mRNA_L-elsbetiae_contig15597.3918.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig15597.3918.1
Unique NamemRNA_L-elsbetiae_contig15597.3918.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: A0A6H5KXK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK5_9PHAE)

HSP 1 Score: 155 bits (393), Expect = 7.100e-39
Identity = 87/147 (59.18%), Postives = 109/147 (74.15%), Query Frame = 3 
Query:  507 AERQGAAKVVDSLLRSGADETILDHQGKTAADVVGEGIEEEDQLAEDVDRMRELLANAPADKAWRRRGYLVLCRAHPDRMQQIQDISSAQ-AGMARMTVSSCTIT-----ARVSTVDGRGGGDWARLVAKVLELQEEGIFRTIVGYL 929
            A RQGAA+VV+SLLR+GADETI + QG  A D++GE +EEED+L EDV+R+RELLANAPAD+AWRRRGYL++CRA PDR+ + +  S      +AR T S   +      A  STVD   GG+WA +V+KV+ LQEEGIFRTIV YL
Sbjct:  254 AGRQGAAEVVNSLLRAGADETIANVQGNKAVDMIGEDVEEEDRLTEDVERVRELLANAPADRAWRRRGYLIMCRAQPDRVPERRMTSGTHYTNVARRTRSRAKMARARGIAGESTVDESTGGNWAVVVSKVISLQEEGIFRTIVEYL 400
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BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: A0A6H5KNU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU3_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 4.510e-29
Identity = 101/286 (35.31%), Postives = 142/286 (49.65%), Query Frame = 3 
Query:    3 GKTEIVQLLLVKGADKDALDNIKRTPLHVATSYGHVAAALALLAAGADAS----LWSGEYIXXXXXXXXXXXXXXXXIRVAIEHGAEVDAVKGVAEHTALHLAAGLNEGEAINALLEAGANIEARNVLGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAERQGAAKVVDSLLRSGADETILDHQGKTAADVVGEGIEEE--DQLAEDVDRMRELLANAPADKAWRRRGYLVLCRAHPDRMQQIQDISSAQAGMARMTVSSCTITARVSTVDG 842
            G+   V  LL +GA K+ LD   RTPLH+A   GH++   ALLAA  D S    +W+  Y                 +R  ++HG +V+  +    +T+LH+AA  N   AI+ L+EAGA++E  +   CT                                         A RQG   +VD LLR GADET L+  G+TAA+VVG  IE        +D++R+R+LL NAPAD+AWRRRG LVLCRA   + ++++  SS+  G+    +S  +I  RVS   G
Sbjct:   98 GQEVRVATLLAEGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVHYRIWNRSY---SVLDFAAQKGDACVLRAILQHGVDVN--RRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACSNHCHEAALALFKHGANIEARDMRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDLERVRDLLENAPADRAWRRRGLLVLCRAFWIKSRRLRAASSSARGIGPRAMS-VSIGVRVSVAGG 377
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BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: D7G6X8_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6X8_ECTSI)

HSP 1 Score: 126 bits (317), Expect = 4.940e-28
Identity = 103/289 (35.64%), Postives = 141/289 (48.79%), Query Frame = 3 
Query:    3 GKTEIVQLLLVKGADKDALDNIKRTPLHVATSYGHVAAALALLAAGADAS----LWSGEYIXXXXXXXXXXXXXXXXIRVAIEHGAEVDAVKGVAEHTALHLAAGLNEGEAINALLEAGANIEARNVLGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAERQGAAKVVDSLLRSGADETILDHQGKTAADVVGEGIEEE--DQLAEDVDRMRELLANAPADKAWRRRGYLVLCRAHPDRMQQIQDISSAQAGMARMTVSSCTITARVSTVDGRGG 851
            G+   V  LL  GA K+ LD   RTPLH+A   GH++   ALLAA  D S    +W+  Y                 +R  ++HG +V+  +    +T+LH+AA  N   AI+ L+EAGA++E  +   CT                                         A RQG   +VD LLR GADET L+  G+TAA+VVG  IE        +DV+R+R+LL NAP D+AWRRRG+LVLCRA   + ++++  SS  A      V S +  AR+S   G GG
Sbjct:   49 GQEGRVATLLAGGAKKNGLDAQGRTPLHLAVENGHLSTVKALLAADPDTSVRYRIWNRSY---SVLDLAAQKGDACVLRAILQHGVDVN--RRTDGYTSLHVAALNNRVAAIDVLVEAGAHVEVEDDDDCTPFLDACINHCHEAALALYKHGSNIEARDIRGETPLIIAARQAGRQGVTAIVDMLLRCGADETALNPDGRTAAEVVGHHIEYAACPLNKQDVERVRDLLENAPVDRAWRRRGFLVLCRAFWIKARRLRAASS-NASSNGPRVRSLSTGARIS---GAGG 328
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BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: A0A6H5JHY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY9_9PHAE)

HSP 1 Score: 119 bits (299), Expect = 6.920e-25
Identity = 123/300 (41.00%), Postives = 152/300 (50.67%), Query Frame = 3 
Query:   75 TPLHVATSYGHVAAALALLAAGADASLWSGEYIXXXXXXXXXXXXXXXXIRVAIEHGAEVDAV--KGVAEHTALHLAAGLNEGEAINALLEAGANIEARNVLGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAERQGAAKVVDSLLRSGADETILDHQGKTAADVVGEGIEEEDQLAEDVDRMRELLANAPADKAWRRRGYLVLCRAH--PDRMQQIQDISSAQA-GMARMTVSSCTITARVSTVDGRGGGDWARLVAKVL-------ELQEEG---IFRTIVGYL 929
            TPLH+    G  AAA ALL AGAD +L     +    XXXXXXXXXXXX      HG +V+A    G+   TAL +A+  ++  AI+ L EAGANIEA+   G T                                       A A   G A++VD LLR GADET +   G TAAD+V    EE D LAEDVDR+R+LLA APAD+AWRRRG+L+L RAH    R+Q     S A A G+A+ T        R S    R   DWA +V+ ++        L  +G   IF  IVGYL
Sbjct:  492 TPLHLVAMAGRAAAAQALLDAGADVALRQNG-VGLSSXXXXXXXXXXXXXXXXXXHGGDVNAKVNNGI---TALRVASAFDKAPAIDVLTEAGANIEAQ-ANGSTPLHVASQEGRLAAGIALLRHGASVGKKNAAAQTPLHLVAAKAGSPGTAEMVDLLLRRGADETAVSENGHTAADMVVLKTEESDSLAEDVDRVRKLLARAPADRAWRRRGFLILSRAHYPGGRVQFGHRTSQAPAAGVAKRT--------RSSEEPSRAEIDWAGVVSMLMGDGVDPISLMGDGANLIFEKIVGYL 778
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BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: D7FKL4_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKL4_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 2.960e-24
Identity = 93/241 (38.59%), Postives = 116/241 (48.13%), Query Frame = 3 
Query:  222 IRVAIEHGAEVDAVK--GVAEHTALHLAAGLNEGEAINALLEAGANIEARNVLGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---ANAERQGAAKVVDSLLRSGADETILDHQGKTAADVVGEGIEEEDQLAEDVDRMRELLANAPADKAWRRRGYLVLCRAHPDRMQQIQDISSAQAGMARMTVSSCTITARVSTVDGRGGGDWARLVAKVLELQEEGIFRTIVGYL 929
            IR  IEHGA+VDA    GVA   ALH A   N+ EA++ LL AGAN  + +  G T                                            A +QG  +VVD LLR GADET +   G  AAD +G  + EED++ E+ + +R+LLANAPAD+AWRRR  LVLCRA PD+MQ   D                    R+           ARL A+VL L EEGIFRTIV ++
Sbjct:  176 IRTLIEHGADVDATNYGGVA---ALHHATANNKVEAMDVLLRAGANARSMSESGHTVLHMAAITRTRTEAATLAVLLKHGADVNAQTVGGTSVLEYVATRAGKQGIVEVVDLLLRWGADETHVAGNGMRAADAIGMKVPEEDRIPEEFEGVRKLLANAPADRAWRRRCSLVLCRARPDKMQLSSD--------------------RI-----------ARLEARVLGLVEEGIFRTIVRFI 382
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BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: D7FYD0_ECTSI (Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD0_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 9.330e-24
Identity = 108/227 (47.58%), Postives = 138/227 (60.79%), Query Frame = 3 
Query:  285 ALHLAAGLNEGEAINALLEAGANIEARNVLGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAN-AERQGAAKVVDSLLRSGADETILDHQGKTAADVVGEGIEEEDQL-AEDVDRMRELLANAPADKAWRRRGYLVLCRA--HPDRMQQIQDISSAQAGMARMTVSSCTIT--------ARVSTVDGRGGGDWARLVAKVLELQEEGIFRTIVGYL 929
            ALHLA   N+ +A+  LLEAGA+I+  +    T                XXXXXXXXXXXXXXXXXXXXXX A+ A RQG+A++VD LLR GADET  D  G+  AD VG  +E  D L   +V  + ELLANAPAD+AWRRRG LVLCRA     R++Q +D    + G++R T S   +          R  T +G  G +W     +V+EL+EEGIFR++VG+L
Sbjct:  197 ALHLAVAFNKVKAVKVLLEAGADIQGHSFSRSTPLHLASFKQPSVESAVXXXXXXXXXXXXXXXXXXXXXXAASYAGRQGSAELVDLLLRRGADETTPDRNGQQPADRVGHCMELGDVLLGHEVVLVHELLANAPADRAWRRRGLLVLCRAWLRRSRLRQ-EDGGDTRGGLSRRTRSRAKLARSDAVGAGCRRGTPEGGTGDEWRSASKRVVELEEEGIFRSVVGFL 422
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BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: D7G137_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G137_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 2.010e-23
Identity = 126/237 (53.16%), Postives = 150/237 (63.29%), Query Frame = 3 
Query:  222 IRVAIEHGAEVDAVKGVAEHTALHLAAGLNEGEAINALLEAGANIEARNVLGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANA-ERQGAAKVVDSLLRSGADETILDHQGKTAADVVGEGIEEEDQLAEDVDRMRELLANAPADKAWRRRGYLVLCRAHPDRMQQIQDISSAQAGMARMTVSSCTITARVSTVDGRGGGDWARLVAKVLELQEEGIFRTIVGYL 929
            +R+ I+HG EV+     A  TALH AA  N   AI+ L+ AGA+I+ARN+ G    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA   +R+G+ +VV  LLR GADETI+  QGKTAAD +G       +  +D +R R LL  APAD+AWRRRG LVLC A+PDR+Q                                 GGD A LV +VL L+E G+FRTIV YL
Sbjct:  186 LRMLIDHGMEVNLA--AAFGTALHWAAKANRANAIDVLVGAGADIQARNMSGSRPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKVGQRRGSVQVVGLLLRWGADETIVCKQGKTAADRIGTRRFPSTEPGDD-ERARSLLTRAPADRAWRRRGLLVLCHAYPDRLQL--------------------------------GGDLAGLVDRVLGLEEVGVFRTIVLYL 387
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BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: D7G981_ECTSI (Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G981_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 6.270e-20
Identity = 68/152 (44.74%), Postives = 89/152 (58.55%), Query Frame = 3 
Query:  504 NAERQGAAKVVDSLLRSGADETILDHQGKTAADVVGEGIEEEDQLAEDVDRMRELLANAPADKAWRRRGYLVLCRAHPDRMQQIQDISSAQAG-MARMTVSSCTITARVSTVDGRGGG---------DWARLVAKVLELQEEGIFRTIVGYL 929
            +A  +GA +VVD LLR  ADET  D  G T  ++VG    E D +  +V R+ +LL  AP D+AWRRRG LVLCRAHP+R+   Q+ S  Q   + R+T S   +  R     G G G         +W+ +V +VL L +EGIFRTIVGYL
Sbjct:  249 SAGDEGAVEVVDLLLRWNADETDDDAYGHTPGNIVGCMTPETDSMFVNVQRVWKLLQYAPQDRAWRRRGMLVLCRAHPERLGLRQNASHVQESTVLRVTRSRTKLVEREQVAGGSGEGAAADGRTAREWSNMVYRVLGL-DEGIFRTIVGYL 399
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BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: D7G1U1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U1_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 1.040e-19
Identity = 70/144 (48.61%), Postives = 81/144 (56.25%), Query Frame = 3 
Query:  501 ANAERQGAAKVVDSLLRSGADETILDHQGKTAADVVG-EGIEEEDQLAEDVDRMRELLANAPADKAWRRRGYLVLCRAHPDRMQQIQDISSAQAGMARMTVSSCTITARVSTVDGRGGGDWARLVAKVLELQEEGIFRTIVGYL 929
            A  +R G+A+VVD LLR GADETI+  QG+TAAD +G       D   ED +R R LLA APAD+AWRRRG LVLCRAHPDR+Q                                 GGD A LVA V  L+E G+FRTIV YL
Sbjct:  282 AVGQRHGSAQVVDLLLRWGADETIVSKQGETAADSIGTRRCHRTDP--EDDERARSLLARAPADRAWRRRGLLVLCRAHPDRLQL--------------------------------GGDLAGLVAGVGGLEEVGVFRTIVLYL 391
[Close]
BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Match: A0A6H5JMJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ6_9PHAE)

HSP 1 Score: 90.1 bits (222), Expect = 3.220e-17
Identity = 106/189 (56.08%), Postives = 120/189 (63.49%), Query Frame = 3 
Query:  231 AIEHGAEVDAVKGVAEHTALHLAAGLNEGEAINALLEAGANIEARNVLGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANAERQGAAKVVDSLLRSGADETILDHQGKTAADVVGEGIEEEDQLAEDVDRMRELLANAPADKAWRRRGYLVLCRAHPDRMQQIQDISSAQAGMARMT 797
            AIE GAEVDA   V E T  H AA LN  E I+ L+               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    A A  +G  +VVDSLLRSGADETILD +G+ A D++   +       E  DR+R+LL NA AD+AW RR YLVLCR HPDR         A +G+AR T
Sbjct:    4 AIERGAEVDAADAV-ERTPPHHAALLNNVEEIDVLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSATAVAGFEGDTEVVDSLLRSGADETILDSEGRAAVDMISWEVAGLHLSGEQDDRVRDLLVNAQADRAWHRRRYLVLCRTHPDR---------ADSGVARAT 182
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15597.3918.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KXK5_9PHAE7.100e-3959.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNU3_9PHAE4.510e-2935.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6X8_ECTSI4.940e-2835.64Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JHY9_9PHAE6.920e-2541.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKL4_ECTSI2.960e-2438.59Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7FYD0_ECTSI9.330e-2447.58Ankyrin repeat protein n=2 Tax=Ectocarpus TaxID=28... [more]
D7G137_ECTSI2.010e-2353.16Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
D7G981_ECTSI6.270e-2044.74Similar to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus si... [more]
D7G1U1_ECTSI1.040e-1948.61Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5JMJ6_9PHAE3.220e-1756.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig15597contigL-elsbetiae_contig15597:613..4115 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score114.0
Seed ortholog evalue6.8e-23
Seed eggNOG ortholog2880.D7FKL4
KEGG koko:K21440
Hectar predicted targeting categoryother localisation
GOsGO:0001508,GO:0002027,GO:0002262,GO:0002376,GO:0002520,GO:0003008,GO:0003012,GO:0003013,GO:0003015,GO:0003205,GO:0003230,GO:0003279,GO:0003283,GO:0003674,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0005938,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006887,GO:0006888,GO:0006928,GO:0006936,GO:0006937,GO:0006941,GO:0006942,GO:0006996,GO:0007009,GO:0007010,GO:0007154,GO:0007163,GO:0007165,GO:0007267,GO:0007275,GO:0007507,GO:0008015,GO:0008016,GO:0008092,GO:0008093,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009893,GO:0009987,GO:0010256,GO:0010468,GO:0010522,GO:0010604,GO:0010628,GO:0010638,GO:0010646,GO:0010880,GO:0010881,GO:0010882,GO:0010959,GO:0012505,GO:0014704,GO:0014731,GO:0015672,GO:0016020,GO:0016043,GO:0016192,GO:0016323,GO:0016528,GO:0016529,GO:0018130,GO:0019222,GO:0019438,GO:0019722,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019932,GO:0022898,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030011,GO:0030016,GO:0030017,GO:0030018,GO:0030029,GO:0030048,GO:0030054,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030315,GO:0030424,GO:0030507,GO:0030673,GO:0030674,GO:0030863,GO:0031252,GO:0031253,GO:0031256,GO:0031430,GO:0031647,GO:0031672,GO:0031674,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032501,GO:0032502,GO:0032589,GO:0032879,GO:0032940,GO:0032970,GO:0033013,GO:0033014,GO:0033036,GO:0033043,GO:0033267,GO:0033292,GO:0033365,GO:0034101,GO:0034394,GO:0034613,GO:0034641,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035088,GO:0035090,GO:0035556,GO:0035637,GO:0036309,GO:0036371,GO:0042383,GO:0042391,GO:0042592,GO:0042692,GO:0042995,GO:0043005,GO:0043034,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0043292,GO:0044057,GO:0044093,GO:0044237,GO:0044249,GO:0044271,GO:0044291,GO:0044304,GO:0044325,GO:0044422,GO:0044424,GO:0044425,GO:0044444,GO:0044448,GO:0044449,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045197,GO:0045199,GO:0045202,GO:0045211,GO:0046483,GO:0046903,GO:0046907,GO:0048193,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050821,GO:0050896,GO:0051049,GO:0051050,GO:0051117,GO:0051128,GO:0051130,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051239,GO:0051270,GO:0051279,GO:0051282,GO:0051641,GO:0051649,GO:0051716,GO:0051899,GO:0051924,GO:0051928,GO:0055001,GO:0055065,GO:0055072,GO:0055074,GO:0055076,GO:0055080,GO:0055082,GO:0055117,GO:0060047,GO:0060048,GO:0060090,GO:0060255,GO:0060306,GO:0060307,GO:0060341,GO:0061024,GO:0061061,GO:0061245,GO:0061337,GO:0061515,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070296,GO:0070727,GO:0070838,GO:0070972,GO:0071704,GO:0071840,GO:0071944,GO:0072359,GO:0072503,GO:0072507,GO:0072511,GO:0072657,GO:0072659,GO:0086001,GO:0086002,GO:0086003,GO:0086004,GO:0086005,GO:0086010,GO:0086012,GO:0086014,GO:0086015,GO:0086018,GO:0086019,GO:0086026,GO:0086046,GO:0086065,GO:0086066,GO:0086070,GO:0086091,GO:0090257,GO:0097060,GO:0097458,GO:0098590,GO:0098771,GO:0098794,GO:0098900,GO:0098901,GO:0098907,GO:0098910,GO:0099080,GO:0099081,GO:0099512,GO:0099568,GO:0099623,GO:0120025,GO:0120038,GO:1901016,GO:1901018,GO:1901019,GO:1901021,GO:1901360,GO:1901362,GO:1901379,GO:1901381,GO:1901564,GO:1901566,GO:1901576,GO:1903115,GO:1903169,GO:1903522,GO:1903779,GO:1904062,GO:1904064,GO:1904427,GO:1990778,GO:2001257,GO:2001259
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Exons2
Model size1541
Cds size507
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig15597.3918.1prot_L-elsbetiae_contig15597.3918.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig15597 3184..3690 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815638.0790336-UTR-L-elsbetiae_contig15597:612..12141622815638.0790336-UTR-L-elsbetiae_contig15597:612..1214Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15597 613..1214 -
1691683006.83068-UTR-L-elsbetiae_contig15597:612..12141691683006.83068-UTR-L-elsbetiae_contig15597:612..1214Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15597 613..1214 -
1622815638.0938962-UTR-L-elsbetiae_contig15597:3176..31831622815638.0938962-UTR-L-elsbetiae_contig15597:3176..3183Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15597 3177..3183 -
1691683006.843335-UTR-L-elsbetiae_contig15597:3176..31831691683006.843335-UTR-L-elsbetiae_contig15597:3176..3183Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15597 3177..3183 -
1622815638.1165876-UTR-L-elsbetiae_contig15597:3690..41151622815638.1165876-UTR-L-elsbetiae_contig15597:3690..4115Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15597 3691..4115 -
1691683006.8668523-UTR-L-elsbetiae_contig15597:3690..41151691683006.8668523-UTR-L-elsbetiae_contig15597:3690..4115Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig15597 3691..4115 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815638.1045969-CDS-L-elsbetiae_contig15597:3183..36901622815638.1045969-CDS-L-elsbetiae_contig15597:3183..3690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15597 3184..3690 -
1691683006.856427-CDS-L-elsbetiae_contig15597:3183..36901691683006.856427-CDS-L-elsbetiae_contig15597:3183..3690Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig15597 3184..3690 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig15597.3918.1

>prot_L-elsbetiae_contig15597.3918.1 ID=prot_L-elsbetiae_contig15597.3918.1|Name=mRNA_L-elsbetiae_contig15597.3918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=169bp
MALLKHNADANARDSAQRTPLHRAAANAERQGAAKVVDSLLRSGADETIL
DHQGKTAADVVGEGIEEEDQLAEDVDRMRELLANAPADKAWRRRGYLVLC
RAHPDRMQQIQDISSAQAGMARMTVSSCTITARVSTVDGRGGGDWARLVA
KVLELQEEGIFRTIVGYL*
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mRNA from alignment at L-elsbetiae_contig15597:613..4115-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig15597.3918.1 ID=mRNA_L-elsbetiae_contig15597.3918.1|Name=mRNA_L-elsbetiae_contig15597.3918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3503bp|location=Sequence derived from alignment at L-elsbetiae_contig15597:613..4115- (Laminarionema elsbetiae ELsaHSoW15)
AGGGGAAAACAGAGATTGTGCAGCTGTTGTTGGTCAAGGGAGCCGACAAG
GACGCGTTGGACAACATCAAACGCACACCGCTTCATGTGGCCACCTCGTA
TGGTCATGTGGCTGCCGCACTAGCTCTTTTGGCTGCCGGCGCGGACGCCA
GCCTCTGGTCCGGCGAATATATTAAGGAGACGGTAGTGCACGTGGCGGCT
CAAGGGGGGCATGTTGGCATCATACGAGTGGCGATCGAGCACGGGGCGGA
AGTGGACGCTGTGAAAGGTGTGGCCGAACACACAGCCCTTCATTTGGCTG
CAGGTCTCAACGAGGGGGAGGCGATCAATGCGCTCTTGGAAGCTGGGGCC
AACATCGAAGCACGGAATGTTTTGGGCTGTACACCTCTCCACTTTGCTGC
CCATCGGGCCAGTCTCGAAGCCTTGATGGCCCTCTTGAAGCACAATGCGG
ACGCCAACGCCCGAGATAGTGCCCAAAGAACGCCGTTGCACCGGGCCGCA
GCCAATGCGGAGAGGCAAGGAGCCGCGAAGGTGGTTGACTCTCTGTTGAG
GTCAGGTGCGGATGAGACCATCCTCGACCACCAAGGCAAAACAGCCGCGG
ATGTTGTGGGGGAGGGAATCGAAGAAGAAGACCAACTGGCCGAGGATGTC
GACCGCATGCGCGAGCTGTTGGCGAACGCTCCGGCCGACAAGGCATGGCG
TCGGCGGGGCTACCTGGTGTTGTGCCGCGCACACCCCGATAGAATGCAGC
AGATCCAGGACATCAGCAGTGCGCAGGCTGGCATGGCAAGAATGACTGTA
AGCAGCTGCACCATAACAGCAAGAGTCAGCACAGTGGATGGACGAGGTGG
AGGCGACTGGGCTAGACTGGTGGCGAAGGTGCTGGAGTTGCAAGAAGAAG
GCATCTTCCGGACGATCGTGGGGTATCTGTGAGAAGCCGGTGAGGCACAT
TGTGTACATGCACCAATCCATCACTTCATGGAAAATATCGCTGGGTTTCA
TTTAAAACGGGTGGGAGTACCCCCGTGTTTTGGTCATTTGATTTATGTGT
GTGGATACCAACATTGTGCACGTCATGGTGGAAGTTTCCTGTAGATTTGT
CGAGGTGAGTGCTTCCCCGGTCGAACATGCCGCATTTTAAGGTTGAATCT
GGGGTAGCCATTTCTTCGGGTTGCTGTGTGTGCTGTTCCCCTGTGTGTGC
TGTGCGTGTCTGTGTGTATTGTCTTCACGCTATAAACCGTTCCATAAACC
GTTCCGATCTCTCTATCCAGTACCTCCATGAGTGAGTCCGTACTAGTCCA
ACACTGACGCAGTCGATTCCCGTGGTCATAAGATCATTTACCCTAAAAAG
GGTATGCTGAAAAAATGAACTAAATAAAATGGACCTGAAGGGTCCACAAA
GCATAAAACACAAAGTACCACGCACAGATGGTCTGGAGCCCTACGCCCCC
CTCTACACGCTATGCGAGGTGAAAACAAAACTGGAAAAGCCAACATCACC
AACCACGGGGGATACACCCCCTGGTTCTATCTTGGTATACCCCGACAATG
CCGGGGTGTTCCGCGCCGGGTTCTCGCCGGTCAGGCCCACCAACCTAGTC
CTCCTCACCCATAGTATCGCACACTTGTTACAGTAAGAGGGAAAAGGACT
TCGGACAATAAACAAGCCGAAAATACAAACAAACAAACAAACAAACTAGC
AGACACACATAAAAAGCGCCATCTGGCTAAATCTGCTTGGAATGTGCCGA
ATTTCCGCGAGACAAAAGCTGAGCAAAGACTCAGGTGAACCAGCGCCTTC
GAGTGGCCTCGATGCACAGGACATGAAACAGTCCTCTCCACCCTTTTTTG
CTGCGTTTTGTTTACCGCTGGGACATGTACGATGTAAAAGGGTCTAATGA
TTCATGAGTTGATGACCAATATCTCGGCCCTCTTTGTGGCAAATGCACTT
GAGACAGAATGTGGTTGTATCCCCTTCACCCTCGGCACAGCTTTCGCCTA
TTGGCGAGTCTTTGAGCGAATACGGCTAGAATGCATGTGTCGATTCGGCT
GTATGCAGCCGTCAAAGGCGTGCCGTGTCTCCACGTGTCGTTCGTTCTTG
CGAACCCCTTTTTTTGGCGCACGCCCTCCGCGCGCCACTCCGCGAAGATC
GACGCGACATGCATTCCGACACCTAACGGCTCGAATCAATTCTCCCCGTC
ACTGCTGAAGTGCTGTGAGACGAGGCCCGCATCCTCGGGTTGAAGAAGAC
CAATGAGAAAGAACATTGGCGCTGTATACCTCGTGGAGAAAGTTGTCAAG
AATACCCTCTCCTCCTTGCAATCAACACATACGTGCGTCCTGACGTACCT
GCAACGCTAGGACGGCCGCTTCCAGCACGTTTGCTGCGAGCCCGCGGCAT
TTCCTACGACTCAGGCGAAATCCTCTTTCGTGTTCCCCGTCCCCCCCTAG
ACCATGGCCGGCGGTATGATAAAACCCTTGTCGATGCTCCCCCCGGTGGT
CTACAATAGGGCAGTTGATTATTGGGCCTTTTGCCTTGGCCCAAAATCTG
ATCGCCCCCCTGCGCGACATCCGCTGCGTTGTTGCATTGGTTTTCATCAA
ACGCGTGGCAACGACGTTTCGCCTTCCTAACGTCCGACACTTCAAGTGCA
TTTAGAGACGGTTCTGGGCGCAGAAGGCACCCTGCCCTGGGTGTGGGGGG
TGTCCGATGCCACCCTACCCCCTTTCGGGCCAAGAAATACATACGCAAAA
ACAGTAGGAGTACTTGATCAGGAAGTCACATGATGAGAGCAACGGAGTTC
GAGGTGTCGTGCAGTGAAGTCTAACCCTATCCGCCCCCCCTGTGCGACCG
TCCATTCTTCCGCGTCATGCCCACCAACGGGGGGTTACATCGGTATTCCA
GACACCGACACTCTCCACCGGACGGGAGCATGCTCGCCGACCGCGATTGC
AGTCATGGACCAGGAGGTGGTTTGACCGACATCATTTGGCTGGTCTTGGG
CGTTGGCTGGTCGGGGTGTTGTTGCGACTTTTGAATAGGCGGCAGCGATG
GCGTCGGTGGTGCTGGCAAATGGCCATGTATGGTTTGCCGTATGTACAAA
GGCTGGCGGGTTCCAAAGAAGGGGGCAAATTGGCTGTCTTGTTGTGAAAA
AAGATCCCTGACGGTTGCTTTGGGCTCCCGAGATTGGCTGCTTGTGATGA
GTGACATAGTGACGTGCCGAGAGAGAGAGGTTGGAGGTGTGCGAACGGAA
GATCAACCAAACGTGCGGTGAGGGAAGACAGCAGAGTGGACGGTGGTGTC
GAATGGCTATCTATCTAGATATGCGTAGCGGGAGCGTGACGAAGAATGCG
AGATATCTCCCCGGCAGTTCCTGTGAAAACGCTCTTGAGCTTACATAGTA
TGTAGTGGGTGCACGTGGTTTGTCGCTGCTACGTTGTAGGTACGGTGACG
AACATCTCGAAAAAGGGGGCTCCAAACTGGGTAAAGGTACCCGGATAGCG
GCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig15597:613..4115-

>mRNA_L-elsbetiae_contig15597.3918.1 ID=mRNA_L-elsbetiae_contig15597.3918.1|Name=mRNA_L-elsbetiae_contig15597.3918.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1014bp|location=Sequence derived from alignment at L-elsbetiae_contig15597:613..4115- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCCTCTTGAAGCACAATGCGGACGCCAACGCCCGAGATAGTGCCCA
AAGAACGCCGTTGCACCGGGCCGCAGCCAATGCGGAGAGGCAAGGAGCCG
CGAAGGTGGTTGACTCTCTGTTGAGGTCAGGTGCGGATGAGACCATCCTC
GACCACCAAGGCAAAACAGCCGCGGATGTTGTGGGGGAGGGAATCGAAGA
AGAAGACCAACTGGCCGAGGATGTCGACCGCATGCGCGAGCTGTTGGCGA
ACGCTCCGGCCGACAAGGCATGGCGTCGGCGGGGCTACCTGGTGTTGTGC
CGCGCACACCCCGATAGAATGCAGCAGATCCAGGACATCAGCAGTGCGCA
GGCTGGCATGGCAAGAATGACTGTAAGCAGCTGCACCATAACAGCAAGAG
TCAGCACAGTGGATGGACGAGGTGGAGGCGACTGGGCTAGACTGGTGGCG
AAGGTGCTGGAGTTGCAAGAAGAAGGCATCTTCCGGACGATCGTGGGGTA
TCTGTGAATGGCCCTCTTGAAGCACAATGCGGACGCCAACGCCCGAGATA
GTGCCCAAAGAACGCCGTTGCACCGGGCCGCAGCCAATGCGGAGAGGCAA
GGAGCCGCGAAGGTGGTTGACTCTCTGTTGAGGTCAGGTGCGGATGAGAC
CATCCTCGACCACCAAGGCAAAACAGCCGCGGATGTTGTGGGGGAGGGAA
TCGAAGAAGAAGACCAACTGGCCGAGGATGTCGACCGCATGCGCGAGCTG
TTGGCGAACGCTCCGGCCGACAAGGCATGGCGTCGGCGGGGCTACCTGGT
GTTGTGCCGCGCACACCCCGATAGAATGCAGCAGATCCAGGACATCAGCA
GTGCGCAGGCTGGCATGGCAAGAATGACTGTAAGCAGCTGCACCATAACA
GCAAGAGTCAGCACAGTGGATGGACGAGGTGGAGGCGACTGGGCTAGACT
GGTGGCGAAGGTGCTGGAGTTGCAAGAAGAAGGCATCTTCCGGACGATCG
TGGGGTATCTGTGA
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