mRNA_L-elsbetiae_contig15726.4001.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: D7FRH8_ECTSI (Signal peptide peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH8_ECTSI) HSP 1 Score: 169 bits (427), Expect = 1.350e-45 Identity = 103/161 (63.98%), Postives = 114/161 (70.81%), Query Frame = 1 Query: 133 LNVRDVVDALEMAXXXGTHTASSTYSGVFSYRSWGPGRGCLACVQEVRDAITTFRYGHGRAHSGAASSDATDSAGFTSVDGAK-DGQQQQRRKFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIFAREASK 612 + RDVVDALEMA G FSYRSWG G LACVQEVRDA+T FR A SDA+ +AG +GA+ DG+Q R++FTIAVADTFGEGGPAVGEYFLASAFEKVLVQK+G VGLTG QKLFFRGF DKYGIKPE+FARE K Sbjct: 1 METRDVVDALEMAAKDNKVRG---VLGRFSYRSWGGGY--LACVQEVRDAVTRFRE---------AGSDASATAG----EGAEADGRQ--RKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYK 141
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: A0A7S0QZ39_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QZ39_9CRYP) HSP 1 Score: 77.4 bits (189), Expect = 3.690e-13 Identity = 44/114 (38.60%), Postives = 57/114 (50.00%), Query Frame = 1 Query: 253 LACVQEVRDAITTFRYGHGRAHSGAASSDATDSAGFTSVDGAKDGQQQQRRKFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIF 594 LA QEVR AI FR A+ RKF ADTFGE G +Y+LAS+F+K+ +Q SGLVGL G++ Q LFF+ F K G++ +IF Sbjct: 105 LATAQEVRKAILDFRE-------------------------AQKALPPANRKFAWVAADTFGEAGQGSTQYYLASSFDKIFMQPSGLVGLIGVSMQSLFFKDFLAKIGVQAQIF 193
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: A0A2E2QB37_9PROT (Protease 4 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E2QB37_9PROT) HSP 1 Score: 75.1 bits (183), Expect = 3.360e-12 Identity = 34/69 (49.28%), Postives = 46/69 (66.67%), Query Frame = 1 Query: 406 KFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIFAREASK 612 K+T A AD+FGE G + EYFLA++F++V +Q G + L G A L+F+G FDKY + PE F RE K Sbjct: 148 KYTYAYADSFGEAGYGMDEYFLAASFDEVWMQPLGSLSLNGFALSNLYFKGLFDKYKVMPEFFQREEFK 216
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: A0A7S1E955_HEMAN (Hypothetical protein (Fragment) n=3 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E955_HEMAN) HSP 1 Score: 74.3 bits (181), Expect = 6.060e-12 Identity = 40/115 (34.78%), Postives = 57/115 (49.57%), Query Frame = 1 Query: 253 LACVQEVRDAITTFRYGHGRAHSGAASSDATDSAGFTSVDGAKDGQQQQRRKFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIFA 597 +A +QE+RDAI +FR Q + R+ + ADTFGEGG G Y+LA+AF+KV +Q +GLVGL GI + F + K G++P+ A Sbjct: 70 MAKMQEIRDAILSFR-----------------------------SDQAEPRRPAVFAADTFGEGGQGTGHYYLATAFDKVYLQPTGLVGLVGIHSEAFFLKKLLAKIGVQPQFLA 155
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: A0A1H5UZK8_9ACTN (Signal peptide peptidase A. Serine peptidase. MEROPS family S49 n=1 Tax=Thermomonospora echinospora TaxID=1992 RepID=A0A1H5UZK8_9ACTN) HSP 1 Score: 73.2 bits (178), Expect = 1.500e-11 Identity = 35/71 (49.30%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 406 KFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIFAREASKWL 618 K T+A ++TFGEGG Y+LASAF++V +Q +G VGLTG+A ++ F RG DK GI+P AR K + Sbjct: 99 KLTVAWSETFGEGGHGTVPYYLASAFDRVYLQPTGEVGLTGVALEEPFVRGALDKAGIEPRFAARHEYKTM 169
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: A0A2P6TQA9_CHLSO ([Acyl-carrier-protein] S-malonyltransferase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQA9_CHLSO) HSP 1 Score: 73.2 bits (178), Expect = 1.720e-11 Identity = 43/125 (34.40%), Postives = 63/125 (50.40%), Query Frame = 1 Query: 253 LACVQEVRDAITTFRYGHGRAHSGAASSDATDSAGFTSVDGAKDGQQQQRRKFTIAVADTFGEGGPA-VGEYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIFAREASKWLSS 624 LA VQE+R A+ FR ++ R T+A AD FGEGG ++LASAF+ + +Q +GLV +TG+A Q ++ RGF +++ +KP FARE K +S Sbjct: 117 LAQVQELRSAVAEFR------------------------------RRAGDRAPTVAYADAFGEGGSGGTAAFYLASAFDHIFLQPTGLVSVTGLAAQGIYARGFLERWSVKPAFFAREEYKNAAS 211
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: A0A7S0YTA2_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YTA2_9CRYP) HSP 1 Score: 72.8 bits (177), Expect = 1.780e-11 Identity = 36/115 (31.30%), Postives = 56/115 (48.70%), Query Frame = 1 Query: 253 LACVQEVRDAITTFRYGHGRAHSGAASSDATDSAGFTSVDGAKDGQQQQRRKFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIFA 597 +A +QE+RDA+ FR G ++ R+ + ADTFGE G G+Y+LA+AF+K+ +Q SGLVG+ G+ + F + K G+ P+ A Sbjct: 93 MATMQEIRDAVMAFRSAQGG---------------------------EEARRPAVYAADTFGESGQGTGQYYLATAFDKIFIQPSGLVGIIGLHSEAFFLKRMLAKLGVHPQFIA 180
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: A0A372JBQ3_9ACTN (Signal peptide peptidase SppA n=3 Tax=Actinomadura TaxID=1988 RepID=A0A372JBQ3_9ACTN) HSP 1 Score: 72.4 bits (176), Expect = 2.750e-11 Identity = 33/73 (45.21%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 406 KFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIFAREASKWLSS 624 K+T+A A+TFGEGG Y+LASAF++V +Q +G VGLTG+A ++ FF G +K G++P R K +++ Sbjct: 99 KYTVAWAETFGEGGRGTVPYYLASAFDRVFLQPTGEVGLTGVALEEPFFAGALEKAGVQPRFAKRYEYKTMAN 171
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: A0A3D9T528_9ACTN (Signal peptide peptidase A n=1 Tax=Thermomonospora umbrina TaxID=111806 RepID=A0A3D9T528_9ACTN) HSP 1 Score: 72.4 bits (176), Expect = 2.750e-11 Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 406 KFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIFAREASKWLSS 624 K T+A ++TFG+GG Y+LAS FE+V +Q SG VGLTG+A ++ F RG +K GI+P AR K +++ Sbjct: 99 KLTVAWSETFGDGGRGTVPYYLASVFERVYLQPSGEVGLTGVALEEPFLRGALEKVGIEPRFGARHEYKTMAN 171
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Match: A0A8J9RFS0_9CHLO (Protease 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RFS0_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 2.870e-11 Identity = 44/123 (35.77%), Postives = 62/123 (50.41%), Query Frame = 1 Query: 253 LACVQEVRDAITTFRYGHGRAHSGAASSDATDSAGFTSVDGAKDGQQQQRRKFTIAVADTFGEGGPAVG---EYFLASAFEKVLVQKSGLVGLTGIAQQKLFFRGFFDKYGIKPEIFAREASK 612 LA +QE+R+A+T FR ++ + R T+A AD FGE G +G Y+LASAF+KV +Q SGL+ ++G+A F R FFD + +KP ARE K Sbjct: 112 LAQIQELRNAVTDFR------------------------------ERAEGRVMTVAYADAFGEAG--IGGTLSYYLASAFDKVYMQPSGLLSMSGLASSTPFLRRFFDSWKVKPHFVAREEYK 202 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15726.4001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15726.4001.1 >prot_L-elsbetiae_contig15726.4001.1 ID=prot_L-elsbetiae_contig15726.4001.1|Name=mRNA_L-elsbetiae_contig15726.4001.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=209bp MKQTHRKKNRLPDGEIWLDMDLSQPLSNAPPGVDLAFLFGDVQPLNVRDVback to top mRNA from alignment at L-elsbetiae_contig15726:1421..3251- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15726.4001.1 ID=mRNA_L-elsbetiae_contig15726.4001.1|Name=mRNA_L-elsbetiae_contig15726.4001.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1831bp|location=Sequence derived from alignment at L-elsbetiae_contig15726:1421..3251- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15726:1421..3251- >mRNA_L-elsbetiae_contig15726.4001.1 ID=mRNA_L-elsbetiae_contig15726.4001.1|Name=mRNA_L-elsbetiae_contig15726.4001.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1254bp|location=Sequence derived from alignment at L-elsbetiae_contig15726:1421..3251- (Laminarionema elsbetiae ELsaHSoW15)back to top |