mRNA_L-elsbetiae_contig10387.401.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: D7FN97_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN97_ECTSI) HSP 1 Score: 164 bits (416), Expect = 3.820e-48 Identity = 87/201 (43.28%), Postives = 125/201 (62.19%), Query Frame = 1 Query: 4 VSSLFPYLPWTNQPSRKVAIDSGTSVRVVRSITTIGSSEDAGSVLNMILYTPPLLEAFKAFCNKALCSESLMFLLDTEAFSASLEEGLTGSAAGY-----------------YDRYVEIVDKYVRERSPFEINIESKTRNGILRATDRKVFTELTLAEKTQILDTAVREVSKMLKDNLYGKFRATTEFKQIQHQVSALEGV 555 +SSLFPY+PWT KVA+++ ++R + +S G+VL++I+ PPL +AF+ +C ALCSESLMFL+D + F+++L S AG ++++ IVDKY+RE SPFE+NIESK RN ILR DR F L L +K +L+ A ++VS ML++NLY KFR T +FKQIQ Q+ ++E Sbjct: 4 ISSLFPYIPWTKHERSKVAVEASYTLR------SQSASSAGGTVLDLIIQFPPLFQAFEEYCRNALCSESLMFLVDADEFNSALHAVSKFSTAGKDPESAAVAVNECEHNPNFEQFAAIVDKYIREGSPFEVNIESKIRNEILREVDRASFERLNLDDKEHLLEKATKQVSNMLRENLYHKFRETEQFKQIQEQLFSVENT 198
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: A0A6H5JLE7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE7_9PHAE) HSP 1 Score: 148 bits (373), Expect = 1.600e-40 Identity = 84/199 (42.21%), Postives = 121/199 (60.80%), Query Frame = 1 Query: 4 VSSLFPYLPWTNQPSRKVAIDSGTSVRVVRSITTIGSSEDAGSVLNMILYTPPLLEAFKAFCNKALCSESLMFLLDTEAFSASLEEGLTGSAAGY-----------------YDRYVEIVDKYVRERSPFEINIESKTRNGILRATDRKVFTELTLAEKTQILDTAVREVSKMLKDNLYGKFRATTEFKQIQHQVSALE 549 +S LFPY+PWT SRKVA+++ ++R + +S G+VL++I+ PPL +A + + ESLMFL+D + F+ SL ++AG ++++ IVDKY+RE SPFE+NIESK R+ ILR DR F LTL EK +LD A ++VS ML++NLY KFR T +FKQIQ Q+ ++E Sbjct: 101 ISLLFPYIPWTKHGSRKVAVEASYTLR------SQAASSAGGTVLDLIIQFPPLFQACLSPVSDCAFVESLMFLVDADEFNCSLHAVSKFTSAGADPSPAAMGVVECEENLNFEQFAAIVDKYIREGSPFEVNIESKIRDEILREVDRASFRRLTLDEKVHLLDKATKQVSNMLRENLYLKFRETEQFKQIQEQLFSVE 293
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: A0A6H5K976_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K976_9PHAE) HSP 1 Score: 143 bits (361), Expect = 3.550e-37 Identity = 88/189 (46.56%), Postives = 117/189 (61.90%), Query Frame = 1 Query: 4 VSSLFPYLPWTNQPSRKVAIDSGTSVRV-VRSITTIGSSEDAGSVLNMILYTPPLLEAFKAFCNKALCSESLMFLLDTEAFSASLEEGLTGSAAGY---YDRYVEIVDKYVRERSPFEINIESKTRNGILRATDRKVFTELTLAEKTQILDTAVREVSKMLKDNLYGKFRATTEFKQIQHQVSALEGVG 558 ++SLFPY+PWT + S VAID +V + ++ +S L IL PPLLEAF FC KALCSESLMFL + F SL+ S A Y + R+ EIVD+Y+R+ S FE+NIESKT+ IL T F EL L + ILD AV+E+ KML++NLY KFR+T +FK+I+ + + E G Sbjct: 309 IASLFPYVPWTTR-SGAVAIDVMNESKVFTKPSSSKFTSVKLDDKLEEILRFPPLLEAFGEFCRKALCSESLMFLTAGKDFHESLD----ASDADYDTIFARFNEIVDQYIRDGSSFEVNIESKTKAQILSRTSMSSFKELPLDDAVCILDLAVKEIGKMLQENLYNKFRSTEQFKEIKDMLYSAEAAG 492
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI) HSP 1 Score: 137 bits (346), Expect = 2.540e-35 Identity = 77/175 (44.00%), Postives = 110/175 (62.86%), Query Frame = 1 Query: 1 LVSSLFPYLPWTNQPSRKVAIDSGTSVRVVRSITTIGSSEDAGSVLNMILYTPPLLEAFKAFCNKALCSESLMFLLDTEAFSASLEEGLTGSAAGYYDRYVEIVDKYVRERSPFEINIESKTRNGILRATDRKVFTELTLAEKTQILDTAVREVSKMLKDNLYGKFRATTEFKQI 525 +++ LFPY+PW VAIDS + + S S+ + IL P LLEAF+ FC KALCSES++FL AF+ S+ T + + +++I DKY+++ SPFEINIESKT++ I++ TD++ F +L L + + LD A +EV KMLK+NLY KFR T +FKQI Sbjct: 254 IMAKLFPYVPWRKHGGT-VAIDSAECMVLAASTHCSKSTVKLDDAMEEILRCPVLLEAFEEFCRKALCSESILFLKAAWAFNDSVYAS-TANEDTNFALFMDIFDKYIKDGSPFEINIESKTKSFIMKRTDKEAFKQLRLDDAARGLDAAAKEVGKMLKENLYDKFRQTDQFKQI 426
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: D7FYZ5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ5_ECTSI) HSP 1 Score: 113 bits (283), Expect = 6.690e-26 Identity = 64/181 (35.36%), Postives = 99/181 (54.70%), Query Frame = 1 Query: 16 FPYLPWTNQPSRKVAIDSGTSVRVV---RSITTIGSSEDAGSVLNMILYTPPLLEAFKAFCNKALCSESLMFLLDTEAFSASLEEGLTGSAAGYYDRYVEIVDKYVRERSPFEINIESKTRNGILRATDRKVFTELTLAEKTQILDTAVREVSKMLKDNLYGKFRATTEFKQIQHQVSALE 549 FPY+PW S KVA+ ++ V R ++TI L I+ TPPLLEAF +FC KALC ES++ L + AF S+ + + +V IV+K+++ S +E+NI+ + R G++R D F EL + I A + S+ML DNL KF+AT +++I + A++ Sbjct: 350 FPYVPWRRSASGKVAVGMNETMHVTCTSRPLSTIQLGR-----LETIINTPPLLEAFDSFCQKALCGESILLLREVAAFRDSIY-AVEADDDALFKEFVAIVNKFIKSGSSYEVNIDCRARTGVMRDVDEARFKELDTDGRADIFTLAETQTSQMLADNLLAKFQATERYQRIAEGLLAID 524
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: A0A6H5K6R2_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6R2_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 4.270e-20 Identity = 58/140 (41.43%), Postives = 76/140 (54.29%), Query Frame = 1 Query: 1 LVSSLFPYLPWTNQPSRKVAIDSGTSVRVVRSIT--TIGSSEDAGSVLNMILYTPPLLEAFKAFCNKALCSESLMFLLDTEAFSASLEEGLTGSAAGYYDRYVEIVDKYVRERSPFEINIESKTRNGILRATDRKVFTEL 414 +++SL PY+PW S VA+D+ R ++ I S L IL PLLEAF+ FC KALC ESLMFL F S+ T S G + +IV KYV+ SPFE+NI+SKT++ IL R+ F L Sbjct: 30 IIASLLPYIPWREDASI-VAVDAVGRRFTSRGVSLGNINRSVKLDDALEQILCFTPLLEAFEEFCQKALCIESLMFLKAVMGFRGSVHAS-TASDDGNFTLLTDIVQKYVQSGSPFEVNIDSKTKSNILVKITRETFMRL 167
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: A0A6H5J8W8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8W8_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 1.760e-13 Identity = 49/145 (33.79%), Postives = 76/145 (52.41%), Query Frame = 1 Query: 160 PLLEAFKAFCNKALCSESLMFLLDTEAFSASLEEG-LTGSAAGYYDRYVE-----------IVDKYVRERSPFEINIESKTRNGILRATDRKVFTELTLAEKTQILDTAVREVSKMLKDNLYGKFRATTEFKQIQHQVSALEGVG 558 PL EAF FC K+LCSES FLLD F + EG + G A G + E +V++Y+++ +P EINI S T++ I+ + F L + I A RE+ ++L+DNL +F + ++K+ A++G G Sbjct: 202 PLREAFGEFCQKSLCSESFQFLLDASEFRGVIVEGPVDGDANGSAEEENEAPTRRLGDVATMVNEYIKDGAPSEINIGSDTKHDIMELAKAEAFASLDQDARKLIFVKAEREIKRILEDNLMARFLVSAQYKR------AVDGDG 340
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: A0A6H5JIZ3_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIZ3_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 4.990e-13 Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 160 PLLEAFKAFCNKALCSESLMFLLDTEAFSASLEEG-LTGSAAGYYDRYVE-------------IVDKYVRERSPFEINIESKTRNGILRATDRKVFTELTLAEKTQILDTAVREVSKMLKDNLYGKFRATTEFKQIQHQVSALEGVG 558 PL EAF FC K+LCSES FLLD F + EG + G A G + E +V++Y+++ +P EINI S T+ I+ + F L + I A RE+ ++L+DNL +F A+ ++K+ A++G G Sbjct: 303 PLREAFGEFCQKSLCSESFQFLLDASEFRGVIVEGPVDGDANGSAEEENEAPTHTSGLGDVATMVNEYIKDGAPSEINIGSDTKRDIMELAKVEAFASLDQDARLLIFVQAEREIRRILEDNLMARFLASAQYKR------AVDGDG 443
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: A0A6H5JD29_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD29_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 1.220e-11 Identity = 48/153 (31.37%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 121 DAGSVLNMILYTPPLLEAFKAFCNKALCSE-----SLMFLLDTEAFSASLEEG-LTGSAAGYYDRYVE-------------IVDKYVRERSPFEINIESKTRNGILRATDRKVFTELTLAEKTQILDTAVREVSKMLKDNLYGKFRATTEFKQ 522 D+ + ++ Y P L EAF FC K+LCSE S FLLD F + EG + G A G + +E +V++Y+++ +P EINI S T++ I+ + F L + I A RE+ +L+DN+ +F A+ ++K+ Sbjct: 88 DSNRLAGLMNYLP-LREAFGEFCQKSLCSEISRCVSFRFLLDASKFKGVIVEGPVDGDANGSAEEEIEAPTHTSGLGDVVAMVNEYIKDGAPSEINIGSDTKHDIMELAKVEAFASLDQDARKLIFVKAEREIKMILEDNIMARFLASAQYKR 239
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Match: D7G0P5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P5_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 2.030e-11 Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 160 PLLEAFKAFCNKALCSESLMFLLDTEAFSASLEEG-LTGSAAGYYDRYVE-------------IVDKYVRERSPFEINIESKTRNGILRATDRKVFTELTLAEKTQILDTAVREVSKMLKDNLYGKFRATTEFKQIQHQVSALEGVG 558 PL EAF FC K+ CSE FLLD F + EG + G A G + E +V++Y+++ +P EINI S T++ I+ + FT L + I A RE+ ++L+DNL +F A+ ++K+ A++G G Sbjct: 156 PLREAFGEFCQKSFCSE---FLLDASEFRGVIVEGPVEGDANGSAEEENEAPTRTSGLGDVAAMVNEYIKDGAPSEINIGSDTKHDIMELAKVEAFTSLDQDARRLIFGKAEREIRRILEDNLMARFLASAQYKR------AVDGDG 293 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10387.401.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10387.401.1 >prot_L-elsbetiae_contig10387.401.1 ID=prot_L-elsbetiae_contig10387.401.1|Name=mRNA_L-elsbetiae_contig10387.401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp LVSSLFPYLPWTNQPSRKVAIDSGTSVRVVRSITTIGSSEDAGSVLNMILback to top mRNA from alignment at L-elsbetiae_contig10387:2283..4062- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10387.401.1 ID=mRNA_L-elsbetiae_contig10387.401.1|Name=mRNA_L-elsbetiae_contig10387.401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1780bp|location=Sequence derived from alignment at L-elsbetiae_contig10387:2283..4062- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10387:2283..4062- >mRNA_L-elsbetiae_contig10387.401.1 ID=mRNA_L-elsbetiae_contig10387.401.1|Name=mRNA_L-elsbetiae_contig10387.401.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig10387:2283..4062- (Laminarionema elsbetiae ELsaHSoW15)back to top |