prot_L-elsbetiae_contig1575.4015.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1575.4015.1
Unique Name	prot_L-elsbetiae_contig1575.4015.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	668

Homology

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BLAST of mRNA_L-elsbetiae_contig1575.4015.1 vs. uniprot
Match: A0A6H5KJ77_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ77_9PHAE)

HSP 1 Score: 709 bits (1831), Expect = 1.010e-235
Identity = 416/587 (70.87%), Postives = 446/587 (75.98%), Query Frame = 0

Query:   95 MGGKKDEALGEVFIPIASFKEPKARRTKVEMKVAPPPVASSRYSKTLGKLNLTIKTPHINIKTPNILGGGGSRSPSPSPTRGRXXXASPTREPPDLGVLCVSMSAIETELPDAATYKGRGVPPGGVKVRCSLDLADEFTCAWPALLLKHETPGGAXXXXXXXXXXXXXXXXXXXEGGR--GTVEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYAMEVFENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLDQAEVPAGWAWSAPAWTVVGGDCPRDKDGWTYGVDGSF----SALLAD--RSSGLS---KEQKGTAVRCRRWVRPLQRIGVVAASAPASPPRPGSAEE-----GEE-GAGADIPEGLRPFCRPDVDRRVVALVHENQ--RYQPGAGWGSSDEDHLLPEDRAPLTGASGVHAIDDLDDIDPSSLG--PPGYRWEDEDPNHDDAFADGWNAGPWTYAESFETLPSELKRSPGG--PALPLLSGXXXXXXXXXXXXXXXXXXDRPAGVRARLWWRSMVVADSG-GAVGAVGSRVVSTERRRKDSVAVGRRKVPHATALT 657
            MGGKKDEALGEVFIPIASFKEPKA+RTK+EMK+APPP A+SRYSKTLGK N+ IKTP       NILGGGG RSPS SP RG XXX  P REPPDLG LCVSMS IE ELPD +TY+GRGVPPGGVKVRCSLDLADEFTCAWPALLL+H  P                      EGG   G VEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGY MEV+ENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLL+QA        +   +   G   PR    W     G+     +AL A   R S ++   KEQK TAVRCRRWVRPLQR G+VA S PA PPR G+A       GEE  A  +IP+GL+PFCRP++D RVVALVHENQ  RYQPGAGWGS+DEDHLLPEDRAPLTGASG+HAIDDLDDIDPSSLG  PPGYRWEDEDPNHDD FADGWN+GPWTYAESFE+LP ELK +     P       XXXXXXXXXXXXXXXXXXDRPAGVR+R WWR MVVAD G G +G  GSRVVS  RR K SVAVGRRKVPHA   T
Sbjct:    1 MGGKKDEALGEVFIPIASFKEPKAKRTKLEMKIAPPPPATSRYSKTLGKYNINIKTPSXXXXXXNILGGGG-RSPSASPPRGXXXXXXPVREPPDLGTLCVSMSVIEAELPDTSTYRGRGVPPGGVKVRCSLDLADEFTCAWPALLLRHGAPSSGSGGDADE------------EGGERGGGVEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYVMEVYENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLEQARGRELGDLNGQRFRQGGHGAPRLGPSWAATAPGTRMVGRTALTAASRRFSPIAHRDKEQKRTAVRCRRWVRPLQRTGIVA-STPALPPRTGAAAAAGAVGGEEFAATVEIPDGLKPFCRPELDGRVVALVHENQARRYQPGAGWGSTDEDHLLPEDRAPLTGASGIHAIDDLDDIDPSSLGGPPPGYRWEDEDPNHDDTFADGWNSGPWTYAESFESLPRELKLTAATRPPPXXXXXXXXXXXXXXXXXXXXXXXXDRPAGVRSRAWWRCMVVADDGSGGLGTSGSRVVSMGRR-KSSVAVGRRKVPHAATTT 572

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BLAST of mRNA_L-elsbetiae_contig1575.4015.1 vs. uniprot
Match: D8LJF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF1_ECTSI)

HSP 1 Score: 681 bits (1758), Expect = 1.550e-223
Identity = 408/655 (62.29%), Postives = 436/655 (66.56%), Query Frame = 0

Query:    1 PPQDISGNLRRLRLVLHSAKGLVSSDITGVSDPYCVVVPVRHDGSEVTSERGETSWRRGGARQRPEEWQESFELCRWCAPEEVKGVKVSLLDRDMGGKKDEALGEVFIPIASFKEPKARRTKVEMKVAPPPVASSRYSKTLGKLNLTIKTPHINIKTPNILGGGGSRSPSPSPTRGRXXXASPTREPPDLGVLCVSMSAIETELPDAATYKGRGVPPGGVKVRCSLDLADEFTCAWPALLLKHETPGGAXXXXXXXXXXXXXXXXXXXEGGRGT-VEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYAMEVFENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLDQAEVPAGWAWSAPAWTVVGGDCPRDKDGWTYGVDGSFSALLADRSSGLSKEQKGTAVRCRRWVRPLQRIGVVAASAPASPPRPGSAEEGEEGAGADIPEGLRPFCRPDVDRRVVALVHENQRYQPGAGWGSSDEDHLLPEDRAPLTGASGVHAIDDLDDIDPSSLGPPGYRWEDEDPNHDDAFADGWNAGPWTYAESFETLPSELKRSPGGPALPLLSGXXXXXXXXXXXXXXXXXXDRPAGVRARLWWRSMVVADSG-GAVGAVGSRVVSTERRRKDSVAVGRRKVPHA 653
            P  DISGNLRRLRLVLHSA+GLVSSD+TGVSDPYC+VVPVRHDGSEVTSE+GET+WRRGGARQRPEEWQE+FELCRWC PE+VKGVKVSLLDRDMGGKKDEALGEVFIPIASFKEPKA+RTK+EMK+ PPP A+SRYSKTLGK N+ IKTP       NILGGGG RSPS SP R  XXX    REPPDLG LCVSMS IETELPD +TY+GRGVPPGGVK+RCSLDLADEFTCAWPALLL+H  P                       GGRG  VEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGY MEV+ENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLL+QAEVPAGWAWSAPAWT+VGGDCPRDKDGWTYG DGSFS+LLADR+SG                   QR                   EG+              CR   + ++ A                                                                         AGP       + LP    R+          GXXXXXXXXXXXXXXXXXXDRPAGVR+R WWR MVVAD G G  G  GSRVVS  RRR  SVAVGRRKVPHA
Sbjct:   85 PLHDISGNLRRLRLVLHSARGLVSSDVTGVSDPYCIVVPVRHDGSEVTSEKGETTWRRGGARQRPEEWQEAFELCRWCTPEDVKGVKVSLLDRDMGGKKDEALGEVFIPIASFKEPKAKRTKLEMKITPPPPATSRYSKTLGKYNINIKTPSXXXXXXNILGGGG-RSPSASPPRXXXXXXXXVREPPDLGTLCVSMSVIETELPDTSTYRGRGVPPGGVKIRCSLDLADEFTCAWPALLLRHGAPSSGSGGDADEEG-----------GGRGGGVEKWRVSAGFGGLVLSKVASGEGAAADSSPFLRMDPSGPADGYVMEVYENQRKKQPWGWGSGRKRHLRTSDPGRFSDAKGENRLHVKLLEQAEVPAGWAWSAPAWTIVGGDCPRDKDGWTYGTDGSFSSLLADRTSG-------------------QRA------------------EGD--------------CRSMPELKLTAA------------------------------------------------------------------------AGP-------QRLPLGRDRA----------GXXXXXXXXXXXXXXXXXXDRPAGVRSRAWWRCMVVADDGSGGFGTSGSRVVSMGRRRS-SVAVGRRKVPHA 586

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1575.4015.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1575.4015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KJ77_9PHAE	1.010e-235	70.87	C2 domain-containing protein n=1 Tax=Ectocarpus sp...	[more]
D8LJF1_ECTSI	1.550e-223	62.29	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006614	Peroxin/Ferlin domain	SMART	SM00693	dysfn	coord: 474..544 e-value: 0.012 score: 24.8 coord: 314..382 e-value: 6.5 score: 8.1
IPR035892	C2 domain superfamily	GENE3D	2.60.40.150		coord: 7..156 e-value: 1.3E-12 score: 49.9
IPR000008	C2 domain	PFAM	PF00168	C2	coord: 11..119 e-value: 7.1E-7 score: 29.5
IPR000008	C2 domain	PROSITE	PS50004	C2	coord: 11..107 score: 9.272
None	No IPR available	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 9..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1575	contig	L-elsbetiae_contig1575:18415..24568 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1575.4015.1	mRNA_L-elsbetiae_contig1575.4015.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1575 18415..24568 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1575.4015.1 ID=prot_L-elsbetiae_contig1575.4015.1|Name=mRNA_L-elsbetiae_contig1575.4015.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=668bp
PPQDISGNLRRLRLVLHSAKGLVSSDITGVSDPYCVVVPVRHDGSEVTSE
RGETSWRRGGARQRPEEWQESFELCRWCAPEEVKGVKVSLLDRDMGGKKD
EALGEVFIPIASFKEPKARRTKVEMKVAPPPVASSRYSKTLGKLNLTIKT
PHINIKTPNILGGGGSRSPSPSPTRGRSPSASPTREPPDLGVLCVSMSAI
ETELPDAATYKGRGVPPGGVKVRCSLDLADEFTCAWPALLLKHETPGGAG
GGGGGMGGDEDEDNEGGGEGGRGTVEKWRVSAGFGGLVLSKVASGEGAAA
DSSPFLRMDPSGPADGYAMEVFENQRKKQPWGWGSGRKRHLRTSDPGRFS
DAKGENRLHVKLLDQAEVPAGWAWSAPAWTVVGGDCPRDKDGWTYGVDGS
FSALLADRSSGLSKEQKGTAVRCRRWVRPLQRIGVVAASAPASPPRPGSA
EEGEEGAGADIPEGLRPFCRPDVDRRVVALVHENQRYQPGAGWGSSDEDH
LLPEDRAPLTGASGVHAIDDLDDIDPSSLGPPGYRWEDEDPNHDDAFADG
WNAGPWTYAESFETLPSELKRSPGGPALPLLSGGGGGSSRLLPRSPPPPP
PDRPAGVRARLWWRSMVVADSGGAVGAVGSRVVSTERRRKDSVAVGRRKV
PHATALTGAGLRGGPGAG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006614	Peroxin/Ferlin
IPR035892	C2_domain_sf
IPR000008	C2_dom