prot_L-elsbetiae_contig15726.4000.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15726.4000.1
Unique Nameprot_L-elsbetiae_contig15726.4000.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length42
Homology
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BLAST of mRNA_L-elsbetiae_contig15726.4000.1 vs. uniprot
Match: D7FRH8_ECTSI (Signal peptide peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH8_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 6.500e-8
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0 
Query:    1 EFKNAASNLENKTYSKHERQAMTSLMTSILDDVADAIVASR 41
            E+K+AA +L  K YS HER+AMTSL+TS+LDDVAD + ASR
Sbjct:  139 EYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASR 179
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15726.4000.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FRH8_ECTSI6.500e-865.85Signal peptide peptidase n=2 Tax=Ectocarpus TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15726contigL-elsbetiae_contig15726:596..721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15726.4000.1mRNA_L-elsbetiae_contig15726.4000.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15726 596..721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15726.4000.1 ID=prot_L-elsbetiae_contig15726.4000.1|Name=mRNA_L-elsbetiae_contig15726.4000.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=42bp
EFKNAASNLENKTYSKHERQAMTSLMTSILDDVADAIVASR*
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