prot_L-elsbetiae_contig15704.3987.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15704.3987.1
Unique Nameprot_L-elsbetiae_contig15704.3987.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length338
Homology
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BLAST of mRNA_L-elsbetiae_contig15704.3987.1 vs. uniprot
Match: D7G5Z1_ECTSI (TOG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Z1_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 3.050e-10
Identity = 83/254 (32.68%), Postives = 120/254 (47.24%), Query Frame = 0 
Query:   99 DAEAEASGLAERGH--VSCGEEAAAPLISEGHPALCPKTELGDYPEENLPESDAADPAGGGIAEAVDLPVVD----LSRRTPAA-----GDGSAAGEKGVEY----GAKKPPGETPALLPEEAVEAGKLATTKDGGAKAEGAEDCAKEVARKPGGKTLAREKAVMNLGVSAIVGGRVKP-IEVSKAGVAGGGAEPGGAAIGR-LQISEHERGMAGAPQGDIFDVVALTTDELHASSDVSNEVQGVCAERETDDW 335
            + + + S +  RG     C E+A A   ++G P  CP+  +         ESD   PA  G A  +  P+ D    ++ R P A      D S  G  G E+    G +K  GE P    E    +G L    DG A+ +  E+ + E  +  G    A +  + +  V A+    V   ++VSK   A GG +   A +GR +Q+S  ER MAGAPQG+IFDVVALT+ E+ AS DVS +++ V       DW
Sbjct:  239 EGDVKVSSVGARGEEGARCWEDAVATTPAKGTPDQCPERHV---------ESDDEGPAATGGAVMLGEPITDSKVLMAVRMPEATASAEADVSCGGGAGTEHEASGGLEKASGEVPVF--EATAASGGLVVEVDG-ARLQAIEEVSSEERQMAG----APQGEIFD--VVALTSSEVPASVDVSKDLEAVGGTDERLAVLGRDVQVSSEERQMAGAPQGEIFDVVALTSSEVPASVDVSKDLEAVRTHSGVTDW 474
[Close]
BLAST of mRNA_L-elsbetiae_contig15704.3987.1 vs. uniprot
Match: D7G7P4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7P4_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 1.280e-6
Identity = 31/61 (50.82%), Postives = 39/61 (63.93%), Query Frame = 0 
Query:  275 AEPGGAAIGRLQISEHERGMAGAPQGDIFDVVALTTDELHASSDVSNEVQGVCAERETDDW 335
            A PG   I   ++S  ER MAGAPQG+IFDVVALT+ E+ AS DVS +++ V       DW
Sbjct:    9 AAPGALTIKTRKVSSEERQMAGAPQGEIFDVVALTSSEVPASVDVSKDLEAVRIRSGVTDW 69
[Close]
BLAST of mRNA_L-elsbetiae_contig15704.3987.1 vs. uniprot
Match: D7FH72_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH72_ECTSI)

HSP 1 Score: 55.5 bits (132), Expect = 9.500e-5
Identity = 28/59 (47.46%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:  277 PGGAAIGRLQISEHERGMAGAPQGDIFDVVALTTDELHASSDVSNEVQGVCAERETDDW 335
            PG   I   ++S  ER MAGAPQG IFDVVAL + E+ AS D+S +++ V       DW
Sbjct:  695 PGSLTIKTRKVSSEERQMAGAPQGQIFDVVALKSSEVPASVDISKDLEAVRIRSGVTDW 753
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15704.3987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G5Z1_ECTSI3.050e-1032.68TOG domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G7P4_ECTSI1.280e-650.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FH72_ECTSI9.500e-547.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..337
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15704contigL-elsbetiae_contig15704:1357..3962 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15704.3987.1mRNA_L-elsbetiae_contig15704.3987.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15704 768..4064 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15704.3987.1 ID=prot_L-elsbetiae_contig15704.3987.1|Name=mRNA_L-elsbetiae_contig15704.3987.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=338bp
MKSLIPALACGAASKLPEAKEAAWKASERVLSRRRGGGGGGGVGGGRRRT
APSKASAEAGADGRSSLLRSATTEELQQQQHQQQQEEKEEKEEEKDETDA
EAEASGLAERGHVSCGEEAAAPLISEGHPALCPKTELGDYPEENLPESDA
ADPAGGGIAEAVDLPVVDLSRRTPAAGDGSAAGEKGVEYGAKKPPGETPA
LLPEEAVEAGKLATTKDGGAKAEGAEDCAKEVARKPGGKTLAREKAVMNL
GVSAIVGGRVKPIEVSKAGVAGGGAEPGGAAIGRLQISEHERGMAGAPQG
DIFDVVALTTDELHASSDVSNEVQGVCAERETDDWPG*
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