mRNA_L-elsbetiae_contig1569.3974.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1569.3974.1
Unique NamemRNA_L-elsbetiae_contig1569.3974.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 1.010e-27
Identity = 73/161 (45.34%), Postives = 97/161 (60.25%), Query Frame = 2 
Query:   35 LRTPLVFAASNAGTPGAVEMVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDAD-VQEEIGRVHQLLTNAPADRNWRRRGYLVLCRAHPDRVQQRQDIISTHTGAVQR-----------------------AGGDWAGMAAWALELEEEGLFRAIVEFL 445
            L TPL+ A   AG  GA E+V+ LL++GADETI + QG  AVD+IG   ED ++ D + E++ RV +LL NAPADR WRRRGYL++CRA PDRV +R+    TH   V R                        GG+WA + +  + L+EEG+FR IVE+L
Sbjct:  243 LLTPLMKAGRQAGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIG---EDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.370e-20
Identity = 67/148 (45.27%), Postives = 82/148 (55.41%), Query Frame = 2 
Query:    2 HGADIDEPNVQLRTPLVFAASNAGTPGAVEMVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDADVQEEIGRVHQLLTNAPADRNWRRRGYLVLCRAHPDRVQQRQDIISTHTGAVQRAGGDWAGMAAWALELEEEGLFRAIVEFL 445
            HGAD++   V   + L + A+ AG  G VE+VDLLL+ GADET V   G  A D IG    + D   + EE   V +LL NAPADR WRRR  LVLCRA PD++Q   D I              A + A  L L EEG+FR IV F+
Sbjct:  251 HGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDR--IPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSDRI--------------ARLEARVLGLVEEGIFRTIVRFI 382
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 102 bits (254), Expect = 2.590e-19
Identity = 61/142 (42.96%), Postives = 79/142 (55.63%), Query Frame = 2 
Query:    2 HGADIDEPNVQLRTPLVFAASNAGTPGAVEMVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDADVQEEIGRVHQLLTNAPADRNWRRRGYLVLCRAH--PDRVQQRQDIISTHTGAV----------QRAGGDWAGMAA 391
            HGA + + N   +TPL   A+ AG+PG  EMVDLLL+ GADET V + G  A D++   TE+ D   + E++ RV +LL  APADR WRRRG+L+L RAH    RVQ            V           RA  DWAG+ +
Sbjct:  611 HGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDS--LAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRTRSSEEPSRAEIDWAGVVS 750
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 97.1 bits (240), Expect = 4.610e-18
Identity = 63/156 (40.38%), Postives = 80/156 (51.28%), Query Frame = 2 
Query:   56 AASNAGTPGAVEMVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDADVQEEIGRVHQLLTNAPADRNWRRRGYLVLCRAHPDRVQQRQDIISTHTGAVQR--------------------------AGGDWAGMAAWALELEEEGLFRAIVEFL 445
            AAS AG  G+ E+VDLLL+ GADET  D  G+   D +G   E   D  +  E+  VH+LL NAPADR WRRRG LVLCRA   R + RQ+      G + R                           G +W   +   +ELEEEG+FR++V FL
Sbjct:  268 AASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCME-LGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQEDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.770e-17
Identity = 60/122 (49.18%), Postives = 69/122 (56.56%), Query Frame = 2 
Query:   80 GAVEMVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDADVQEEIGRVHQLLTNAPADRNWRRRGYLVLCRAHPDRVQQRQDIISTHTGAVQRAGGDWAGMAAWALELEEEGLFRAIVEFL 445
            G+ ++VDLLL+ GADETIV  QG  A D IG       D +  E   R   LL  APADR WRRRG LVLCRAHPDR+Q                GGD AG+ A    LEE G+FR IV +L
Sbjct:  288 GSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDPEDDE---RARSLLARAPADRAWRRRGLLVLCRAHPDRLQ---------------LGGDLAGLVAGVGGLEEVGVFRTIVLYL 391
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE)

HSP 1 Score: 87.0 bits (214), Expect = 3.620e-16
Identity = 48/86 (55.81%), Postives = 57/86 (66.28%), Query Frame = 2 
Query:   56 AASNAGTPGAVEMVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDADVQEEIGRVHQLLTNAPADRNWRRRGYLVLCRAHPDRV 313
            A + AG  G  E+VD LL+SGADETI+D +GRAAVD+I W       +  Q++  RV  LL NA ADR W RR YLVLCR HPDR 
Sbjct:   91 ATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDD--RVRDLLVNAQADRAWHRRRYLVLCRTHPDRA 174
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 6.970e-16
Identity = 61/126 (48.41%), Postives = 71/126 (56.35%), Query Frame = 2 
Query:   80 GAVEMVDLLLKSGADETIVDDQGRAAVDVIGWL----TEDYDDADVQEEIGRVHQLLTNAPADRNWRRRGYLVLCRAHPDRVQQRQDIISTHTGAVQRAGGDWAGMAAWALELEEEGLFRAIVEFL 445
            G+V++V LLL+ GADETIV  QG+ A D IG      TE  DD        R   LLT APADR WRRRG LVLC A+PDR+Q                GGD AG+    L LEE G+FR IV +L
Sbjct:  284 GSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDDE-------RARSLLTRAPADRAWRRRGLLVLCHAYPDRLQ---------------LGGDLAGLVDRVLGLEEVGVFRTIVLYL 387
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 9.580e-16
Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 2 
Query:    2 HGADIDEPNVQLRTPLVFAASNAGTPGAVEMVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDADVQEEIGRVHQLLTNAPADRNWRRRGYLVLCRAHPDRVQQRQDIISTHTGAVQRA 364
            HGA+I+  +++  TPL+ AA  AG  G   +VD+LL+ GADET ++  GR A +V+G   E       ++++ RV  LL NAPADR WRRRG LVLCRA   + ++ +   S+  G   RA
Sbjct:  243 HGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRA 363
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 1.450e-15
Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 2 
Query:    2 HGADIDEPNVQLRTPLVFAASNAGTPGAVEMVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDADVQEEIGRVHQLLTNAPADRNWRRRGYLVLCRA 298
            HG++I+  +++  TPL+ AA  AG  G   +VD+LL+ GADET ++  GR A +V+G   E       ++++ RV  LL NAP DR WRRRG+LVLCRA
Sbjct:  194 HGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRA 292
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BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 1.090e-14
Identity = 62/154 (40.26%), Postives = 83/154 (53.90%), Query Frame = 2 
Query:   65 NAGTPGAVEMVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDADVQEEIGRVHQLLTNAPADRNWRRRGYLVLCRAHPDRVQQRQD-----------IISTHTGAVQR---AGG-------------DWAGMAAWALELEEEGLFRAIVEFL 445
            +AG  GAVE+VDLLL+  ADET  D  G    +++G +T + D   V   + RV +LL  AP DR WRRRG LVLCRAHP+R+  RQ+           +  + T  V+R   AGG             +W+ M    L L+E G+FR IV +L
Sbjct:  249 SAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVN--VQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGLDE-GIFRTIVGYL 399
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1569.3974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE1.010e-2745.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI1.370e-2045.27Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6H5JHY9_9PHAE2.590e-1942.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYD0_ECTSI4.610e-1840.38Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G1U1_ECTSI2.770e-1749.18Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JMJ6_9PHAE3.620e-1655.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G137_ECTSI6.970e-1648.41Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KNU3_9PHAE9.580e-1642.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI1.450e-1546.46Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G981_ECTSI1.090e-1440.26Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1569contigL-elsbetiae_contig1569:5916..7911 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score92.0
Seed ortholog evalue2e-16
Seed eggNOG ortholog2880.D7G1U1
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size1494
Cds size357
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1569.3974.1prot_L-elsbetiae_contig1569.3974.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1569 6007..6363 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815643.3846185-UTR-L-elsbetiae_contig1569:5915..60061622815643.3846185-UTR-L-elsbetiae_contig1569:5915..6006Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1569 5916..6006 +
1691683010.0209298-UTR-L-elsbetiae_contig1569:5915..60061691683010.0209298-UTR-L-elsbetiae_contig1569:5915..6006Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1569 5916..6006 +
1622815643.4112625-UTR-L-elsbetiae_contig1569:6363..63681622815643.4112625-UTR-L-elsbetiae_contig1569:6363..6368Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1569 6364..6368 +
1691683010.0438325-UTR-L-elsbetiae_contig1569:6363..63681691683010.0438325-UTR-L-elsbetiae_contig1569:6363..6368Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1569 6364..6368 +
1622815643.4212081-UTR-L-elsbetiae_contig1569:6870..79111622815643.4212081-UTR-L-elsbetiae_contig1569:6870..7911Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1569 6871..7911 +
1691683010.0545566-UTR-L-elsbetiae_contig1569:6870..79111691683010.0545566-UTR-L-elsbetiae_contig1569:6870..7911Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1569 6871..7911 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815643.3957536-CDS-L-elsbetiae_contig1569:6006..63631622815643.3957536-CDS-L-elsbetiae_contig1569:6006..6363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 6007..6363 +
1691683010.0339015-CDS-L-elsbetiae_contig1569:6006..63631691683010.0339015-CDS-L-elsbetiae_contig1569:6006..6363Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1569 6007..6363 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1569.3974.1

>prot_L-elsbetiae_contig1569.3974.1 ID=prot_L-elsbetiae_contig1569.3974.1|Name=mRNA_L-elsbetiae_contig1569.3974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
MVDLLLKSGADETIVDDQGRAAVDVIGWLTEDYDDADVQEEIGRVHQLLT
NAPADRNWRRRGYLVLCRAHPDRVQQRQDIISTHTGAVQRAGGDWAGMAA
WALELEEEGLFRAIVEFL*
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mRNA from alignment at L-elsbetiae_contig1569:5916..7911+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1569.3974.1 ID=mRNA_L-elsbetiae_contig1569.3974.1|Name=mRNA_L-elsbetiae_contig1569.3974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1996bp|location=Sequence derived from alignment at L-elsbetiae_contig1569:5916..7911+ (Laminarionema elsbetiae ELsaHSoW15)
GCATGGTGCCGACATCGATGAGCCCAACGTGCAACTTCGAACGCCGTTGG
TGTTTGCAGCCAGCAACGCCGGAACACCGGGAGCAGTGGAGATGGTTGAT
CTTCTGCTGAAGTCCGGTGCAGACGAGACGATCGTCGACGACCAGGGCAG
AGCAGCTGTGGATGTTATCGGGTGGTTGACCGAAGACTACGACGACGCCG
ACGTCCAAGAAGAAATCGGCCGCGTACACCAGCTTTTGACAAACGCCCCG
GCCGACAGGAATTGGCGTCGCAGGGGCTATCTAGTGCTGTGTCGTGCTCA
TCCTGACAGGGTGCAGCAGAGGCAGGATATCATAAGCACGCATACCGGCG
CGGTACAAAGAGCTGGCGGTGACTGGGCTGGCATGGCGGCCTGGGCCCTG
GAGCTGGAGGAAGAAGGCTTGTTCCGGGCGATCGTGGAGTTCCTGTGAAG
CTGGTGAGACAAACATGTCGTATCAGTGGTCATCAGACCTTCACGCGCGA
CCGCATATGTGGGCCTCGATCGCTTTTGTTCGATACATGCTGAGTTGCGA
GTTCTCTAGCATCGCGAGCTTTGTATTGTGCGCCCTGCTCCAAAACGGCC
GTTTGTTCGCATTGTTTTTTTCATTGCTTCGGTTGTCCGTCTCTGTCTCC
CAATTGTGACCTTTCCCGCCCTAACGGGAGGACAGATTCGCCACATTTTT
TTCAATAGGTAGTTGTTTTTCACGGACCCGGTATCTTGGTCTCCAAAAGG
ACATGTCTCATAGGTCGCGTGGTGATCTGGCACTGTTTCGATTCTACTGC
GTTGCTGAGACCGTTGGAAGACGGGAGTCTTGTGGTAGTCGTCTGCCCTC
AGCGACAACAACAGTAGTACACAATCGAGCCACGCGTGCGACACAACGGA
CTCGCTGTCCTTGTTTGTCACACAATGCTTTGCGGGCCGGTGTGTGCGTA
TTCAGCCATTTCAGGGTACTTCACCAGCTGTTCACGGGGGGCGGCGCAAG
TGATGCGCACCATGCTACGAGCAAGAGTTGCCCGAGGGATCACCTCGTCG
GGAGATTTGCGAGCTTGACGGAGTTGTTTCGTTCAAGCCATCCTGCTGCT
TCAGGCGCCGTCCATTGGAAACCGCGAATCCCTCTTAGTGTACACCCGCC
AGCCATAGCAATAGTGTGTGTTTGTGCTTGTTATTTCGCTGGCTGCGCAT
GTACGCTGAGAGCAGCCCTACCTGATGAATGCTAATGTTCCACGTTCCAC
ACCATTGTAGGAAGGGGAGTATCAGCATACAACGTTGTTTTTGTGACGTG
ATATTGTACGCGAGTTGGAGCGTGGTGCCCCCCACCCCCCGTCAATTGTG
TTGTGTGGAGATGAATCTTCTTGGCGCCTACACGAAAGTATTTAATTTTA
AGAGAACGGAACATCAGCTGTTCTACCGGTATCAGGGTTATTTTCTTTTA
AACATAAACAATGAATCAAAGATGGAACTTAACCCACACTAGAGCAAGAA
CTCGATATGGGATATTTTATTTTCCTTTATCAACACCACCAGGTGACAGG
AGCCCTGTTTGAAAATTTGGTGAGCTAACAGTGGCCGCTGTTCGAAAATT
TTGTGGTTATTTCCTGCAACATGGCAGATCGCTCGCGCTGGATATAGACT
ACCCCAGTGCTGCGTTTTTGTTTTGCTGTGTATCCGAACAAAAACATCAC
CGGCTCCCGGAGGAGCATCCCAAAGTAGCACGAAGTCGCCAACACCTCGG
ATCAATAGTTTTGAACGTACCGGGGATTTTGTGAGGTGGTCTACCTTGAT
TGCATCGACCAACCGTAGAAAGCGCGTGACATTGTTAATACTCGTAGGGT
TGACTGTCCAGTTCTTGCCTTCCGCTTTGAAGTTTTGTCACGAGCTGATG
TGGTGACTCTTTTTCCTGGTGTTTTTACTCCTACTTCCTTTGTCCCGTAA
GTAAAGTCCGTTATGATTACGCGGATCATTACCTAGGTTTGATCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1569:5916..7911+

>mRNA_L-elsbetiae_contig1569.3974.1 ID=mRNA_L-elsbetiae_contig1569.3974.1|Name=mRNA_L-elsbetiae_contig1569.3974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=714bp|location=Sequence derived from alignment at L-elsbetiae_contig1569:5916..7911+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGTTGATCTTCTGCTGAAGTCCGGTGCAGACGAGACGATCGTCGACGA
CCAGGGCAGAGCAGCTGTGGATGTTATCGGGTGGTTGACCGAAGACTACG
ACGACGCCGACGTCCAAGAAGAAATCGGCCGCGTACACCAGCTTTTGACA
AACGCCCCGGCCGACAGGAATTGGCGTCGCAGGGGCTATCTAGTGCTGTG
TCGTGCTCATCCTGACAGGGTGCAGCAGAGGCAGGATATCATAAGCACGC
ATACCGGCGCGGTACAAAGAGCTGGCGGTGACTGGGCTGGCATGGCGGCC
TGGGCCCTGGAGCTGGAGGAAGAAGGCTTGTTCCGGGCGATCGTGGAGTT
CCTGTGAATGGTTGATCTTCTGCTGAAGTCCGGTGCAGACGAGACGATCG
TCGACGACCAGGGCAGAGCAGCTGTGGATGTTATCGGGTGGTTGACCGAA
GACTACGACGACGCCGACGTCCAAGAAGAAATCGGCCGCGTACACCAGCT
TTTGACAAACGCCCCGGCCGACAGGAATTGGCGTCGCAGGGGCTATCTAG
TGCTGTGTCGTGCTCATCCTGACAGGGTGCAGCAGAGGCAGGATATCATA
AGCACGCATACCGGCGCGGTACAAAGAGCTGGCGGTGACTGGGCTGGCAT
GGCGGCCTGGGCCCTGGAGCTGGAGGAAGAAGGCTTGTTCCGGGCGATCG
TGGAGTTCCTGTGA
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