mRNA_L-elsbetiae_contig157.3984.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: D8LC75_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC75_ECTSI) HSP 1 Score: 238 bits (608), Expect = 2.980e-76 Identity = 174/234 (74.36%), Postives = 181/234 (77.35%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYDQAKGKSDEEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMDDEAKTEEATAKLQAAIEQGNKECEERTRKXXXXXXXXXQAAKSGNISAK-QAKTATGGTPGGDKGAAKGKGPSSXXXXXXXXXXXXXXXXXXXXXXXXXEFVYIPEADLAAAGGDGGSGFKNDGSFLEMMKK-LEKSGSGGKPSASANVGAKAIAAK 703 MGRYTTVQAYSDNNPKLVHVSYDQAKGK ++EGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRR+EMHRVAAMD+EA+ EATAKL AIE+G ECEERTRK XXXXXXXX QAKT GA PS XXXXXXXXXXXXXXXXXX EFVYIPEADLA AGGDGGSGFKNDGSFLEMMKK LEKS S KPSASA KA+ AK Sbjct: 1 MGRYTTVQAYSDNNPKLVHVSYDQAKGKDNDEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRREMHRVAAMDEEAQVAEATAKLHEAIEKGKNECEERTRKKXXXXXXXXXXXXXXXXXXXXQAKT----------GAXXXXXPSXXXXXXXXXXXXXXXXXXXED-----EFVYIPEADLATAGGDGGSGFKNDGSFLEMMKKELEKSESSDKPSASAAGTGKAVVAK 219
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: A0A835YZ44_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ44_9STRA) HSP 1 Score: 107 bits (268), Expect = 2.350e-25 Identity = 56/97 (57.73%), Postives = 70/97 (72.16%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYDQAKGKSDEEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMDDEAKTEEATAKLQAAIEQGN 298 MGRYTTVQAYSD+NPK+ VSY+QA ++ A G+L +K D VMGS AGAGSGEFH YRA RR+E+HR+AA++ AK +E L+A IE N Sbjct: 1 MGRYTTVQAYSDSNPKVAKVSYEQATQGGEKHTTASGRLQTDKVDNVMGSTAGAGSGEFHMYRAARRREIHRMAAIEAAAKADEERRALEATIEGKN 97
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: A0A7S2V2K9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2K9_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.800e-21 Identity = 55/113 (48.67%), Postives = 75/113 (66.37%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYDQAKGKSD----EEGKA-----GGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMDDEAKTEEATAKLQAAIEQGNKECEERT 319 MGRYTTVQ Y+DNNPK+V VSY QA G+ ++G A GK+ V K D VMGS AGAGSG+FH+YRA R +E+ R+ A++ A+ ++ + Q ++Q + CEERT Sbjct: 1 MGRYTTVQTYTDNNPKVVQVSYAQAVGQDKATRAQDGGAMVEQKSGKVKVPKVDNVMGSTAGAGSGDFHSYRATRMREIKRMEAIEAGARQDDLVEEFQHRLQQKRQSCEERT 113
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: A0A6S9D7T2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9D7T2_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 5.970e-17 Identity = 47/83 (56.63%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYDQAKGKSDEEGKAGGKLVV--EKTDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMDDEAK 250 MGRYTTVQAY+DNNP + VSYDQA GK++ G V EK D GS AGAGSGEFH YR R +EM R+A ++ E K Sbjct: 1 MGRYTTVQAYADNNPNMRSVSYDQATGKTEPSSSTAGAGAVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLEYEEK 83
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: A0A0P1A6J8_PLAHL (Uncharacterized conserved protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6J8_PLAHL) HSP 1 Score: 82.0 bits (201), Expect = 9.410e-16 Identity = 47/89 (52.81%), Postives = 59/89 (66.29%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYD---QAKGKSDEEGKA-GGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMDDEAKTEEA 262 MG YTT+Q +SD + + V+YD AK SD GGKLVV + D V GS AGAGSGEFHTYRA RR+EM R+A+M+ + K +A Sbjct: 1 MGCYTTLQTFSDQDAQGAAVAYDADSNAKDSSDAASNVKGGKLVVNRVDNVSGSSAGAGSGEFHTYRAARRREMDRIASMEQQYKDNKA 89
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: A0A7S2HD40_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HD40_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 2.360e-15 Identity = 46/93 (49.46%), Postives = 55/93 (59.14%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYDQAKGKSDE----------EGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMDDEAKTE 256 MGRYTTVQAY+DNNP + VSYDQA G+S G G + EK D GS AGAGSGEFH YR R +EM R+A ++ K + Sbjct: 1 MGRYTTVQAYADNNPSMRSVSYDQATGRSSSGVAAAASSSATGPGSGSVKPEKVDNPYGSTAGAGSGEFHVYRHARSREMARMAQLEHAEKNQ 93
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: A0A225X3R8_9STRA (RNA-binding protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X3R8_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 8.480e-15 Identity = 45/96 (46.88%), Postives = 58/96 (60.42%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYDQAKGKSDEEGKAG-----GKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMDDEAKTEEATAKLQA 280 MGRYT+VQ +SD + + V+YD A +G GK V + D V GS AGAGSG+FHTYRA RR+EM RVAAM+ K +A + +A Sbjct: 1 MGRYTSVQTFSDQDAQGAAVTYDAASKDESSAAASGADAKDGKFHVNRVDNVSGSSAGAGSGDFHTYRASRRREMERVAAMEQRYKDNKAQQEFEA 96
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: A0A484DQI6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DQI6_BRELC) HSP 1 Score: 79.0 bits (193), Expect = 1.300e-14 Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYDQAKGKSDEEGKAG----GKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMD 238 MGRYTTVQ +SD + ++ V+YD + + G GKL V + D V GS AGAGSGEFH+YRA RR+EM RVA M+ Sbjct: 1 MGRYTTVQTFSDQDAQVATVAYDATVKEKEPSGTTSEIKDGKLHVNRVDNVSGSSAGAGSGEFHSYRAARRREMERVAVME 81
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: A0A1V9YR89_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YR89_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.020e-13 Identity = 50/110 (45.45%), Postives = 61/110 (55.45%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYDQAKGKSDEEGKAGGKLVVEK-----TDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMDDEAKTEEATAKLQAAIEQGNKECEERTR 322 MGRYTT Q Y+D K+ V YD K KS+ A EK + V GS AGAGSGEFH YRA RR+EM RV AM+ E K + Q ++ +E EE+TR Sbjct: 1 MGRYTTEQTYTDKEAKVGTVPYDVVKDKSETPAVAPADAPKEKFKFNRVENVSGSTAGAGSGEFHMYRAARRREMERVGAMEAEHKKKMEDEAFQEKRKRIQEELEEKTR 110
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Match: G4YMD8_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YMD8_PHYSP) HSP 1 Score: 76.6 bits (187), Expect = 1.470e-13 Identity = 44/91 (48.35%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 8 MGRYTTVQAYSDNNPKLVHVSYDQAK------GKSDEEGKAGGKLVVEKTDQVMGSCAGAGSGEFHTYRAHRRKEMHRVAAMDDEAKTEEA 262 MGRYTTVQ +SD + K V+Y+ A E K KL + + D V GS AGAGSG+FHTYRA RR+EM RV AM+ K +A Sbjct: 1 MGRYTTVQTFSDQDAKGAAVAYNAASEPAAAPADGANESKDSSKLHINRVDNVSGSSAGAGSGDFHTYRAARRREMERVEAMEQRYKENKA 91 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig157.3984.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig157.3984.1 >prot_L-elsbetiae_contig157.3984.1 ID=prot_L-elsbetiae_contig157.3984.1|Name=mRNA_L-elsbetiae_contig157.3984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=233bp MGRYTTVQAYSDNNPKLVHVSYDQAKGKSDEEGKAGGKLVVEKTDQVMGSback to top mRNA from alignment at L-elsbetiae_contig157:50209..53485- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig157.3984.1 ID=mRNA_L-elsbetiae_contig157.3984.1|Name=mRNA_L-elsbetiae_contig157.3984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3277bp|location=Sequence derived from alignment at L-elsbetiae_contig157:50209..53485- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig157:50209..53485- >mRNA_L-elsbetiae_contig157.3984.1 ID=mRNA_L-elsbetiae_contig157.3984.1|Name=mRNA_L-elsbetiae_contig157.3984.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1398bp|location=Sequence derived from alignment at L-elsbetiae_contig157:50209..53485- (Laminarionema elsbetiae ELsaHSoW15)back to top |