prot_L-elsbetiae_contig15741.4009.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15741.4009.1
Unique Nameprot_L-elsbetiae_contig15741.4009.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length85
Homology
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: D8LP03_ECTSI (LETM1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP03_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 3.630e-39
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0
Query:    6 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKKV 81
            QGSIL PREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFP+FFPSTYTDRRQNLLKMYTEVEKKV
Sbjct:  504 QGSILNPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV 579          
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A6H5LQ87_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ87_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 1.010e-37
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0
Query:    6 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKKV 81
            QGSIL PREVRTLRRTAKDCVTFIPFV+ILI PL+PVGHVLVFSFIQRFFP+FFPSTYTDRRQNLLKMYTEVEKKV
Sbjct:  687 QGSILNPREVRTLRRTAKDCVTFIPFVVILIFPLTPVGHVLVFSFIQRFFPNFFPSTYTDRRQNLLKMYTEVEKKV 762          
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A836CA55_9STRA (LETM1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA55_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.380e-32
Identity = 63/80 (78.75%), Postives = 70/80 (87.50%), Query Frame = 0
Query:    2 FVGK--QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEK 79
             VGK  QG  LKPREVRTLRR+ KD +T IP +IILI+PLSPVGHVLVFSFIQR+FPDFFPST+T+RRQNLLKMY EVEK
Sbjct:  190 LVGKAIQGYTLKPREVRTLRRSGKDLLTLIPTIIILILPLSPVGHVLVFSFIQRYFPDFFPSTFTERRQNLLKMYEEVEK 269          
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S1R4U4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R4U4_ALECA)

HSP 1 Score: 112 bits (281), Expect = 1.680e-30
Identity = 51/68 (75.00%), Postives = 65/68 (95.59%), Query Frame = 0
Query:   10 LKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEV 77
            LKPREVR L+RTAKD VTF+PF+IILIIP++P+GHVLVFSFIQ+FFPDFFPST+T+RRQN++K+Y ++
Sbjct:   39 LKPREVRALQRTAKDVVTFVPFLIILIIPMTPIGHVLVFSFIQKFFPDFFPSTFTERRQNVVKIYQDI 106          
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: L1IDU4_GUITC (LETM1 domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IDU4_GUITC)

HSP 1 Score: 121 bits (304), Expect = 2.820e-30
Identity = 58/72 (80.56%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    7 GSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVE 78
            G  L+PREVRTLRRTAKD +TFIPF+IIL+IPLSPVGHVLVFSFIQRFFPDFFP+ YTDRRQNL+++Y  VE
Sbjct:  622 GDTLQPREVRTLRRTAKDLITFIPFIIILLIPLSPVGHVLVFSFIQRFFPDFFPTPYTDRRQNLMRIYQSVE 693          
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S0U8H3_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U8H3_HEMAN)

HSP 1 Score: 117 bits (294), Expect = 4.090e-29
Identity = 59/73 (80.82%), Postives = 62/73 (84.93%), Query Frame = 0
Query:    6 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVE 78
            +G  L PREVRTLRR  KD  TFIPF+IILIIPLSPVGHVLVFSFIQRFFPDFFPS YTDRRQ LL+MY  VE
Sbjct:  432 RGQTLSPREVRTLRRAFKDTTTFIPFIIILIIPLSPVGHVLVFSFIQRFFPDFFPSPYTDRRQKLLRMYQAVE 504          
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S2SGM0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SGM0_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.550e-29
Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = 0
Query:    6 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEV 77
            QG+ L PRE RTLRRTAKD VT +PFVIIL+IPLSPVGHVLVFSFIQR FPDF PSTYT+RRQNL+K+Y  +
Sbjct:  275 QGTTLAPREARTLRRTAKDLVTLVPFVIILLIPLSPVGHVLVFSFIQRVFPDFMPSTYTERRQNLMKLYEAI 346          
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S1NU99_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NU99_9EUGL)

HSP 1 Score: 118 bits (295), Expect = 4.710e-29
Identity = 58/75 (77.33%), Postives = 68/75 (90.67%), Query Frame = 0
Query:    6 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKK 80
            +G  LK REVRT+RRT KD +TFIP VIIL+IPLSP+GHVLVFSFIQRFFP+FFPS+++DRRQNLLKMY E+EKK
Sbjct:  657 EGYTLKAREVRTVRRTMKDFLTFIPTVIILLIPLSPIGHVLVFSFIQRFFPEFFPSSFSDRRQNLLKMYEEIEKK 731          
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A4D9D1V1_9STRA (LETM1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1V1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.630e-28
Identity = 57/75 (76.00%), Postives = 65/75 (86.67%), Query Frame = 0
Query:    6 QGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKK 80
            QG  LKPREVRTL+RTAKD +T IPF IILI PL+P+GHVLVFS IQR FPDFFPST+T+RRQNL KMY E++KK
Sbjct:  640 QGYTLKPREVRTLQRTAKDLLTLIPFTIILIFPLTPIGHVLVFSLIQRIFPDFFPSTFTERRQNLSKMYDEIDKK 714          
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Match: A0A7S2X822_9EUKA (Hypothetical protein n=2 Tax=Lotharella TaxID=74819 RepID=A0A7S2X822_9EUKA)

HSP 1 Score: 109 bits (272), Expect = 1.940e-28
Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 0
Query:    7 GSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSFIQRFFPDFFPSTYTDRRQNLLKMYTEVEKKV 81
            G  LKPRE R L+RTAKD +T +PF IIL+IPL+PVGHVLVFS IQ+FFPDF+PS YT+RRQNL+++Y E+E+K+
Sbjct:   99 GDTLKPREARMLQRTAKDLLTLLPFTIILLIPLTPVGHVLVFSAIQKFFPDFYPSPYTERRQNLVRLYQEIEQKL 173          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15741.4009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LP03_ECTSI3.630e-3997.37LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5LQ87_9PHAE1.010e-3793.42LETM1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A836CA55_9STRA4.380e-3278.75LETM1 domain-containing protein n=1 Tax=Tribonema ... [more]
A0A7S1R4U4_ALECA1.680e-3075.00Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
L1IDU4_GUITC2.820e-3080.56LETM1 domain-containing protein n=2 Tax=Guillardia... [more]
A0A7S0U8H3_HEMAN4.090e-2980.82Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S2SGM0_9STRA4.550e-2977.78Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1NU99_9EUGL4.710e-2977.33Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A4D9D1V1_9STRA1.630e-2876.00LETM1 domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S2X822_9EUKA1.940e-2868.00Hypothetical protein n=2 Tax=Lotharella TaxID=7481... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 67..85
NoneNo IPR availablePANTHERPTHR14009LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEINcoord: 13..85
NoneNo IPR availablePANTHERPTHR14009:SF33coord: 13..85
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 26..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..85
NoneNo IPR availableTMHMMTMhelixcoord: 26..48
IPR011685LETM1-likePFAMPF07766LETM1coord: 6..80
e-value: 1.6E-10
score: 40.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15741contigL-elsbetiae_contig15741:151..1219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15741.4009.1mRNA_L-elsbetiae_contig15741.4009.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15741 142..1219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15741.4009.1 ID=prot_L-elsbetiae_contig15741.4009.1|Name=mRNA_L-elsbetiae_contig15741.4009.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp
MFVGKQGSILKPREVRTLRRTAKDCVTFIPFVIILIIPLSPVGHVLVFSF
IQRFFPDFFPSTYTDRRQNLLKMYTEVEKKVRRAQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011685LETM1