mRNA_L-elsbetiae_contig15725.3999.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15725.3999.1
Unique NamemRNA_L-elsbetiae_contig15725.3999.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig15725.3999.1 vs. uniprot
Match: D7G0E9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0E9_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 1.180e-21
Identity = 55/78 (70.51%), Postives = 57/78 (73.08%), Query Frame = 1
Query:  859 FAFVPTAIEXXXXXXXXXXXXXXXXXXEDTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQDLAS 1092
            F+FVP AIE                  EDTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQ  A+
Sbjct:  277 FSFVPAAIETPTARAPPAS--------EDTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQGAAA 346          
BLAST of mRNA_L-elsbetiae_contig15725.3999.1 vs. uniprot
Match: W7TVA3_9STRA (Branchpoint-bridging protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVA3_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 8.510e-12
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  943 DTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQDLASWPAMRELKKLYL 1128
            DTYAYEEEQER  +L++LH PM+ WF+    ++++ER+G +P FWQDL +W   R ++KLYL
Sbjct:    9 DTYAYEEEQERKALLQSLHGPMKTWFHGGEASSIKERFGPYPTFWQDLLTWEHTRVVQKLYL 70          
BLAST of mRNA_L-elsbetiae_contig15725.3999.1 vs. uniprot
Match: K8Z468_NANGC (Branchpoint-bridging protein (Fragment) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z468_NANGC)

HSP 1 Score: 77.8 bits (190), Expect = 1.060e-11
Identity = 33/62 (53.23%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  943 DTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQDLASWPAMRELKKLYL 1128
            DTYAYEEEQER  +L++LH PM+ WF+    ++++ER+G +P FWQDL +W   R ++KLYL
Sbjct:    9 DTYAYEEEQERKALLQSLHGPMKTWFHGGEASSIKERFGPYPTFWQDLLTWEHTRVVQKLYL 70          
BLAST of mRNA_L-elsbetiae_contig15725.3999.1 vs. uniprot
Match: A0A662YI91_9STRA (Branchpoint-bridging protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YI91_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 5.700e-9
Identity = 36/84 (42.86%), Postives = 49/84 (58.33%), Query Frame = 1
Query:  943 DTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQDLASWPAMRELKKLYLVEVERRENPEAAKANDAITAAD 1194
            D Y YEE+QER  M+KN H PM++WF +    A  E+YG FP+FWQ+L +W   RE+ K ++   E  E+  A    D  T  D
Sbjct:   53 DEYHYEEQQEREAMMKNYHHPMKQWFRQKPSLA--EKYGPFPLFWQELKTWEPYREVLKTFIRFTEHGEDA-ADPLKDETTTQD 133          
BLAST of mRNA_L-elsbetiae_contig15725.3999.1 vs. uniprot
Match: A0A067BQ51_SAPPC (Branchpoint-bridging protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BQ51_SAPPC)

HSP 1 Score: 67.4 bits (163), Expect = 2.030e-8
Identity = 35/83 (42.17%), Postives = 51/83 (61.45%), Query Frame = 1
Query:  943 DTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQDLASWPAMRELKKLYLVEVERRENPEAAKANDAITAA 1191
            DTY YEE+QER TM++    PM++W+      A +  +G+FP+FWQDL SW   R++ +LYL     R    ++K +DA  AA
Sbjct:   12 DTYEYEEQQERETMMRISFLPMKRWYLSSPDVAAK--FGSFPVFWQDLKSWAPYRDVNRLYL-----RATDGSSKGDDAAPAA 87          
BLAST of mRNA_L-elsbetiae_contig15725.3999.1 vs. uniprot
Match: A0A6G0WMD9_9STRA (Branchpoint-bridging protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMD9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.590e-6
Identity = 29/73 (39.73%), Postives = 47/73 (64.38%), Query Frame = 1
Query:  940 EDTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQDLASWPAMRELKKLYLVEVER-RENP 1155
            +  Y  EE QER  +++   QPM+KW+ ++   +  E++G FPMFWQDL +W   R++++L+L   E+  ENP
Sbjct:    8 DSAYDKEELQEREALMRTTFQPMKKWYMENPECS--EKFGPFPMFWQDLKTWDPYRDVQRLFLKATEKSNENP 78          
BLAST of mRNA_L-elsbetiae_contig15725.3999.1 vs. uniprot
Match: D8LWM3_BLAHO (Branchpoint-bridging protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LWM3_BLAHO)

HSP 1 Score: 56.2 bits (134), Expect = 5.180e-5
Identity = 24/64 (37.50%), Postives = 42/64 (65.62%), Query Frame = 1
Query:  958 EEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQDLASWPAMRELKKLYLVEVERRE 1149
            E+  E  + ++  ++ M+KW+N +    ++E+YG FPMFWQDLA W    + KK+Y+ E E+++
Sbjct:   13 EQSMEEESYMQLNYKDMKKWYNDN--KELKEKYGRFPMFWQDLAEWDHWSDFKKIYMKEKEKKD 74          
BLAST of mRNA_L-elsbetiae_contig15725.3999.1 vs. uniprot
Match: B8C249_THAPS (Branchpoint-bridging protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C249_THAPS)

HSP 1 Score: 56.2 bits (134), Expect = 8.660e-5
Identity = 28/80 (35.00%), Postives = 42/80 (52.50%), Query Frame = 1
Query:  958 EEEQERLTMLKNLHQPMRKWFNKDGGAAMRERYGNFPMFWQDLASWPAMRELKKLYLVEVE---RRENPEAAKANDAITA 1188
            EE  E +  ++  H PM+ W+N      +  +YG+FP+FWQDL  W   +E+++ YL   E   R      A+A D I A
Sbjct:    8 EEAAELMATMRAEHVPMKSWYNNPSHIGLHSKYGDFPLFWQDLRGWDGWKEVRREYLRFTEGGGRSLESAQAQATDGIDA 87          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15725.3999.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G0E9_ECTSI1.180e-2170.51Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
W7TVA3_9STRA8.510e-1253.23Branchpoint-bridging protein n=1 Tax=Nannochlorops... [more]
K8Z468_NANGC1.060e-1153.23Branchpoint-bridging protein (Fragment) n=2 Tax=Mo... [more]
A0A662YI91_9STRA5.700e-942.86Branchpoint-bridging protein (Fragment) n=2 Tax=No... [more]
A0A067BQ51_SAPPC2.030e-842.17Branchpoint-bridging protein n=2 Tax=Saprolegnia T... [more]
A0A6G0WMD9_9STRA4.590e-639.73Branchpoint-bridging protein n=1 Tax=Aphanomyces e... [more]
D8LWM3_BLAHO5.180e-537.50Branchpoint-bridging protein n=1 Tax=Blastocystis ... [more]
B8C249_THAPS8.660e-535.00Branchpoint-bridging protein n=1 Tax=Thalassiosira... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15725contigL-elsbetiae_contig15725:242..3728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score109.4
Seed ortholog evalue4.2e-21
Seed eggNOG ortholog2880.D7G0E9
Preferred nameSF1
KEGG koko:K13095,ko:K13126
KEGG Pathwayko03013,ko03015,ko03018,map03013,map03015,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000243,GO:0000245,GO:0000375,GO:0000377,GO:0000380,GO:0000389,GO:0000398,GO:0001101,GO:0003006,GO:0003674,GO:0003676,GO:0003712,GO:0003714,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007275,GO:0007530,GO:0007548,GO:0008150,GO:0008152,GO:0008285,GO:0008380,GO:0008406,GO:0008584,GO:0009719,GO:0009725,GO:0009737,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010467,GO:0010556,GO:0010558,GO:0010605,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0019216,GO:0019218,GO:0019219,GO:0019222,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030238,GO:0030575,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033327,GO:0033993,GO:0034622,GO:0034641,GO:0036002,GO:0042127,GO:0042221,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045131,GO:0045137,GO:0045292,GO:0045934,GO:0046483,GO:0046546,GO:0046661,GO:0046890,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048660,GO:0048662,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097305,GO:0140110,GO:1901360,GO:1901363,GO:1901700,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2001141
EggNOG free text desc.pre-mRNA branch point binding
EggNOG OGsCOG5176@1,KOG0119@2759
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03041
Ec32 ortholog descriptionSAP domain
Ec32 orthologEc-02_000660.1
Exons3
Model size1262
Cds size1260
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15725.3999.1prot_L-elsbetiae_contig15725.3999.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15725 242..3728 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815645.9991906-CDS-L-elsbetiae_contig15725:241..12101622815645.9991906-CDS-L-elsbetiae_contig15725:241..1210Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15725 242..1210 +
1691683011.7755709-CDS-L-elsbetiae_contig15725:241..12101691683011.7755709-CDS-L-elsbetiae_contig15725:241..1210Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15725 242..1210 +
1622815646.010427-CDS-L-elsbetiae_contig15725:2251..23621622815646.010427-CDS-L-elsbetiae_contig15725:2251..2362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15725 2252..2362 +
1691683011.7934299-CDS-L-elsbetiae_contig15725:2251..23621691683011.7934299-CDS-L-elsbetiae_contig15725:2251..2362Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15725 2252..2362 +
1622815646.022635-CDS-L-elsbetiae_contig15725:3548..37281622815646.022635-CDS-L-elsbetiae_contig15725:3548..3728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15725 3549..3728 +
1691683011.804692-CDS-L-elsbetiae_contig15725:3548..37281691683011.804692-CDS-L-elsbetiae_contig15725:3548..3728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15725 3549..3728 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15725.3999.1

>prot_L-elsbetiae_contig15725.3999.1 ID=prot_L-elsbetiae_contig15725.3999.1|Name=mRNA_L-elsbetiae_contig15725.3999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=420bp
AVLLERLTEALGSPAPAAAAAAAEAGDEAVENETTAGTATPAVEEAVPAP
TVESPVGTPRTIRGRRSAAAAEAAAAEAEAEAEAAEAEAEAAAAEAAAEE
QPEGAAGATAPDGALADEAEDITQAASAAMEGIRTAAAANGVVCVNATEP
QDGDVAVAAAVPDTAADAAVDAADAAANDPPAAEAANGAAGGSGGGGLQA
MDVDGGDTVTAAEDGGEEAAPAPSAKGPGPAEPMETGSPAPAPAAEAEPA
AEAAPAPASAEPVAAAPPAAAPPAPAPAAAAASSSPFAFVPTAIEAPTAR
APPPSAGGAAASSEDTYAYEEEQERLTMLKNLHQPMRKWFNKDGGAAMRE
RYGNFPMFWQDLASWPAMRELKKLYLVEVERRENPEAAKANDAITAADDA
AAAAAAAASAAKASGAAAVA
back to top

mRNA from alignment at L-elsbetiae_contig15725:242..3728+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15725.3999.1 ID=mRNA_L-elsbetiae_contig15725.3999.1|Name=mRNA_L-elsbetiae_contig15725.3999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3487bp|location=Sequence derived from alignment at L-elsbetiae_contig15725:242..3728+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGTTTTGCTGGAGAGGTTGACGGAAGCGCTTGGATCACCCGCACCAGC GGCGGCCGCGGCCGCAGCCGAGGCCGGTGACGAAGCGGTCGAAAATGAGA CGACCGCAGGCACGGCGACACCGGCGGTGGAAGAGGCCGTGCCGGCCCCG ACCGTCGAGTCTCCGGTAGGAACCCCTCGGACCATACGCGGCCGGCGGTC GGCGGCGGCGGCAGAGGCGGCGGCGGCGGAGGCAGAGGCAGAGGCAGAGG CGGCAGAGGCGGAGGCGGAGGCGGCAGCGGCAGAGGCAGCGGCCGAAGAA CAGCCGGAGGGCGCGGCCGGGGCTACTGCACCCGACGGAGCCTTGGCCGA CGAAGCCGAGGACATAACGCAGGCCGCCAGCGCCGCGATGGAAGGCATCC GGACGGCGGCGGCCGCGAACGGCGTGGTTTGCGTGAACGCCACCGAGCCG CAGGACGGCGACGTGGCCGTCGCGGCGGCAGTCCCCGACACCGCCGCCGA TGCAGCTGTCGATGCCGCCGATGCCGCCGCCAACGACCCCCCCGCTGCGG AGGCCGCCAACGGAGCAGCCGGCGGCAGCGGCGGCGGCGGCCTTCAGGCC ATGGACGTGGATGGCGGCGACACGGTTACAGCTGCGGAAGATGGCGGCGA GGAGGCGGCGCCCGCGCCCTCGGCGAAAGGACCGGGGCCGGCAGAACCGA TGGAGACCGGCTCGCCGGCGCCCGCACCGGCCGCAGAGGCAGAACCAGCC GCAGAGGCAGCACCAGCGCCTGCATCGGCAGAGCCGGTGGCAGCAGCACC ACCAGCAGCAGCACCACCAGCACCAGCACCAGCGGCAGCAGCAGCTTCCT CTTCACCGTTCGCGTTCGTCCCTACCGCGATCGAGGCGCCCACCGCGCGC GCGCCGCCGCCCAGCGCCGGCGGGGCCGCGGCGAGCTCAGAGGACACTTA CGCCTACGAGGAAGAGCAGGTTCGGGCGCTCGTGTGTTGGCAGTGTTGTT GTTATTGTTGTTGTTAACTGTATTGTTGCTGTTGCTGTTGCTGCTGCTGC TGCTGCTGTTGTTGTTGTTGCTGCTGTTGTTACTGTTTTGTTGCTGCTGT TGTTGGTGTTCTGTTGTCGATGTTGTTTTGTCCATGGTGTTGCCAAATGC TGTTGATGTTGTCGTTGTCGTTGTTGTTGTTCGCTTTGGAAATAAACCAG AAAAGGTGAGAGAAGTAACCCATCCGCAGAATAGACGAGACTCCTCGCGT TAAAGTACCAATTCCATACGGTAACGTAATACGTATGTAGGTGCGTCTTT ATTTCTCTTATTTTTTGACCATTTTGGATAAAAGGGTCAGTATGTAAAGA TGCGATAGAGAAGATCCCTCGTGCAGACCGTGCTCTCCCCCGAGCTTTCG AACCACACACTGCCCAAGAGGCTAACGCGGTGTAAAAGGTAACGCCCCCA AACACCTCTTTTCACGTTCACGGTATATAAGTTATCCCGTGATAGCAGGA ATCGACCGCGTCAGTGTTGGGGTAGTACGGGCTTACGAGAGTGTACTGGA TAGAGGGATCGGAACGGTTTTTACTGTTACATAAGACGACGACAACAACA CGACCAGGGGGTCACCAGGAAAATGCGGGGCTAGATGGATACACTGCCCC AAACTTCGATCAAGCCGATCGGGGGAGCGCCTTCGCGAAGAACTCCTGTC CAGAAGGGAATGGAAAAAACAGGGGGTTCCGTAACTGCAACCGTAACCTC AACCCAAGCCGACCCCCCAATACAAATAGCCGTTTCCACACCTTATCCCA TATGATTTCTTACTGTAAAACTTGCGAAGGCTGCTGCGCTGGGGTGGCCT TTTGTGTACGATTTAGCATGGGCTCGCTACTACTGCTGTCTGTTACCCTA CATGTTGTGACGCAACTGTTCGAGTGTCTTGTGGTTTCGATCTTGCATCG TGGTCTACTGACGGGTACTGCCTTTCCCCCGCGCACCCTTCGATCCCGGA CTCCCCCCAGGAACGCCTCACTATGCTCAAGAACCTGCACCAGCCCATGC GGAAGTGGTTCAACAAGGATGGGGGCGCCGCGATGCGGGAGCGCTACGGC AACTTTCCCATGTTCTGGCAGGTATTTACGCACATACAATGTTGGGCTTC CATGCATATATACTACGAGTAAGTGGAAGGATACGGGCTACTAGGTTGTG TAGTAGCCTGTGGCTACTTCGCGCGTTTGCGGTGCTCGAACTACATACAG GCACGGCGTACTTTGACGGCGGGGGGAACACGTGACAGCTGGCACGCTCA AGATGCTAGCTGCTCGATAGACACTCCGCACGGGACTGTCATGCTGGATG CTCGATAGACACGCCGCACGGGACTGTCATGTCGTGCGTGTGTGGTGTGT TGGTGTTTTGTTTTTGCTCCCCGCGAAAAGGGTATGTAGATGGAAGCTAC AAATAGAGAGAGGAGGCGTTGGCACACATGCGGCATCAGGTGAAACTAAG TAGTGACCGGTGGCCCGGGGCGTGAGATGGGCGACAGTTTAAAAAAAATA AACAATGAATCAAAGATGGAACCTACCCCACACTGGAGCAAGGACTCGAT ATGAGGTTCAAACGGTATTCCATAAAGAGACGTAATATTTGGCGAAGCGA GCGGAAAAACAACCTAAAATATCAGAAGAGTTCAGCATCTCCCCTGCAAA GATTTGAAGATTTTCGAAGTCGGCCAACAAGTATTCAGGCGGGTAGAGCC CGCCGTGATGCCGTTATGTTGCCATCTACTTCAAAATAGAAGATTTTGTT CCAGTTTTTGGTCTCATTTCTCGAGGACCAGATGATAACTTTAATTTTTG CAAAACGATGCTTTCGGCGCTGTGCTGTGCGCCCTCTGGACGCACGGGGG GCCTGGAGCAGAGCTTCCGTATGCGGCACAAGATAACAACCCCCCTGGAC CGATTTCCAAAGCTCAAGTACTCAACAGCGAGAGAGAGTGTCGGTCCCGA AAAGGGTGGCGCCGTTGGAGGAAATATCTCAACCAAGAGCTGTCCGAAAA CGTGTCGTTTGGTAGTAGAATCATATGCTCGTTGGGGAGTAACCGTGCTT TGAAAAACGGTCCAGGGGGTATGTTATCTTGTGTGGTTAACCCCCTCGGG GCGCCGAGGTCCGCACTTGAACTCTTGTTCGTCGTCTGGTGGCAGGTACA TCTGTGCGTCGTGCCACGAAATACTGACCGTCGACCCCCCCTCCGGCTTG AATTTTGGTCGAATCTCTACTGCGTCCCCCATCTCTCTTTGCCCTTTTGT CTGTCAGGACTTGGCGTCGTGGCCGGCAATGCGAGAGCTCAAGAAGCTGT ACCTCGTGGAGGTGGAGCGCCGCGAGAATCCGGAGGCGGCCAAGGCTAAC GATGCCATCACCGCCGCCGACGACGCCGCCGCCGCCGCCGCCGCTGCTGC TTCTGCTGCCAAGGCTAGCGGAGCTGCCGCCGTCGCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig15725:242..3728+

>mRNA_L-elsbetiae_contig15725.3999.1 ID=mRNA_L-elsbetiae_contig15725.3999.1|Name=mRNA_L-elsbetiae_contig15725.3999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2520bp|location=Sequence derived from alignment at L-elsbetiae_contig15725:242..3728+ (Laminarionema elsbetiae ELsaHSoW15)
GCGGTTTTGCTGGAGAGGTTGACGGAAGCGCTTGGATCACCCGCACCAGC
GGCGGCCGCGGCCGCAGCCGAGGCCGGTGACGAAGCGGTCGAAAATGAGA
CGACCGCAGGCACGGCGACACCGGCGGTGGAAGAGGCCGTGCCGGCCCCG
ACCGTCGAGTCTCCGGTAGGAACCCCTCGGACCATACGCGGCCGGCGGTC
GGCGGCGGCGGCAGAGGCGGCGGCGGCGGAGGCAGAGGCAGAGGCAGAGG
CGGCAGAGGCGGAGGCGGAGGCGGCAGCGGCAGAGGCAGCGGCCGAAGAA
CAGCCGGAGGGCGCGGCCGGGGCTACTGCACCCGACGGAGCCTTGGCCGA
CGAAGCCGAGGACATAACGCAGGCCGCCAGCGCCGCGATGGAAGGCATCC
GGACGGCGGCGGCCGCGAACGGCGTGGTTTGCGTGAACGCCACCGAGCCG
CAGGACGGCGACGTGGCCGTCGCGGCGGCAGTCCCCGACACCGCCGCCGA
TGCAGCTGTCGATGCCGCCGATGCCGCCGCCAACGACCCCCCCGCTGCGG
AGGCCGCCAACGGAGCAGCCGGCGGCAGCGGCGGCGGCGGCCTTCAGGCC
ATGGACGTGGATGGCGGCGACACGGTTACAGCTGCGGAAGATGGCGGCGA
GGAGGCGGCGCCCGCGCCCTCGGCGAAAGGACCGGGGCCGGCAGAACCGA
TGGAGACCGGCTCGCCGGCGCCCGCACCGGCCGCAGAGGCAGAACCAGCC
GCAGAGGCAGCACCAGCGCCTGCATCGGCAGAGCCGGTGGCAGCAGCACC
ACCAGCAGCAGCACCACCAGCACCAGCACCAGCGGCAGCAGCAGCTTCCT
CTTCACCGTTCGCGTTCGTCCCTACCGCGATCGAGGCGCCCACCGCGCGC
GCGCCGCCGCCCAGCGCCGGCGGGGCCGCGGCGAGCTCAGAGGACACTTA
CGCCTACGAGGAAGAGCAGGCGGTTTTGCTGGAGAGGTTGACGGAAGCGC
TTGGATCACCCGCACCAGCGGCGGCCGCGGCCGCAGCCGAGGCCGGTGAC
GAAGCGGTCGAAAATGAGACGACCGCAGGCACGGCGACACCGGCGGTGGA
AGAGGCCGTGCCGGCCCCGACCGTCGAGTCTCCGGTAGGAACCCCTCGGA
CCATACGCGGCCGGCGGTCGGCGGCGGCGGCAGAGGCGGCGGCGGCGGAG
GCAGAGGCAGAGGCAGAGGCGGCAGAGGCGGAGGCGGAGGCGGCAGCGGC
AGAGGCAGCGGCCGAAGAACAGCCGGAGGGCGCGGCCGGGGCTACTGCAC
CCGACGGAGCCTTGGCCGACGAAGCCGAGGACATAACGCAGGCCGCCAGC
GCCGCGATGGAAGGCATCCGGACGGCGGCGGCCGCGAACGGCGTGGTTTG
CGTGAACGCCACCGAGCCGCAGGACGGCGACGTGGCCGTCGCGGCGGCAG
TCCCCGACACCGCCGCCGATGCAGCTGTCGATGCCGCCGATGCCGCCGCC
AACGACCCCCCCGCTGCGGAGGCCGCCAACGGAGCAGCCGGCGGCAGCGG
CGGCGGCGGCCTTCAGGCCATGGACGTGGATGGCGGCGACACGGTTACAG
CTGCGGAAGATGGCGGCGAGGAGGCGGCGCCCGCGCCCTCGGCGAAAGGA
CCGGGGCCGGCAGAACCGATGGAGACCGGCTCGCCGGCGCCCGCACCGGC
CGCAGAGGCAGAACCAGCCGCAGAGGCAGCACCAGCGCCTGCATCGGCAG
AGCCGGTGGCAGCAGCACCACCAGCAGCAGCACCACCAGCACCAGCACCA
GCGGCAGCAGCAGCTTCCTCTTCACCGTTCGCGTTCGTCCCTACCGCGAT
CGAGGCGCCCACCGCGCGCGCGCCGCCGCCCAGCGCCGGCGGGGCCGCGG
CGAGCTCAGAGGACACTTACGCCTACGAGGAAGAGCAGGAACGCCTCACT
ATGCTCAAGAACCTGCACCAGCCCATGCGGAAGTGGTTCAACAAGGATGG
GGGCGCCGCGATGCGGGAGCGCTACGGCAACTTTCCCATGTTCTGGCAGG
AACGCCTCACTATGCTCAAGAACCTGCACCAGCCCATGCGGAAGTGGTTC
AACAAGGATGGGGGCGCCGCGATGCGGGAGCGCTACGGCAACTTTCCCAT
GTTCTGGCAGGACTTGGCGTCGTGGCCGGCAATGCGAGAGCTCAAGAAGC
TGTACCTCGTGGAGGTGGAGCGCCGCGAGAATCCGGAGGCGGCCAAGGCT
AACGATGCCATCACCGCCGCCGACGACGCCGCCGCCGCCGCCGCCGCTGC
TGCTTCTGCTGCCAAGGCTAGCGGAGCTGCCGCCGTCGCCGACTTGGCGT
CGTGGCCGGCAATGCGAGAGCTCAAGAAGCTGTACCTCGTGGAGGTGGAG
CGCCGCGAGAATCCGGAGGCGGCCAAGGCTAACGATGCCATCACCGCCGC
CGACGACGCCGCCGCCGCCGCCGCCGCTGCTGCTTCTGCTGCCAAGGCTA
GCGGAGCTGCCGCCGTCGCC
back to top