mRNA_L-elsbetiae_contig15766.4023.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5KIY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIY6_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 5.700e-15 Identity = 64/164 (39.02%), Postives = 72/164 (43.90%), Query Frame = 1 Query: 13 FLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQRSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQ 504 F+ QGKY+EAEPLYKRSLAIDEKVYGPDHP+VAT LNNW +A TT LLP G+ G PLY R AI EKV GP+HP +A +LNNRA LL Q Sbjct: 348 FMFQGKYDEAEPLYKRSLAIDEKVYGPDHPDVATALNNWVRLLSICSSALKYL-------------------------LALTT-LLPVVPFLIFQ--------------------------GKYDQAG-PLYDRSLAILEKVHGPDHPDVAQSLNNRAELLRAQ 458
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: D7G180_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G180_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 7.070e-14 Identity = 61/163 (37.42%), Postives = 72/163 (44.17%), Query Frame = 1 Query: 19 SQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQ-RSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQ 504 SQGK+EEAEPLY+RSLAIDE+VYGPDHPEVATDLNN A LL T + LR Q + PL+ R AIDE+V GP+HP++AT L+N A LLE Q Sbjct: 80 SQGKHEEAEPLYRRSLAIDEEVYGPDHPEVATDLNNLAG-------------------------------------------LLETQIMTSVVRQSHSVNSHEPSTDVLG---LRQPDVAQGKYEEAEPLHRRSLAIDEEVYGPDHPNVATGLSNLAGLLESQ 196
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 1.170e-13 Identity = 91/163 (55.83%), Postives = 97/163 (59.51%), Query Frame = 1 Query: 22 QGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRK---WLRGSTTGQRS-TTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLE 498 QGKYEEAEPLY SLAIDEKVYGPDH EVA DLNN A XXXXXXXXXXXXXXXXXXXXXXXXXXXXX L A S R WL Q + +PLY R QAI +KVLGP+HP +AT LNNRA LL+ Sbjct: 87 QGKYEEAEPLYMLSLAIDEKVYGPDHLEVAEDLNNCAGLLSIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL----ESQALNKRVGVEGKCLCLFATSYRPHFVWLNYEYICQGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGLLK 245
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5LI51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LI51_9PHAE) HSP 1 Score: 80.1 bits (196), Expect = 1.030e-12 Identity = 57/161 (35.40%), Postives = 64/161 (39.75%), Query Frame = 1 Query: 22 QGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQRSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQ 504 QGK+ EAE LYKRSL+IDEKVYGPDHPEVA DLNN A P P + + + PLY R AIDEKV GP+HP +AT LNN AAL E Q Sbjct: 6 QGKFHEAESLYKRSLSIDEKVYGPDHPEVAADLNNMAVLMESQARRWGSSDKFLGSTSGKCVEAVPLHRQSLGIREKTLGPEHPDVAESLNNLAGVLRSQASVNPVFEILRNFQDA---------EPLYERSLAIDEKVYGPDHPEVATDLNNWAALYEVQ 157
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.260e-11 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 1237 IQGKFSEAEPLYERSQAIREKVLGPEHPNVASSLNNRAGLL 1359 IQGK+ EAEPLYERSQAI+EKVLG EHP+VASSLNNR LL Sbjct: 17 IQGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELL 57
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5KWM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM2_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 1.020e-10 Identity = 89/162 (54.94%), Postives = 98/162 (60.49%), Query Frame = 1 Query: 10 LFLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQRSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALL 495 L +QGK EAE LYKRSLAIDEKVYGP HPEVA DLNNW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + ++G+ LY R AI EKVLGP+HP++A +LNNRA LL Sbjct: 12 LLKAQGKLAEAESLYKRSLAIDEKVYGPHHPEVAKDLNNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAQNVPPGGVVEHSFIRLPYSAHSFHPLHHIQGNYD-----QAGMLYKRSLAIREKVLGPDHPNVAQSLNNRAGLL 168
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 5.480e-10 Identity = 115/185 (62.16%), Postives = 119/185 (64.32%), Query Frame = 1 Query: 22 QGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRK--------WLRG--STTGQ--------------RSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQ 504 QGKYEEA PLY+RSLAI EKV GPDHP+VA LNN A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXX W ST Q + T PLY RCQAI EK LGPEHP +ATTLNNRA LLE Q Sbjct: 798 QGKYEEAGPLYERSLAIREKVLGPDHPDVAQSLNNRALLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWAXATPSTVPQLKLLLYCAVNCIKGKYTDAEPLYERCQAIYEKRLGPEHPYVATTLNNRAGLLEAQ 982
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5L226_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L226_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 8.100e-10 Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 1 Query: 1204 LKHKLVTLRTYIQGKFSEAEPLYERSQAIREKVLGPEHPNVASSLNNRAGLL 1359 LK + +T T +QGK +EAEPLYERSQAIREKVLGP+HP+VA LNNRA LL Sbjct: 355 LKFRSIT-DTAVQGKHAEAEPLYERSQAIREKVLGPKHPDVAEVLNNRATLL 405
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A0A6H5K4D0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 1.020e-9 Identity = 57/166 (34.34%), Postives = 66/166 (39.76%), Query Frame = 1 Query: 10 LFLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAPVAYTTPLLPTXXXXXXXXXXXXXXXXXXXXALSTRKWLRGSTTGQRSTTGRPLYARCQAIDEKVLGPEHPSLATTLNNRAALLEKQG 507 L +QG Y+EA LY+RSLAI EK GPDHP+VA LNNWA LL AL+ R L G G+ LY R AI EK LGP+HP +A +LNN A LLE QG Sbjct: 423 LLKAQGNYDEAGKLYERSLAIREKALGPDHPDVAQSLNNWA--------------------------------------------LLLEAQVRAIRIPGSFLWYPIDSEALNNRV-LFLKAQGNYDEAGK-LYERSLAISEKALGPDHPDVAQSLNNWALLLESQG 542
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Match: A7C642_9GAMM (TPR repeat protein n=1 Tax=Beggiatoa sp. PS TaxID=422289 RepID=A7C642_9GAMM) HSP 1 Score: 68.2 bits (165), Expect = 1.020e-9 Identity = 30/41 (73.17%), Postives = 38/41 (92.68%), Query Frame = 1 Query: 10 LFLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWA 132 L +QG+Y++A+PLY+R+LAIDEKVYGP+HPEVATDLNN A Sbjct: 4 LHRTQGEYDQAKPLYERALAIDEKVYGPNHPEVATDLNNLA 44 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15766.4023.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15766.4023.1 >prot_L-elsbetiae_contig15766.4023.1 ID=prot_L-elsbetiae_contig15766.4023.1|Name=mRNA_L-elsbetiae_contig15766.4023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=505bp VNQLFLSQGKYEEAEPLYKRSLAIDEKVYGPDHPEVATDLNNWAQGKYDQback to top mRNA from alignment at L-elsbetiae_contig15766:839..3922+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15766.4023.1 ID=mRNA_L-elsbetiae_contig15766.4023.1|Name=mRNA_L-elsbetiae_contig15766.4023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3084bp|location=Sequence derived from alignment at L-elsbetiae_contig15766:839..3922+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15766:839..3922+ >mRNA_L-elsbetiae_contig15766.4023.1 ID=mRNA_L-elsbetiae_contig15766.4023.1|Name=mRNA_L-elsbetiae_contig15766.4023.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3030bp|location=Sequence derived from alignment at L-elsbetiae_contig15766:839..3922+ (Laminarionema elsbetiae ELsaHSoW15)back to top |