mRNA_L-elsbetiae_contig10.40.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: A0A6B7EW12_9PHAE (Ferredoxin:thioredoxin reductase n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EW12_9PHAE) HSP 1 Score: 255 bits (651), Expect = 6.490e-86 Identity = 123/129 (95.35%), Postives = 126/129 (97.67%), Query Frame = 1 Query: 1 MNLKKTTKLTQNKKMDKGTYIKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNLIYNLYT 387 M+LKKTTKL Q KK+DKGTYIKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYK+KY LPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNLIYNLYT Sbjct: 1 MDLKKTTKLAQ-KKIDKGTYIKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKEKYALPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNLIYNLYT 128
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: D1J7D0_ECTSI (Ferredoxin:thioredoxin reductase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7D0_ECTSI) HSP 1 Score: 238 bits (606), Expect = 4.900e-79 Identity = 111/129 (86.05%), Postives = 121/129 (93.80%), Query Frame = 1 Query: 1 MNLKKTTKLTQNKKMDKGTYIKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNLIYNLYT 387 M LKKT K+T N K+DKGT IKEMH F+ELYA+KTNTFFC+DPSITSVI+AGLADYK+KY LPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRP++S +SQTQKIPLSTVYHNLIYNLYT Sbjct: 1 MTLKKTKKVTLNNKLDKGTRIKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNKYDLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPENSESSQTQKIPLSTVYHNLIYNLYT 129
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: A0A5A4MHM1_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MHM1_9PHAE) HSP 1 Score: 235 bits (599), Expect = 5.730e-78 Identity = 109/129 (84.50%), Postives = 120/129 (93.02%), Query Frame = 1 Query: 1 MNLKKTTKLTQNKKMDKGTYIKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNLIYNLYT 387 M+LK T K+ Q K++KGT IKEMH F+ELYA+KTNTFFCLDPSITSVII+GLADYK++Y LPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRP+D +ASQTQKIPLSTVYHNLIYNLYT Sbjct: 1 MDLKNTKKVAQKNKLEKGTRIKEMHNFAELYAKKTNTFFCLDPSITSVIISGLADYKERYELPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPEDPDASQTQKIPLSTVYHNLIYNLYT 129
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: A0A1I9LVX2_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVX2_9PHAE) HSP 1 Score: 230 bits (586), Expect = 5.500e-76 Identity = 109/129 (84.50%), Postives = 117/129 (90.70%), Query Frame = 1 Query: 1 MNLKKTTKLTQNKKMDKGTYIKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNLIYNLYT 387 M LKK TQN K++K T +KEMH F+ELYA+KTNTFFCLDPSITSVIIAGLADYK+KY LPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRP+DS ASQTQKI LSTVY+NLIYNLYT Sbjct: 1 MELKKIKNTTQNNKIEKSTRLKEMHNFAELYAKKTNTFFCLDPSITSVIIAGLADYKNKYKLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPEDSEASQTQKISLSTVYNNLIYNLYT 129
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: A0A0S0GLW6_COSCS (Ferredoxin-thioredoxin reductase, catalytic chain n=28 Tax=Laminariales TaxID=2886 RepID=A0A0S0GLW6_COSCS) HSP 1 Score: 183 bits (465), Expect = 9.730e-58 Identity = 79/103 (76.70%), Postives = 95/103 (92.23%), Query Frame = 1 Query: 61 IKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNL 369 +KEMH F+E+YA++TNTFFCLDPSITSVII GLA YKD+Y +PLCPCRNFRSE+ EIELN+W+CPCV+MRERKECHCKLFV+P+DS+AS+TQKI L T+Y NL Sbjct: 13 LKEMHNFAEIYAKQTNTFFCLDPSITSVIITGLATYKDQYGVPLCPCRNFRSEKAEIELNYWVCPCVSMRERKECHCKLFVQPNDSSASETQKISLDTIYKNL 115
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: A0A8F0JXX6_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0JXX6_9PHAE) HSP 1 Score: 180 bits (456), Expect = 2.290e-56 Identity = 77/103 (74.76%), Postives = 95/103 (92.23%), Query Frame = 1 Query: 61 IKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNL 369 +KEMHTF+++YA++TNTFFCLDPSITSVII GLA YKDK+ +PLCPCRNFRSE+ EIELN+W+CPCV+MRERKECHCKLFV+P+DS+AS++QKI L T+Y L Sbjct: 13 LKEMHTFAQIYAKQTNTFFCLDPSITSVIITGLATYKDKHGVPLCPCRNFRSEKAEIELNYWVCPCVSMRERKECHCKLFVQPNDSSASKSQKISLDTIYETL 115
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: A0A8F0FAQ0_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAQ0_9PHAE) HSP 1 Score: 166 bits (419), Expect = 9.910e-51 Identity = 69/103 (66.99%), Postives = 84/103 (81.55%), Query Frame = 1 Query: 61 IKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNL 369 + MH F+E YA++TNTFFC DPSITS++I GLA YKDKY +PLCPCRN+ +E EIELN+WICPCVAMRERKECHCKLF+ PDD S+ QKI + +Y+NL Sbjct: 13 VNAMHKFAETYAKQTNTFFCFDPSITSIVITGLATYKDKYGVPLCPCRNYYNEEAEIELNYWICPCVAMRERKECHCKLFINPDDEYVSENQKIDIDIIYNNL 115
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: A0A2R4QPY4_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY4_9PHAE) HSP 1 Score: 164 bits (414), Expect = 5.720e-50 Identity = 71/103 (68.93%), Postives = 88/103 (85.44%), Query Frame = 1 Query: 61 IKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNL 369 IK M F+E YA++TNTFF +DPSITS+II GLA+YKD+Y +PLCPCRN+ +E EIELN+WICPCV+MRERKECHC+LFV+P +S ASQ+QKI L T+Y NL Sbjct: 13 IKAMQHFAETYAKQTNTFFSIDPSITSIIITGLANYKDRYKVPLCPCRNYHNEEAEIELNYWICPCVSMRERKECHCRLFVQPTESYASQSQKISLDTIYKNL 115
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: A0A141BSI2_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSI2_9PHAE) HSP 1 Score: 162 bits (410), Expect = 2.330e-49 Identity = 70/103 (67.96%), Postives = 88/103 (85.44%), Query Frame = 1 Query: 61 IKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNL 369 IK M F+E YA++TNTFF LDPSITS+II GLA YKD++ +PLCPCRN+ +E EIELN+WICPC++MRERKECHCKLFV+P +S AS++QKI L T+Y+NL Sbjct: 13 IKAMQQFAETYAKQTNTFFSLDPSITSIIITGLATYKDRHKVPLCPCRNYHNEEAEIELNYWICPCISMRERKECHCKLFVQPTESYASKSQKIDLDTIYNNL 115
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Match: A0A8F0F757_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F757_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.510e-47 Identity = 66/103 (64.08%), Postives = 85/103 (82.52%), Query Frame = 1 Query: 61 IKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKDKYTLPLCPCRNFRSERVEIELNFWICPCVAMRERKECHCKLFVRPDDSNASQTQKIPLSTVYHNL 369 ++ MH F++ Y ++TNTFFCLDP+ITSV+I GLA+YK KY +PLCPCRN+ +E+ EI+LN+WICPCVAMRERKECHCKLF+ PD S+ Q+I + TVY NL Sbjct: 17 LESMHKFAQNYTKQTNTFFCLDPAITSVVITGLANYKSKYGVPLCPCRNYHNEKDEIDLNYWICPCVAMRERKECHCKLFLTPDQKFVSEKQEIDIETVYKNL 119 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10.40.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig10.40.1 >prot_L-elsbetiae_contig10.40.1 ID=prot_L-elsbetiae_contig10.40.1|Name=mRNA_L-elsbetiae_contig10.40.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp MNLKKTTKLTQNKKMDKGTYIKEMHTFSELYAQKTNTFFCLDPSITSVIIback to top mRNA from alignment at L-elsbetiae_contig10:75277..75669+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig10.40.1 ID=mRNA_L-elsbetiae_contig10.40.1|Name=mRNA_L-elsbetiae_contig10.40.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=393bp|location=Sequence derived from alignment at L-elsbetiae_contig10:75277..75669+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig10:75277..75669+ >mRNA_L-elsbetiae_contig10.40.1 ID=mRNA_L-elsbetiae_contig10.40.1|Name=mRNA_L-elsbetiae_contig10.40.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=786bp|location=Sequence derived from alignment at L-elsbetiae_contig10:75277..75669+ (Laminarionema elsbetiae ELsaHSoW15)back to top |