prot_L-elsbetiae_contig15670.3967.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig15670.3967.1
Unique Nameprot_L-elsbetiae_contig15670.3967.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length133
Homology
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BLAST of mRNA_L-elsbetiae_contig15670.3967.1 vs. uniprot
Match: A0A6H5JJQ2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJQ2_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 8.250e-29
Identity = 55/84 (65.48%), Postives = 69/84 (82.14%), Query Frame = 0 
Query:   50 VGGDGSFRPVPVTNGTARLFFRGAVPIAVFWAAIRAVPEDVGFRSGFLRCCAVYFLALASDATQSVLASIKRDFPESCEAWELR 133
            +GGD   RP PV N TAR F++GAVP+AVF AA++AVP DVGFR+GFLRCCA  F  L+S+A QS+L S++RDFP+SCEAWE+R
Sbjct:  137 LGGDDGARPAPVMNDTARRFYKGAVPMAVFRAAVKAVPADVGFRAGFLRCCAEDFPVLSSEAAQSILTSMERDFPDSCEAWEVR 220
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BLAST of mRNA_L-elsbetiae_contig15670.3967.1 vs. uniprot
Match: A0A835YXJ8_9STRA (U3 small nucleolar RNA-associated protein 6-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ8_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.190e-9
Identity = 31/77 (40.26%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:   57 RPVPVTNGTARLFFRGAVPIAVFWAAIRAVPEDVGFRSGFLRCCAVYFLALASDATQSVLASIKRDFPESCEAWELR 133
            R V +++ T + F++G VP+A+F AA +A+P+D+  R   L+ C   F  L+     ++L S+K DFP S EAW LR
Sbjct:  229 RQVVMSDAT-KQFYKGGVPLAIFRAARKALPDDIALRGHCLQVCCTEFPELSKHVQSAILDSLKEDFPASAEAWALR 304
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15670.3967.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJQ2_9PHAE8.250e-2965.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YXJ8_9STRA1.190e-940.26U3 small nucleolar RNA-associated protein 6-domain... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15670contigL-elsbetiae_contig15670:2198..2596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15670.3967.1mRNA_L-elsbetiae_contig15670.3967.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig15670 1908..2596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig15670.3967.1 ID=prot_L-elsbetiae_contig15670.3967.1|Name=mRNA_L-elsbetiae_contig15670.3967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=133bp
MPAGKAWIYRSSRQRRARAGSRASRLFKKQRRRRQGRGRVGPGGDSGATV
GGDGSFRPVPVTNGTARLFFRGAVPIAVFWAAIRAVPEDVGFRSGFLRCC
AVYFLALASDATQSVLASIKRDFPESCEAWELR
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