mRNA_L-elsbetiae_contig1566.3960.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1566.3960.1
Unique NamemRNA_L-elsbetiae_contig1566.3960.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: D7G118_ECTSI (Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G118_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 1.760e-126
Identity = 195/196 (99.49%), Postives = 195/196 (99.49%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGGXXXXXXXXXKCC 588
            DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTV LGGXXXXXXXXXKCC
Sbjct:    7 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVNLGGXXXXXXXXXKCC 202
[Close]
BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A835Z965_9STRA (Rab1A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z965_9STRA)

HSP 1 Score: 323 bits (827), Expect = 2.030e-110
Identity = 169/200 (84.50%), Postives = 175/200 (87.50%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNS----TVQLGGXXXXXXXXXKCC 588
            DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF HVNDWLSEVNRYASEGTSKLLIGNKSDR DK V +  AK +A+SLGIPFLETSAK+ASNVEEAFLTMASELIRTREARAA Q ++S    TVQL           KCC
Sbjct:    7 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFGHVNDWLSEVNRYASEGTSKLLIGNKSDRADKAVTTEQAKSFAQSLGIPFLETSAKSASNVEEAFLTMASELIRTREARAAQQAESSGTAATVQLRPGASGGGSSGKCC 206
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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S3VAP6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VAP6_9STRA)

HSP 1 Score: 305 bits (782), Expect = 1.670e-103
Identity = 158/199 (79.40%), Postives = 169/199 (84.92%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAAT--QVDNSTVQLGGXXXXXXXXXKCC 588
            D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT Q+SFDHVNDWL EVNRYASEGT KLL+GNKSDR  DKVV +  AKE+A+ +GIPFLETSAK+A+NVEEAFLTMASELI+ R AR  T    D   VQLGG          CC
Sbjct:   12 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQDSFDHVNDWLKEVNRYASEGTCKLLVGNKSDRTTDKVVTAEQAKEFADDIGIPFLETSAKSAANVEEAFLTMASELIKQRIARGGTAEDADGDNVQLGGGKRAKEMMSNCC 210
[Close]
BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: W7TI50_9STRA (Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TI50_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.350e-100
Identity = 154/205 (75.12%), Postives = 166/205 (80.98%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREAR---------AATQVDNSTVQLGGXXXXXXXXXKCC 588
            D LFKLVLIGD+GVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKT KLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT +ESF+H+ DWL+EVNRYASEGT KLL+GNKSDR DKVV +  AK++A+ LGIPFLETSAKNASNVEEAFLTMA ELIR REA+         AA+     TV L            CC
Sbjct:    7 DFLFKLVLIGDTGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTFKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNEESFEHIQDWLNEVNRYASEGTCKLLVGNKSDRPDKVVSTERAKKFADELGIPFLETSAKNASNVEEAFLTMAQELIRLREAKGAAAPGPGGAASGKSGDTVSLSSKNDKEGVMKNCC 211
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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: F0YFR6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFR6_AURAN)

HSP 1 Score: 297 bits (761), Expect = 2.130e-100
Identity = 148/169 (87.57%), Postives = 158/169 (93.49%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREA 507
            DHLFKLVLIGD+GVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT  ESFDHV+DWL+EVNRYA+EGT KLL+GNK D EDKVV + AAKEYA+ LGIPFLETSAKNA+NVEEAFLTMA ELIR REA
Sbjct:    7 DHLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEGTCKLLVGNKCDMEDKVVTTEAAKEYADGLGIPFLETSAKNATNVEEAFLTMAGELIRLREA 175
[Close]
BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S1GR15_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GR15_CYCTE)

HSP 1 Score: 295 bits (755), Expect = 2.230e-99
Identity = 152/185 (82.16%), Postives = 161/185 (87.03%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGG 552
            D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT  ESFDHVNDWL EVNRYA+EGT KLL+GNKSDR  DKVV    AKE+A+ LGI FLETSAK+A NVEEAFLTMA ELIR R+AR  T    S + L G
Sbjct:   16 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSSESFDHVNDWLKEVNRYAAEGTVKLLVGNKSDRVADKVVTEEKAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIRQRDARGITSDGKSGIDLSG 200
[Close]
BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S1XNK2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNK2_9STRA)

HSP 1 Score: 293 bits (750), Expect = 7.160e-99
Identity = 151/197 (76.65%), Postives = 168/197 (85.28%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDR-EDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGGXXXXXXXXXKCC 588
            DHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTV+IDKK VKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF+ +  WL+EVNRYA+EGT KLL+GNKSDR ED++V +A  +E A+SLGIPFLETSAKNA+NVEEAFLTMASELI +RE R     D++ +QLG          KCC
Sbjct:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVRIDKKVVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTNQESFNSITAWLNEVNRYATEGTCKLLVGNKSDRDEDRIVTTAQGEEMAKSLGIPFLETSAKNAANVEEAFLTMASELITSREERGGATGDDANLQLGSSGGGNG---KCC 194
[Close]
BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S2N4U8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N4U8_9STRA)

HSP 1 Score: 293 bits (749), Expect = 1.760e-98
Identity = 149/185 (80.54%), Postives = 160/185 (86.49%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDRE-DKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGG 552
            DHLFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT ++SFDHVNDW+ EVNRYASEGT KLL+GNKSDR  DK+V    AKE+A+ LGI FLETSAK+A NVEEAFLTMA ELI+ R  R +   D   V L G
Sbjct:   15 DHLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSKDSFDHVNDWMKEVNRYASEGTCKLLVGNKSDRTADKIVKEEEAKEFADELGIAFLETSAKSAKNVEEAFLTMAGELIKQRAERGSNGDDKQKVSLNG 199
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BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S2C3M2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C3M2_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.300e-97
Identity = 145/170 (85.29%), Postives = 156/170 (91.76%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREAR 510
            DHLFKLVLIGDSGVGKSCLLLRFAD+AFT+SYISTIGVDFRFRT+K++K TVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVT QESF+HV+DWL+EVNRYASEGT KLL+GNKSDR D  V S  AK YAE LGIPFLETSAKNA NVE AFLTMASELI+ R+AR
Sbjct:   13 DHLFKLVLIGDSGVGKSCLLLRFADNAFTESYISTIGVDFRFRTIKVEKNTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTSQESFNHVSDWLTEVNRYASEGTCKLLVGNKSDRADWAVSSEEAKVYAEKLGIPFLETSAKNAENVETAFLTMASELIKIRQAR 182
[Close]
BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Match: A0A7S2Y0T5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0T5_9STRA)

HSP 1 Score: 290 bits (741), Expect = 2.060e-97
Identity = 142/184 (77.17%), Postives = 164/184 (89.13%), Query Frame = 1 
Query:    1 DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNASNVEEAFLTMASELIRTREARAATQVDNSTVQLGG 552
            D+LFKLVLIGDSGVGKSCLLLRFADDAFT+SYISTIGVDFRFRTVK+D+KTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYD+T +E+FDHVNDWL+EV+RYA E T KLL+GNKSDR D+ V++  AKEYA+ LGIPF+ETSAK+A+NVE+AFLTMA +LI  R+A+   +  N  V LGG
Sbjct:    7 DYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKLDQKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDITHKEAFDHVNDWLAEVDRYAGESTCKLLVGNKSDRTDRAVETQTAKEYADELGIPFIETSAKSAANVEQAFLTMAKQLIELRQAKGVEE-SNQNVSLGG 189
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1566.3960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G118_ECTSI1.760e-12699.49Rab1A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A835Z965_9STRA2.030e-11084.50Rab1A, rab family GTPase n=1 Tax=Tribonema minus T... [more]
A0A7S3VAP6_9STRA1.670e-10379.40Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
W7TI50_9STRA1.350e-10075.12Rab1 family protein n=2 Tax=Monodopsidaceae TaxID=... [more]
F0YFR6_AURAN2.130e-10087.57Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1GR15_CYCTE2.230e-9982.16Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A7S1XNK2_9STRA7.160e-9976.65Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2N4U8_9STRA1.760e-9880.54Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2C3M2_9STRA1.300e-9785.29Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2Y0T5_9STRA2.060e-9777.17Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1566contigL-elsbetiae_contig1566:7080..13278 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score365.9
Seed ortholog evalue1.2e-98
Seed eggNOG ortholog2880.D7G118
KEGG koko:K07874
KEGG Pathwayko05134,map05134
Hectar predicted targeting categoryother localisation
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0084@1,KOG0084@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131,ko04147
Ec32 ortholog descriptionRab1A, RAB family GTPase
Ec32 orthologEc-19_002140.1
Exons6
Model size591
Cds size591
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1566.3960.1prot_L-elsbetiae_contig1566.3960.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1566 7080..13278 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815641.9880228-CDS-L-elsbetiae_contig1566:7079..71991622815641.9880228-CDS-L-elsbetiae_contig1566:7079..7199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 7080..7199 +
1691683009.152063-CDS-L-elsbetiae_contig1566:7079..71991691683009.152063-CDS-L-elsbetiae_contig1566:7079..7199Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 7080..7199 +
1622815642.0008423-CDS-L-elsbetiae_contig1566:9119..91671622815642.0008423-CDS-L-elsbetiae_contig1566:9119..9167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 9120..9167 +
1691683009.1637135-CDS-L-elsbetiae_contig1566:9119..91671691683009.1637135-CDS-L-elsbetiae_contig1566:9119..9167Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 9120..9167 +
1622815642.0164304-CDS-L-elsbetiae_contig1566:10143..102391622815642.0164304-CDS-L-elsbetiae_contig1566:10143..10239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 10144..10239 +
1691683009.175488-CDS-L-elsbetiae_contig1566:10143..102391691683009.175488-CDS-L-elsbetiae_contig1566:10143..10239Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 10144..10239 +
1622815642.0312395-CDS-L-elsbetiae_contig1566:11065..111441622815642.0312395-CDS-L-elsbetiae_contig1566:11065..11144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 11066..11144 +
1691683009.1842163-CDS-L-elsbetiae_contig1566:11065..111441691683009.1842163-CDS-L-elsbetiae_contig1566:11065..11144Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 11066..11144 +
1622815642.043036-CDS-L-elsbetiae_contig1566:11761..119181622815642.043036-CDS-L-elsbetiae_contig1566:11761..11918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 11762..11918 +
1691683009.1934676-CDS-L-elsbetiae_contig1566:11761..119181691683009.1934676-CDS-L-elsbetiae_contig1566:11761..11918Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 11762..11918 +
1622815642.0546558-CDS-L-elsbetiae_contig1566:13187..132781622815642.0546558-CDS-L-elsbetiae_contig1566:13187..13278Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 13188..13278 +
1691683009.2026718-CDS-L-elsbetiae_contig1566:13187..132781691683009.2026718-CDS-L-elsbetiae_contig1566:13187..13278Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1566 13188..13278 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1566.3960.1

>prot_L-elsbetiae_contig1566.3960.1 ID=prot_L-elsbetiae_contig1566.3960.1|Name=mRNA_L-elsbetiae_contig1566.3960.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp
DHLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKK
TVKLQIWDTAGQERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSE
VNRYASEGTSKLLIGNKSDREDKVVDSAAAKEYAESLGIPFLETSAKNAS
NVEEAFLTMASELIRTREARAATQVDNSTVQLGGGGSSASSSSKCC*
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mRNA from alignment at L-elsbetiae_contig1566:7080..13278+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1566.3960.1 ID=mRNA_L-elsbetiae_contig1566.3960.1|Name=mRNA_L-elsbetiae_contig1566.3960.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6199bp|location=Sequence derived from alignment at L-elsbetiae_contig1566:7080..13278+ (Laminarionema elsbetiae ELsaHSoW15)
GATCACCTTTTCAAGCTGGTGCTGATCGGCGATTCGGGCGTGGGCAAATC
GTGCCTGCTGCTGCGTTTCGCGGACGACGCCTTCACGGACAGCTACATCA
GCACCATCGGGGTAGACTTTGTGAGTGCGGCCTGGTCTTTGGTCCGGCTG
ATCCTCCTTGTTTTGAAAATAAAACAGTTGATCAAATATGGAACCTAACC
CACAGAGACAGCCGACTCCCATGAGCTTCTAACGGTATTCCATATAGTGA
CGTAATCTTGGTCCAGCCCAGTAGAAAAACACCTAAATGACGAAATAGTC
CATCACCTCCCCTGCATAATTTGTTTTTGTTTGGCGTGGGGGAGGGACCT
ATAGGCTTCCTGCAGCAGAGCCCCCAATTCCGAAAAAGTTGCTGTGGGGG
ATTTTGTAGGCCTTGACTCCGTTGGCCACTTTTTTCCCTGTTTTACCTAC
ACCTTCTTTTTCTCTACACTAAACTCAGTATAGTAACAAGTTTTGTTCCT
CCGCAATTCCACAAATGGCCAACGGAGTCAATGCCTAGGATTTTGCCCTC
TACAAGTATTTCCTAGATAAATACCCCCGCCGCTGCCCCCCACAGCCCTT
TTTGAGAATCGGGAGCTGGCTCTATTGCAGGAAGTCTATGCGGATGGACG
CAGGAGGCGGAATAGTCGTGGGCCTGTGTGTCGCATCAGGATAGTAGTAT
ACCACGTATGGCCCGTGTGATAAGTTTCGTAGAGCCACAAGGCGACGGGA
AAGAAGAGAAGAGTAGAGAGACTGCGAAACGTGAAAGAGAGGATGGAAAG
AGGCATTTCTCTGAATCTGCCCCTGTTTTTGGCTGCCTCGGCCCGTTTCC
TCTGCTGGTACACGAATGAAACAGCCCCCGGAGGCGTGTTTGGGTGCTGG
GATGGACGGTGTAGCGTTTTGCCACCATCACGCTGCCTCCGTTTGTGGTT
GAAAGCGAGCTCGTCTTGCCTGGTGCGATTTCTCCGCTCGTTCCAGATTG
TTGTGGTTGTATAACCTGTTGAACGTGTAAGCAAACCGAAATGCTCACAT
AGTCACGCAGGTAGTATACTACTCTCCCTGAGCTCCTTGACTCCTCTGGC
ACTACAATAGGCTCCACACAGCGCGCTAGTCGAGCAGCCCGCGAGACTGT
TACAAAAAGGTCGGGTCCCCACAGCATAACGTGACTTCTCTGCGCGGAAA
AGAGACGTACTTTTTTAGGAGAAGTTGTGCCCTCTTGCTGAAAATGCACC
GCGGCCGTGTGCACTACATAGAAAGGTTCCTCGGGCCTGAAAACATCACC
GCTAGTTCGCTCGATGTGTTTTTCGCCCGTGCTGGGTGGTTCCAGGCTCT
CCCATGCCTTCAGAGTACCCTAAATTCAGTATGTGAAAATGCTCGCAAGC
AAAAAATGATATATTTTTCAGCATCGAATCGTACTTCTGTCCTTCTCGGG
GGGCGGACGGATAGGGCCCCGCCTCTGGCGCTCAGTTACTTTGGAATATC
CAACGTCAACAGCAACAGCAAGCAGATCGAACACCGGTTCTGGTGTAGAC
GGAAGTCAAAGAGATGTTTGGCGATTTACACATATATATAGGTGTAAAGG
TGGTGTGCGTTGCATGGGTAGAACTGCGTCATCTGATGTGTGCGGGATGA
GAGGGAGAGCTAAATCGATTTCGTAAATCCAACTCGTGGCAAAATGCCAC
AGCCCAGCAGAGCGGCAGCGGCGGTGGCGGCGGCAGTAAGAGCAGGCAGA
CGTAGACGACACATGGCGTTATAACCCCTGCTGCTGTTCAACCCCATCTG
GGCCGCCACCATTTCGGTTGTTCATGTTATCGTCCCGATGTGCCGACTGG
CCCAGGTCCGCAGAAAACCGGGCGTCTCAATGACCGCTATTTGTGATCGC
CAAACTCTCCCCTCTTGCAGTCCCAGAAGGGTAAACCTAACCCGTACCCT
CAACCTGCTGCGTGCCCCCCTTTGTACGTATGTACCGCCTTCTCTTCGAC
TCTTCCATTTGGTGGGATGAAATGTGCCTTGTCCAATCAGCGATTCCGCA
CAGTGAAGATCGACAAGAAGACCGTAAAGCTTCAGATTGTGAGTGATCCT
CTCGTGCCGCATGTTCTGATGGCTATTGTGTGTTCTGGAAACCGACGTCA
ATGAGCTCCAGATGCCGTTTTCTGTGTGGTAGAACTGCAGCAACTTTTGC
CACAGTGCAAGGCTGTAGCATGCAAGTGCTTGGTGTTTTGTGGTGCACTC
CCAAAGCGGTATGGGTGTGCTATTGTACCTGCCCCCCCCCCCCCCCCCCC
CCCCTCCCACACAAAACCACACAAACGCAAACGCGCCGGCACGCAAACAG
AGGGATTGCNNNNNNNNNNGAAGTGTGTGTTGTTTTTTGGTGTCCCCCCC
CCACCGGGTGGGGGTGGTTTTTTTCCCCCCCCCCCCCCCCCCCCCCCCAA
ACGAAGCAAAAAAATGCTGTGTGAGCATCACGGCGACGAGATATTGGGTT
CAAGCGTTTTCCGGGACAGCCAAGAATGACCATGGCAACGATGATGGCGC
CGATGGCAACGATGGTGCTTGTAAATGGGCAGTTATGCGAAGCAACCCGC
ACCGCCGGATGTGTGGTTGTATGTCTCATGGTGCTCGGGCGCCCCGAGGG
GGTCATATCTCTAGAAAGTCGCAGCAGGTCGGTACGGTATACCACGGTAC
CCCCTGGACCGAAGCGATATACCGAACCCCCGCGACAGAGAGGATGCCCA
TACCCACCAGGGCCTTTGCTATATAGAAAGATCTCGTCGAGAAAAAAATC
GAAGACATGCCGGCACCCTCTTTACTGTGGAAGTAATCACGGAGCCCCCC
TGAGAATCGGTTTGTGGCGGTATGTTGATCTGTGCTGGTTCTTGCACGAC
CAGCTCGGTCCTTGAATTGCCTTGGCTGCCCGATGGACTGGTGCTCTGTT
TTCGCCCTCCGAAGCTCGTATAATGCTGGGCGTGCGCTTCGTGCGTTTGG
CTCTTCTGCGTCTTCGTCTTCGCTTGTTTGACTCGCTGTTGGCATCCTGC
GATGTATTATTCAGTGGGATACCGCGGGACAGGAGCGTTTCCGGACGATC
ACGTCGGCCTACTACAGGGGCGCGGATGGAATCATCATGGTGTATGACGT
CACGGGGCAGGTGAAAACACGGGTTTTTTTGGGAGTCAAGACGAGTCGTA
TGGTAGCAGTCTTGGACGCCAGGCCTCTGTACGCGGCAAGAGGAAGTGCT
TGCTCCTGACCGCTCGGGGCTTCCAGCCGCTAACCCCCCGAGCCTCTTGA
TGTAAGAAGCCGTACCTTCAGGCCACATCAGAGGCGCGGTCGTAGACTCC
GCCGGTACAGCGGTGTTGTGCTCCTGCGGCCCGATATACCGACAGGCAAA
GAAAAAGATAAATAGAGACAGAAAAAACAGGAATAAAAGAGGTGCAAGCC
AGACACCCATAGGCACAGTTGACGGACACAAATCGACAGGGACGTAGGGG
CGGAGAAGCATGGAGGGAGGAACAGGAAGAGAAAGCGGCTGTAACTGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGATACGGGCAGAAAGGCAGAAAGGCG
TATCACGAAGCGACGCCCGAAGCTACCCCTGTTGGATTCAGCGGGGTGGT
CGTTTTTTCTGCCGTAGTGCCTACGTAGATTGCTGCTTGGGGGTACGTAT
ATCTGTCCCTTTTCTGCGTGCCCTCTGTATTGTAGCGCCATGCTCGTAGC
CATGGGAATAAATAACCCTCTGGAAAAGTCATGCTTGCTTTTTGAGTTAA
ACGGCGCATGTTGTTTCTTAACGCCGAGGTAATTTTTTCTTTTGCACACG
CGCGCGCTTCGTACCAGGAATCGTTCGACCATTCCGAACTGTCTTATGCG
TGCTTGAGTCAAACGGCAGCATGTTGTTTGCCAACGCACAGGCTCACATT
TTTTTCACACACGCGCGCGCGCTTTGTATCCACCAGGAATCGTTCGACCA
CGTCAACGATTGGCTGAGCGAAGTCAACCGCTACGCTAGCGAGGGCACAA
GCAAGCTGCTCATAGGTGAGGCCAGTGGGGACGTTTATATACGAAGCGCC
TCGTGTGGGATGTTTTGGAGCCGTGGTCGGCTGCAACAGCGAGCGCCGCG
TCAGTGGATTTTTCGTTTTCGCGTCGTCTCGAGTTCGTTTTTCTGCGACC
TCATGCCGATCGTTGTCTCATTTTTGTGCGCAATTTTTTCGGGTCTCTTC
GAAATGTTTAGACATTACGCCCCCCCCCCCAAAGGTCGGGGTCTCGCCAA
CGAGGCACTACTGTGTTATTATCATCTTATACAGCGGCGTTGAAAAAACT
AAACCTCTGACTTGTTCGTATTTGTACGTAATTTTGTTTGTTTTTCCTTC
GTGGCGTTTTCGTGTATGTACCCCCTGCTTTGTAACGCCTGGCTGGCACT
ATAGTACGTAGATATTGGGAAACGTATTTTGACCCATGTAGCACAGGGTG
AAAAACAACGGCAACAACGACAGCCAATGAGTCGTCAGCAGAGCAGCAGA
GGCAGAGAGAGGGTGGCCGGCCAGCCAGCCTCTCGAAAGAGTAAGCTAAC
CAGCAGCAGTTGTCGTGATGCCACAAGTTTTCCGTCTCTTTTTTTTTTTT
TGTCTTCGTGATAAAATAAAAATAAATCGAAGGCAACAAGAGCGACCGCG
AGGACAAGGTGGTGGACAGTGCGGCCGCGAAGGAGTACGCGGAGTCGTTG
GGCATTCCCTTCTTGGAGACGAGCGCCAAAAACGCCTCGAACGTAGAAGA
GGCCTTCCTCACCATGGCCTCGGAGCTCATCCGCACCAGGTGTGGGTGCA
ACGCGCAGCATAAGACAACGTACTCAGTAGGAATTTTTATATTGCTCCTC
CGATTATTGACTTATTCGACGTCTGCCCCGCTGGCCCCCTCCCTCCACTA
CGACTAGCTAGACGGCCCAACCGGGGTCATATGTAGGGCCCAATCGTTTC
GCCGACGGCGTTCGGAGAAGAATTGATTTGTCACGCATCAGGGCATGGGT
GACCAAGCTCATCCATCGCCAGGGGTGGCATTTTGTTGTGTCGTACTTCT
ACGTATCTTAGCCTGCGGTCGTGGAAACGTCTCGTGGAAACGTCAAGTAA
CTACTTCGGGTGTCATTTCGTTGCGCACTTTGCGGTTTGCTGTATGTGGC
GTGCCGCGTGTGCACCATATACGACACAAGATACCAAACCCCTTGGGCCG
ATTTTCAAAGCTCGGATACTCCGCGACGAGTATGATTCCAGTACCAAACG
ACACGCTTTCAGACAGTTCTTGATGATATATTTCCAACGCTGCCCTTTTC
GGGACTGGCGCTCTTCTCGCTGTAGAGTACTTGAGCTTTGATAATCGGTC
CAGAGGGTGTGTTATCTTGTGAAGTATACAGTGCGCCACGAGATAAGACG
CAGATCAACATGTGTGACCCCGGTTGGGTCGTCTAGCTAGTCGTAGTGGA
GGAAGGGGGCCAGTGGGGCAGACGACAAATATGCCAATAATGGGAGGGGG
AAAAAAATGGTCCAACAGTGCAGAATGCCGTAGACCAACTTGGAACTGGG
CAGCGTCGATGTTCTTGTTAAACTTGTTGTTCCAAGGGCGTTAAGCATGG
CATGCTATATGCTGAGACCGAACCCCGGACGGGTTATCTATCTATTTGGG
GTCTCAGCTACGTCAGGCCCTCTCCACCTCCCCGCTTAGCAATGGACTAC
AATAGTGCACGCTACTGTAGAGAGACCTCTGTTTCGAAGTTGAAGTTTAG
TCTAGTCCACAGGAGTAGCGTGAGCGGTTTCCTTTTTCTGCCATATATAT
TGTACGAGCTTCGCCGCTCACCCTTTTTGTCTGCGGTAGTATCTCCATTC
AACCTCGGCCGGGGTGGCATGAAACTAGCCTGCCTTTGGTGTCCTGCTGC
TACGGCTGGCTGTGCTGCACGTCGTCATGTTTTCGCTTCCGGGTATGTAC
CCGTTAAAACTCGACTCATCTCCATGGTCACTCGCTGACAGACAATCTAC
CGCTGGCCTTGTTGTCTTGCTCAATGCCGTTTTTTCTGTTGGTTCATTCC
GCGTTCAGGGAAGCGCGAGCTGCAACGCAGGTGGACAATTCCACCGTCCA
GTTGGGTGGAGGCGGCAGCAGCGCATCCTCTAGCTCCAAATGCTGCTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1566:7080..13278+

>mRNA_L-elsbetiae_contig1566.3960.1 ID=mRNA_L-elsbetiae_contig1566.3960.1|Name=mRNA_L-elsbetiae_contig1566.3960.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1182bp|location=Sequence derived from alignment at L-elsbetiae_contig1566:7080..13278+ (Laminarionema elsbetiae ELsaHSoW15)
GATCACCTTTTCAAGCTGGTGCTGATCGGCGATTCGGGCGTGGGCAAATC
GTGCCTGCTGCTGCGTTTCGCGGACGACGCCTTCACGGACAGCTACATCA
GCACCATCGGGGTAGACTTTGATCACCTTTTCAAGCTGGTGCTGATCGGC
GATTCGGGCGTGGGCAAATCGTGCCTGCTGCTGCGTTTCGCGGACGACGC
CTTCACGGACAGCTACATCAGCACCATCGGGGTAGACTTTCGATTCCGCA
CAGTGAAGATCGACAAGAAGACCGTAAAGCTTCAGATTCGATTCCGCACA
GTGAAGATCGACAAGAAGACCGTAAAGCTTCAGATTTGGGATACCGCGGG
ACAGGAGCGTTTCCGGACGATCACGTCGGCCTACTACAGGGGCGCGGATG
GAATCATCATGGTGTATGACGTCACGGGGCAGTGGGATACCGCGGGACAG
GAGCGTTTCCGGACGATCACGTCGGCCTACTACAGGGGCGCGGATGGAAT
CATCATGGTGTATGACGTCACGGGGCAGGAATCGTTCGACCACGTCAACG
ATTGGCTGAGCGAAGTCAACCGCTACGCTAGCGAGGGCACAAGCAAGCTG
CTCATAGGAATCGTTCGACCACGTCAACGATTGGCTGAGCGAAGTCAACC
GCTACGCTAGCGAGGGCACAAGCAAGCTGCTCATAGGCAACAAGAGCGAC
CGCGAGGACAAGGTGGTGGACAGTGCGGCCGCGAAGGAGTACGCGGAGTC
GTTGGGCATTCCCTTCTTGGAGACGAGCGCCAAAAACGCCTCGAACGTAG
AAGAGGCCTTCCTCACCATGGCCTCGGAGCTCATCCGCACCAGGCAACAA
GAGCGACCGCGAGGACAAGGTGGTGGACAGTGCGGCCGCGAAGGAGTACG
CGGAGTCGTTGGGCATTCCCTTCTTGGAGACGAGCGCCAAAAACGCCTCG
AACGTAGAAGAGGCCTTCCTCACCATGGCCTCGGAGCTCATCCGCACCAG
GGAAGCGCGAGCTGCAACGCAGGTGGACAATTCCACCGTCCAGTTGGGTG
GAGGCGGCAGCAGCGCATCCTCTAGCTCCAAATGCTGCTGAGGAAGCGCG
AGCTGCAACGCAGGTGGACAATTCCACCGTCCAGTTGGGTGGAGGCGGCA
GCAGCGCATCCTCTAGCTCCAAATGCTGCTGA
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