prot_L-elsbetiae_contig1579.4032.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1579.4032.1
Unique Nameprot_L-elsbetiae_contig1579.4032.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A6H5JGF9_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGF9_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.660e-44
Identity = 75/88 (85.23%), Postives = 81/88 (92.05%), Query Frame = 0
Query:    1 MSARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVTVERR 88
            MSARLSGVQREVN+LYRLLLRAA++KDGG W G+TT LVRAEFR QAESV R DFRTIEHLLRAGNKKLKLL+MPGVKAAAG+TV RR
Sbjct:    1 MSARLSGVQREVNKLYRLLLRAARVKDGGEWAGSTTELVRAEFRAQAESVARTDFRTIEHLLRAGNKKLKLLKMPGVKAAAGITVVRR 88          
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: D7FX23_ECTSI (Heat shock protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX23_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 4.340e-40
Identity = 69/83 (83.13%), Postives = 75/83 (90.36%), Query Frame = 0
Query:    6 SGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVTVERR 88
            S  +REVNQLYRLLLRAA++KDGG W G+TT LVRAEFR QAESVGR DFRTIEHLLRAGNKKLKLL+MPGVKAAAG+TV RR
Sbjct:   52 SPTKREVNQLYRLLLRAARVKDGGEWAGSTTELVRAEFRAQAESVGRTDFRTIEHLLRAGNKKLKLLKMPGVKAAAGITVARR 134          
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A6U0URI4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0URI4_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.150e-10
Identity = 37/68 (54.41%), Postives = 45/68 (66.18%), Query Frame = 0
Query:    6 SGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLE 73
            SGVQ EV  LYR LLR AK K        T A+VR +FRE A SV R++ R IEHL+R G KK++LL+
Sbjct:   65 SGVQTEVLNLYRQLLRLAKAKGPD-----TYAMVRNKFREDARSVKRSEIRLIEHLVRQGKKKVRLLQ 127          
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: C5DJD6_LACTC (KLTH0F15576p n=2 Tax=Lachancea TaxID=300275 RepID=C5DJD6_LACTC)

HSP 1 Score: 61.6 bits (148), Expect = 1.160e-10
Identity = 37/78 (47.44%), Postives = 49/78 (62.82%), Query Frame = 0
Query:    1 MSARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVK 78
            M+ RLSG+QREV Q+YR  +RAA  K         T  +R EFR Q + + R DF TIEHLLR G+++L++   P VK
Sbjct:    1 MAKRLSGLQREVLQMYRQCIRAAHDKPKANQPNFVTH-IRKEFR-QYQDLPRKDFSTIEHLLRVGHRRLEMYSQPEVK 76          
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A7S1ZYE5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZYE5_TRICV)

HSP 1 Score: 61.6 bits (148), Expect = 2.810e-10
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 0
Query:   14 QLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVTVER 87
            + + +LL   K         TTT+  R+EFR++A S+ R DFRTIEH++R G K++KLL MPGV         R
Sbjct:   41 EYFLVLLSTDKCPSSPPGDATTTSYARSEFRKKAASIPRNDFRTIEHMIRWGQKQIKLLRMPGVSFVGSPNARR 114          
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: C1E625_MICCC (Complex1_LYR_dom domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E625_MICCC)

HSP 1 Score: 57.8 bits (138), Expect = 4.260e-9
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    4 RLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVT 84
            RLSG+ R+   L+R LLRAA+ K      G   A +RAEF E+   +   D + +EH +RAG KKL L++ P V AA+G++
Sbjct:    5 RLSGLARQALSLHRALLRAARRKSPEARAGIEAA-IRAEF-ERHRHLDPRDLQAVEHRIRAGRKKLALIDDPNVVAASGMS 83          
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: K3X5D9_GLOUD (Complex1_LYR_dom domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X5D9_GLOUD)

HSP 1 Score: 58.2 bits (139), Expect = 5.540e-9
Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 0
Query:    6 SGVQREVNQLYRLLLRAAKLKD------GGGWTGTTTAL--VRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLE-MPGVK 78
            SG+Q +V  LY+  LR A+ KD        G T   + L  VR  FR+ A SVGR DF  IEHL+R G + +K++E M G K
Sbjct:   20 SGLQMQVLALYKKALRTAQQKDRELVAASSGATAEVSTLTYVRERFRDDARSVGRMDFNVIEHLIRKGERDIKMMERMKGAK 101          
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: C1MMP0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MMP0_MICPC)

HSP 1 Score: 57.4 bits (137), Expect = 5.620e-9
Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 0
Query:    3 ARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAA 80
            ARLSG+ ++V  L+R LLRAA+ KD        +  +R +F   A    R D   +EHL+RAGNKKL +L  P V  A
Sbjct:    4 ARLSGLAKQVLSLHRSLLRAARSKDATA-RAAISRQIRDDFERHARLDPRKDVLLVEHLIRAGNKKLAMLRDPNVVGA 80          
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A2D4C155_PYTIN (Complex1_LYR_dom domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C155_PYTIN)

HSP 1 Score: 57.0 bits (136), Expect = 1.140e-8
Identity = 40/96 (41.67%), Postives = 53/96 (55.21%), Query Frame = 0
Query:    3 ARLSGVQREVNQLYRLLLRAAKLKDGG-----------GWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVTVER 87
            AR SG+Q +V  L+R  LR AK KD                G +   VR  FR+ A SVGR++F  IEHLLR G + LK+LE   +K+A+  +V R
Sbjct:    2 ARHSGLQLQVLTLFRSALRVAKRKDDALALEQGLRNTAYRQGPSYCFVRERFRDDALSVGRSNFAMIEHLLRKGQRDLKMLER--MKSASFASVXR 95          
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Match: A0A1G4MEN0_LACFM (LAFE_0F03752g1_1 n=1 Tax=Lachancea fermentati TaxID=4955 RepID=A0A1G4MEN0_LACFM)

HSP 1 Score: 56.2 bits (134), Expect = 1.520e-8
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 0
Query:    1 MSARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESVGRADFRTIEHLLRAGNKKLKLLEMPGVK 78
            MS R+SG+QREV QLYR  +RAA  K            +R+EF  Q + + R +F TIEHLLR G+K+L++   P +K
Sbjct:    1 MSRRVSGLQREVLQLYRQCIRAAHTKPKDNQP-RFLKYIRSEFG-QYKDLPRKEFSTIEHLLRVGHKRLEMYSAPELK 76          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1579.4032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGF9_9PHAE1.660e-4485.23Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
D7FX23_ECTSI4.340e-4083.13Heat shock protein, putative n=1 Tax=Ectocarpus si... [more]
A0A6U0URI4_9STRA1.150e-1054.41Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
C5DJD6_LACTC1.160e-1047.44KLTH0F15576p n=2 Tax=Lachancea TaxID=300275 RepID=... [more]
A0A7S1ZYE5_TRICV2.810e-1041.89Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
C1E625_MICCC4.260e-943.21Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
K3X5D9_GLOUD5.540e-943.90Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
C1MMP0_MICPC5.620e-943.59Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A2D4C155_PYTIN1.140e-841.67Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A1G4MEN0_LACFM1.520e-844.87LAFE_0F03752g1_1 n=1 Tax=Lachancea fermentati TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 10..70
e-value: 1.9E-9
score: 37.4
NoneNo IPR availablePANTHERPTHR13675LYR MOTIF-CONTAINING PROTEIN 2coord: 2..81
NoneNo IPR availablePANTHERPTHR13675:SF1SUCCINATE DEHYDROGENASE ASSEMBLY FACTOR 1, MITOCHONDRIALcoord: 2..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1579contigL-elsbetiae_contig1579:1143..2472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1579.4032.1mRNA_L-elsbetiae_contig1579.4032.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1579 201..2510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1579.4032.1 ID=prot_L-elsbetiae_contig1579.4032.1|Name=mRNA_L-elsbetiae_contig1579.4032.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
MSARLSGVQREVNQLYRLLLRAAKLKDGGGWTGTTTALVRAEFREQAESV
GRADFRTIEHLLRAGNKKLKLLEMPGVKAAAGVTVERR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR