKG--ERDVGDRVPTSCHSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEICAAESVSLGGFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDEKDLLPLLTSNLERNKCRGDLRNVNACAYDWGSPIQNYPLLARGG-FDVVICSDLLYDPVGWGPLLASLRQLVRGSASATGGGGGEEPT--------------------VYLAHRTRNAQERDFFAMLLRQ--GEXXXXXXXXXXXXXDGA--GVSSWSCRGLSGRXXXXXXXXXXXXXXXXXXKKECRGGEGPLWRRGCFPDVALYELSPIRA 2058 + + HPH HHVW +PE S++A DGLA GV PL V LEGERA+RF LDV+S C G G CG GGG R A +KGL LDLSTG A G V +LPA++P P PP HD + + CP A E+ G E E EDG G EV LSI + +W RFNRPVLPLESL A V P A P A P T EG R + R+ AC+VRRLRFE GD D G R++++GS + A + SH AEA C PPPP P + L S+ V A A E D +SC + XXXXXXXXXXXXXXXXXXXX +E+CAAES SLGGFFGTVWDCSL+MGAFLA LGPG+L GKRVVELGA G +SALCAALGASEVVATD KDLLPLLT NL RN C G + NV AC YDWGSP+ ++ L++GG FDVV+CSDLLYDP GW PLL SLRQL+ A G +PT VYLAHRTRN QE +FF +LL Q G +G GV S+ CR LS + CRGGEG +WR GCFPD+ALYELSP+ A Sbjct: 1 MNIPHPHSHHVWAEPEPSSSSAHDGLAAGVVPLRVTLEGERANRFLLDVSSSIEEGECVGAGGSCGEAGGGADRHVDSSHADQGRQCAPSKGLTLDLSTGMAHGWVAVLPASRPTEPRTPPDLDHDDSTP-----------VCACPAVAAXXXXXXXXXXXXXXXXGEENGCEPEGEDG------VVAGAEVQLSISLSPAWVRRFNRPVLPLESLPAFVHDPAYHVAAVGATPTVATPTPPTGRLEGEGQ-----------RRAVIGRRDACNVRRLRFEVGVARGGGDRDTGRRTPGEEERREEKSGSKFTPNEA-------------EGATVEDSHLAEAPSRKHKGGYCRGPRNTSLPPPPSPPATPAWSRPS--------LSSSPVGNAPAMSGSEWDGATGGLSSCSAXXXXXXXXXXXXXXXXXXXXXXNDDKHGNKI-------VEVCAAESASLGGFFGTVWDCSLKMGAFLAALGPGSLEGKRVVELGAATGTLSALCAALGASEVVATDTKDLLPLLTFNLARNSCPGSV-NVEACEYDWGSPVGHHLALSQGGGFDVVLCSDLLYDPAGWEPLLESLRQLL-----AAAGERQRQPTRRXXXXXXXXXXXXXXXXAVVYLAHRTRNPQESEFFDVLLGQEGGRGPAAEASQRGGPREGCEEGVLSFRCRRLSDEWVGGCHD------------EGCRGGEGLVWRGGCFPDIALYELSPVFA 660
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: A0A1V9ZB44_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZB44_9STRA) HSP 1 Score: 102 bits (254), Expect = 3.030e-19 Identity = 70/174 (40.23%), Postives = 100/174 (57.47%), Query Frame = 1 Query: 1294 ICAAESVSLGGFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDEKDLLPLLTSNLERNKCRGDLRNV-NACAYDWGSPIQNYPLLARGGFDVVICSDLLYDPVGWGPLLASLRQLVRGSASATGGGGGEEPTVYLAHRTRNAQERDFFAML 1812 I AES G G +WD +L + +LA P L GKRV+E+G+G G V +CA LGA+ V TD +D++ +L N+ N DL +V +A A WGS + + FDVV+ SD++YDP G+ PL+ SL + S AT T+ +AHR+R+ QE+DFF +L Sbjct: 304 ITLAESPGHLGIAGKLWDSALILTTYLARY-PTLLAGKRVLEVGSGLGLVGMVCALLGAASVTLTDMEDVVAMLKYNIALN----DLDSVAHARALAWGSAVDHLD----APFDVVVMSDVVYDPTGYAPLVQSLLDV---STPAT--------TMLMAHRSRHPQEKDFFDLL 457
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: A0A485LH46_9STRA (Aste57867_21306 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LH46_9STRA) HSP 1 Score: 104 bits (259), Expect = 3.870e-19 Identity = 68/170 (40.00%), Postives = 92/170 (54.12%), Query Frame = 1 Query: 1303 AESVSLGGFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDEKDLLPLLTSNLERNKCRGDLRNVNACAYDWGSPIQNYPLLARGGFDVVICSDLLYDPVGWGPLLASLRQLVRGSASATGGGGGEEPTVYLAHRTRNAQERDFFAML 1812 AES G G +WD SL + A+LA P + G+RV+ELG+G G V CA L + VV TD D++PLL N+E N C WG+ + R FDVV+ SD++YDP G+ PL+ SLR+L E T+ + HR+R+ QE+DFF ML Sbjct: 305 AESPGNLGIGGKLWDSSLILTAYLAAH-PTIVTGRRVIELGSGLGLVGLACACLDVASVVLTDMDDVVPLLAYNIELNGLGARAHVQPLC---WGTSAAHL----RPPFDVVLLSDVVYDPHGYKPLINSLRELAT-----------PETTILMGHRSRHPQEKDFFDML 455
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: A0A1V9ZX02_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZX02_9STRA) HSP 1 Score: 101 bits (251), Expect = 6.930e-19 Identity = 65/173 (37.57%), Postives = 95/173 (54.91%), Query Frame = 1 Query: 1294 ICAAESVSLGGFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDEKDLLPLLTSNLERNKCRGDLRNVNACAYDWGSPIQNYPLLARGGFDVVICSDLLYDPVGWGPLLASLRQLVRGSASATGGGGGEEPTVYLAHRTRNAQERDFFAML 1812 I AES G G +WD +L + +LA P L+ KRV+E+G+G G V +CA LGA V TD +++P+L N+ N + +N A A WGSP + FDVV+ SD++YDP G+ PL+ S+ + S + T + +AHR+R+ QE+DFF L Sbjct: 299 ITLAESPGHLGIAGKLWDSALILTTYLA-RNPHLLKSKRVLEVGSGLGLVGMVCAFLGAKSVTLTDMDEVVPMLNYNIRLNNLQ---KNAVAKALCWGSPADHL----EPPFDVVVMSDVVYDPTGYSPLVQSILDV---SVNTT--------KILMAHRSRHPQEKDFFDQL 452
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: T0S637_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S637_SAPDV) HSP 1 Score: 101 bits (251), Expect = 7.380e-19 Identity = 65/173 (37.57%), Postives = 94/173 (54.34%), Query Frame = 1 Query: 1294 ICAAESVSLGGFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDEKDLLPLLTSNLERNKCRGDLRNVNACAYDWGSPIQNYPLLARGGFDVVICSDLLYDPVGWGPLLASLRQLVRGSASATGGGGGEEPTVYLAHRTRNAQERDFFAML 1812 I AES G G +WD +L + +LA P L GKRV+E+G+G G V +CA LGA+ V TD +++P+L NL+ N +A A WG+ P FDVV+ SD++YDP G+ PL+ +L + S T+ +AHR+R+ QE+DFF +L Sbjct: 306 ITLAESPGHLGIAGKLWDSALILTTYLA-RNPQVLAGKRVLEVGSGLGLVGMVCAHLGAAAVTLTDMDEVVPMLQYNLKLNALEAV---ASASALCWGTS----PAHLSPPFDVVVMSDVVYDPTGYAPLVTTLLDVTTPST-----------TILMAHRSRHPQEKDFFELL 459
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: A0A6G0XVS3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVS3_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 9.410e-18 Identity = 67/174 (38.51%), Postives = 97/174 (55.75%), Query Frame = 1 Query: 1294 ICAAESVSLGGFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDEKDLLPLLTSNLERNKCRGDLRN-VNACAYDWGSPIQNYPLLARGGFDVVICSDLLYDPVGWGPLLASLRQLVRGSASATGGGGGEEPTVYLAHRTRNAQERDFFAML 1812 I AES G G +WD SL + A+LA P +R +R +ELG+G G V CA LG V+ TD D+ PLL N+ N DL++ V A WG+ ++ + FDVV+ SD++YDP G+ PL+ SL+ L S +T T+ + HR+R+ QE++FF +L Sbjct: 300 ITLAESPGNLGIGGKLWDSSLILTAYLAAH-PDIVRHRRAIELGSGIGLVGMSCAYLGVKTVILTDIDDVAPLLAYNVRLN----DLQDQVAVQALWWGTSVE----MLEPPFDVVLMSDVVYDPTGYEPLVQSLKDL---STPST--------TILMGHRSRHPQEKEFFNLL 453
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: W4H5B2_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H5B2_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.440e-17 Identity = 68/174 (39.08%), Postives = 95/174 (54.60%), Query Frame = 1 Query: 1294 ICAAESVSLGGFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALGA-SEVVATDEKDLLPLLTSNLERNKCRGDLRNVNACAYDWGSPIQNYPLLARGGFDVVICSDLLYDPVGWGPLLASLRQLVRGSASATGGGGGEEPTVYLAHRTRNAQERDFFAML 1812 I AES G G +WD SL + A+LA P + GK V+ELG+G G V CA+L A + VV TD D++PLL N+ N D +V WG+ I++ L +DVV+ SD++YDP G+ PL+ASLR L + T+ + HR+R+ QE+ FF L Sbjct: 311 ITLAESPGNLGIGGKLWDSSLILTAYLAAH-PAVVSGKHVIELGSGLGLVGLACASLPAVASVVLTDIDDVVPLLEYNVRLNDL-SDKASVKPLW--WGTSIEH---LFNAPYDVVLLSDVVYDPFGYKPLVASLRDLTS-----------PDTTILMGHRSRHPQEKQFFDSL 466
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: A0A2D4C1C6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1C6_PYTIN) HSP 1 Score: 94.4 bits (233), Expect = 1.510e-16 Identity = 63/177 (35.59%), Postives = 93/177 (52.54%), Query Frame = 1 Query: 1291 EICAAESVSLGGFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALGASEVVATDEKDLLPLLTSNLERNKCRGDLRNVNACAYDWGSPIQNYPLLARGGFDVVICSDLLYDPVGWGPLLASLRQLVRGSASATGGGGGEEPTVYLAHRTRNAQERDFFAMLLRQ 1821 EI AES G G +WD L + +L P L+G+ V+ELG+G G V CA LGA V TD ++++PLL N+ N + A A+ WG+ + + DV++ SD++YDP G+ PL+ SL L + A+ T+ +AHR+RN E FF +L +Q Sbjct: 335 EILLAESPGNLGIGGKLWDSCLVLTRYLR-THPELLQGRHVIELGSGLGLVGIYCAMLGA-HVTLTDMEEVIPLLDYNIRLNFKDSTAQMPRAVAHMWGTSTERLGVTP----DVIVMSDVVYDPEGYAPLVTSLTALAKTPAT----------TILMAHRSRNPMEGQFFDLLGQQ 495
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Match: A0A024UIR6_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UIR6_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.610e-16 Identity = 61/164 (37.20%), Postives = 90/164 (54.88%), Query Frame = 1 Query: 1324 GFFGTVWDCSLEMGAFLAGLGPGALRGKRVVELGAGCGAVSALCAALG-ASEVVATDEKDLLPLLTSNLERNKCRGDLRNVNACAYDWGSPIQNYPLLARGGFDVVICSDLLYDPVGWGPLLASLRQLVRGSASATGGGGGEEPTVYLAHRTRNAQERDFFAML 1812 G G +WD SL + A+LA P + G+ V+ELG+G G + CAAL A+ VV TD D++PLL N+ N + + + WG+ I++ +DVV+ SD++YDP G+ PL+ASLR L S T+ + HR+R+ QE+ FF L Sbjct: 339 GIGGKLWDSSLILTAYLAAH-PEVIAGQHVIELGSGLGLIGLACAALSSAASVVLTDIDDVVPLLEYNVRLNDLQDE---ASVRPLWWGTSIEHL----SAPYDVVLMSDVVYDPFGYEPLIASLRDLTTPST-----------TILMGHRSRHPQEKQFFDSL 483 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig158.4037.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig158.4037.1 >prot_L-elsbetiae_contig158.4037.1 ID=prot_L-elsbetiae_contig158.4037.1|Name=mRNA_L-elsbetiae_contig158.4037.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=689bp MTTAERWTLGEETALSISLENEAGVRVRHPHGHHVWTQPESAAARDGLATback to top mRNA from alignment at L-elsbetiae_contig158:15842..24518+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig158.4037.1 ID=mRNA_L-elsbetiae_contig158.4037.1|Name=mRNA_L-elsbetiae_contig158.4037.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8677bp|location=Sequence derived from alignment at L-elsbetiae_contig158:15842..24518+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig158:15842..24518+ >mRNA_L-elsbetiae_contig158.4037.1 ID=mRNA_L-elsbetiae_contig158.4037.1|Name=mRNA_L-elsbetiae_contig158.4037.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4134bp|location=Sequence derived from alignment at L-elsbetiae_contig158:15842..24518+ (Laminarionema elsbetiae ELsaHSoW15)back to top |