mRNA_L-elsbetiae_contig1557.3909.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1557.3909.1
Unique NamemRNA_L-elsbetiae_contig1557.3909.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: D7FTE6_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE6_ECTSI)

HSP 1 Score: 608 bits (1567), Expect = 3.990e-212
Identity = 290/485 (59.79%), Postives = 353/485 (72.78%), Query Frame = 3 
Query:  111 EILLASYIRAGQAADAGQAVCLDEYRMLGCYADSDSNRILP------AGILSDSGVMSTQLCYQICDDGLNTHFGTQNSHECWCGVEPELSKNGPELHLSDCNMLCAGSTVGEVCGGFKAMTMFEMLTYQGCQDRTLDHRVTQAPP-ISGSDDEQIIGRPWDYQDKFDPT-ILFASTATSSSPSRGIA-AEMCNVDDQHRELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVARCLRKNGVVPSDTRDYFGRERFHPFTPALHLGYDKTQALADSVA---KLVSGIMKEAIDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSCPE 1529
            ++L+A+  + G  AD         Y   GC+ADS  +RI+P         ++  G MS + CY ICDDGLNTHFG + S ECWC VEP+L+K+GPEL   +C+ LC G+T  E CGGF  M+++E+  YQGC     +  V   P  + GS+D+QIIG+PWD+Q+KFDP    F+    SSS S  +     C+V+D H++L+    VW+G+ KT PRVFCGI+TH+ NH+TKVKAIK TWASHCDGFVAFSD  DLEL TF IKHEGPE YTNMWQKSRAIWKYINFHYK+DFDWFVLGGDDLF++VENLRKYLLS+EV RAAGG E+GGT P+YLGRRLR FG  +RIYNNGGASYVLNQA+VGLLA HLDDD C PH++K WED+L+  CL+KNGV P DTRD  GRERFHPFTP  H GY K   L +      K+ +  + +AIDLKFGRECCS DS+SFH+VDE+LM RL+ L Y CPE
Sbjct:   17 DLLVAASCKDGYPAD---------YSPRGCFADSTIDRIMPNIRLVHLQEMTQQGPMSAETCYFICDDGLNTHFGMEYSTECWCAVEPDLTKHGPELDPIECDHLCFGTTTDEYCGGFNKMSVYEITAYQGCHSEDFEVPVEHVPAWVPGSEDKQIIGQPWDFQEKFDPVNFFFSDRGDSSSFSNHVRNGSSCDVEDDHKKLLDQTHVWQGARKTTPRVFCGIYTHQNNHATKVKAIKETWASHCDGFVAFSDAADLELQTFMIKHEGPEEYTNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFIIVENLRKYLLSEEVKRAAGGLENGGTTPVYLGRRLRGFGDDNRIYNNGGASYVLNQASVGLLADHLDDDDCQPHTKKPWEDVLIGSCLKKNGVEPFDTRDNLGRERFHPFTPGAHFGYRKPPKLENRHVPGCKVGAWYLIQAIDLKFGRECCSDDSISFHYVDEQLMRRLHDLLYLCPE 492
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: D7FK39_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK39_ECTSI)

HSP 1 Score: 570 bits (1469), Expect = 4.560e-192
Identity = 278/462 (60.17%), Postives = 329/462 (71.21%), Query Frame = 3 
Query:  159 GQAVCLDEYRMLGCYADSDSNRILPAGILSDSGVMSTQLCYQICDDGLNTHFGTQNSHECWCGVEPELSKNGPELHLSDCNMLCAGSTVGEVCGGFKAMTMFEMLTYQGCQDRTLDHRVTQ-APPISGSDDEQIIGRPWDYQDKFDPTILFASTATSSSPSRGIAAEMCNVDDQHRELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVARCLRKNGVVPSDTRDYFGRERFHPFTPALHLGYDKTQALADSVAKLVSGI------MKEAIDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSC 1523
            G A C  ++  +GCYADS   RIL +        MS ++CY  CDDG+NTHFG Q S ECWCG+ PEL++NG EL   +C+ LCAG+T GE+CGGF  M++FE+  Y+GCQ   LD  + + +PPISGS+D QI+G+PWDYQ+K D T   +  A S  P        C+ +D H++L+A V+VW G+ KT PR+FCGI T   NH T VKAIK TWASHCDGFVAFSD TD EL T KIK EG E   NMWQKSRAIWKYINFHYK DFDWF+LGGDDLF++ ENLRKYLLSDEV  A GG ++GG NPMYLGRRLR FG+ HR+YNNG ASYVLNQA+VGLLASHLDDD C PH +  WED+LV+ CL+KNGV   DTRD  GRERFHPFTPA H G       AD   +L SGI      M + +D KFGRE  S DSLSF+ VDE+LM RLY L YSC
Sbjct:   32 GLAGCPADFSFVGCYADSVGKRILNSR--GQHNPMSAEMCYMFCDDGVNTHFGMQYSGECWCGIHPELNQNGEELAAGECDFLCAGTTTGEICGGFLKMSVFEITAYKGCQYEALDQPIGRGSPPISGSEDTQIVGQPWDYQEKIDGTNFLS--AQSDLPGA------CDGNDDHQKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKAIKETWASHCDGFVAFSDKTDQELSTLKIKREGLEEEGNMWQKSRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGIKNGGANPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHFGQHMPLDPAD---RLASGIVVNAWYMDQEVDAKFGREGYSSDSLSFNDVDEQLMRRLYHLVYSC 480
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: D7FK31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK31_ECTSI)

HSP 1 Score: 544 bits (1402), Expect = 2.700e-188
Identity = 258/430 (60.00%), Postives = 319/430 (74.19%), Query Frame = 3 
Query:  273 LCYQICDDGLNTHFGTQNSHECWCGVEPELSKNGPELHLSDCNMLCAGSTVGEVCGGFKAMTMFEMLTYQGCQDRTLDHRVTQAPPISGSDDEQIIGRPWDYQDKFDPTILFASTATSS-SPSRGIAAEMCNVDDQHRELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVARCLRKNGVVPSDTRDYFGRERFHPFTPALHLGYDKTQALADSVAKLVSGIMK------EAIDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSCPEVSKG 1541
            +CY +CDDGLNTHFGT +S EC CG+ PEL+ +G +L   +C+  CAG   G+ CG    M +FE+  YQGC        V        S D Q IG PWDYQ KFD T  F  T  SS S      AE C+++D H++L+A V VW  +    PRVFCGI+TH+ NH+TKV AIK TWA HCDGFVAFSDV D  + +FKIKHEGPE Y+NMWQKSRAIWKYINFHYK+DFDWFVLGGDDLF+++ENLRKYLLSDE+ RAAGG ++GGTNPM+LGRRL+RFG+ HRIYNNGGASYV+NQA+VGLL +HLDD  C PH+++SWED+LV+RCL+ NGV+  DTRD  GRERFHPF+PA+H+GY   +   D   +LVSG +       +AI+L+FG ECCS+DS+SFH++DE+LM RLY L YSCPE ++G
Sbjct:    1 MCYMLCDDGLNTHFGTLSSRECRCGINPELNIDGGKLEPIECDHHCAG---GDDCGESHNMVVFEITAYQGCPPE-----VEALDDPDSSQDGQKIGEPWDYQKKFDTTNFFKFTEASSFSWVDEEPAEECDINDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHQNNHATKVMAIKETWARHCDGFVAFSDVADDAILSFKIKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIMENLRKYLLSDEIIRAAGGLQNGGTNPMFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSQCQPHTKQSWEDVLVSRCLKVNGVMAFDTRDDLGRERFHPFSPAVHIGYRMPETPED---RLVSGFLVGGWYGIQAIELQFGLECCSQDSISFHYIDEQLMRRLYHLVYSCPEEAEG 419
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: A0A6H5L1N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1N0_9PHAE)

HSP 1 Score: 510 bits (1313), Expect = 8.440e-171
Identity = 267/498 (53.61%), Postives = 322/498 (64.66%), Query Frame = 3 
Query:  159 GQAVCLDEYRMLGCYADSDSNRILPAGILSDSGVMSTQLCYQICDDG-----------LNTHFG----------TQNSHECWCGVEPELSKNGPELHLSDCNMLCAGSTVGEVCGGFKAMTMFEMLTYQGCQDRTLDHRVTQ-APPISGSDDEQIIGRPWDYQDKFDPTILFASTATSSSPSRGIAAEMCNVDDQHRELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVK---AIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVARCLRKNGVVPSDTRDYFGRERFHPFTPALHLGYDKTQAL------------ADSVAKLVSGI------MKEAIDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSC 1523
            G A C  ++  +GCYADS   RI  +        MS +        G            N  FG           + + +CWCG+ PEL++NG EL   +C+ LCAG+T GE+CGGF  M++FE+  Y GCQ   LD  + + +PPISGS+D QI+G+PWD+Q+K D T  F ST  S+ P        C  +D H++L+A V+VW G+ KT PR+FCGI T   NH T VK   AIK TWASHCDGFVAFSD TD +L+T KIK EG E   NMWQK RAIWKYINFHYK DFDWF+LGGDDLF++ ENLRKYLLSDEV  A GG  +GGTNPMYLGRRLR FG+ HR+YNNG ASYVLNQA+VGLLASHLDDD C PH +  WED+LV+ CL+KNGV   DTRD  GRERFHPFTPA H GY+    +             D   +L SGI      M + +D+KFGRE  S DSLSF+ VDE+LM RLY L YSC
Sbjct:   32 GLAGCPADFSFVGCYADSVGKRIFNSR--GQHYPMSAEEVQPYATYGDVYFPHPELLPYNLLFGHPPLDFLLDPPRINTKCWCGIHPELNQNGEELAAGECDFLCAGTTTGEICGGFLKMSVFEITAYMGCQYEALDQPIGRGSPPISGSEDTQIVGQPWDFQEKIDATN-FLSTQ-SALPGA------CGRNDDHKKLLAQVRVWEGAAKTAPRIFCGISTRHQNHRTNVKVGRAIKETWASHCDGFVAFSDKTDQDLNTLKIKREGLEEDGNMWQKIRAIWKYINFHYKEDFDWFILGGDDLFLIAENLRKYLLSDEVKSAGGGINNGGTNPMYLGRRLRVFGEDHRMYNNGRASYVLNQASVGLLASHLDDDDCQPHRKTPWEDLLVSMCLKKNGVSAFDTRDTLGRERFHPFTPATHFGYEPIFFMNLYVDVFGQHMPVDPADRLASGIVVNGWYMDQEVDVKFGREGYSSDSLSFNDVDEQLMWRLYHLVYSC 519
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: A0A6H5JVG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG9_9PHAE)

HSP 1 Score: 483 bits (1244), Expect = 2.830e-164
Identity = 244/424 (57.55%), Postives = 301/424 (70.99%), Query Frame = 3 
Query:  336 CWCGVEPELSKNGPELHLSDCNMLCAGSTVGEVCGGFKAMTMFEMLTYQGC--QDRTLDHRVTQAPPISGSDDEQIIGRPWDYQDKFDPTILFASTATSS-SPSRGIAAEMCNVDDQHRELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRK-YLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVA------------RCLRKNGVVPSDTRDYFGRERFHPFTPALHLGYDKTQALADSVAKLVSGIMK------EAIDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSCPEVSKG 1541
            C CG+ PEL+ +G +L   +C+  CA    G  CG  + M +FE+  YQ C  +   LD+      PIS S D Q IG PWDYQ+KFD T  F  T  SS S      AE C+++D H++L+A V VW  +    PRVFCGI+TH  NH+TKV AIK TWA HCDGFVAFSDV D  +    IKHEGPE Y+NMWQKSRAIWKYINFHYK+DFDWFVLGGDDLF++VENLRK YLLSDE+ RAAGG ++GGTNP++LGRRL+RFG+ HRIYNNGGASYV+NQA+VGLL +HLDD  C PH+++SWED+LV+            RCLR NGV+  DTRD  GRERFHPF+PA+H+GY   +   D   +LVSG +       +AI+L FG ECCS+DS+SFH++DE+LM RLY L YSCPE ++G
Sbjct:   17 CRCGINPELNIDGGKLEPIECDRHCAD---GNDCGESRNMAVFEITAYQICPREAEALDN------PIS-SQDGQKIGEPWDYQEKFDTTNFFKFTEDSSFSWVDEEPAEECDINDDHKKLLAQVDVWEDAVTNSPRVFCGIYTHHKNHATKVMAIKETWARHCDGFVAFSDVADDAI--LSIKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKVYLLSDEIIRAAGGLQNGGTNPIFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSRCQPHAKQSWEDVLVSISRASFKKTEVSRCLRNNGVMAFDTRDGLGRERFHPFSPAVHIGYRMPETPED---RLVSGFLVGGWYGIQAIELTFGLECCSQDSISFHYIDEQLMRRLYHLVYSCPEEAEG 425
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: D7FK30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK30_ECTSI)

HSP 1 Score: 468 bits (1205), Expect = 1.350e-159
Identity = 230/382 (60.21%), Postives = 271/382 (70.94%), Query Frame = 3 
Query:  402 MLCAGSTVGEVCGGFKAMTMFEMLTYQGCQDRTLDHRVTQAPPISGSDDEQIIGRPWDYQDKFDPTILFASTATSSSPSRGIAAEMCNVDDQHRELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVARCLRKNGVVPSDTRDYFGRERFHPFTPALHLGYDKTQALADSVAKLVSGIMKEA------IDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSCPE 1529
            MLC G+T+GE CGG   M+++E+ +YQGC     D     A     S+ +QI+G                                   +D H++L+A + VW G+ +  PR+FCGI+TH  NH+TKVKA+K TWASHCDGFVAFSDVTDLELHTFKIKHEGPE Y+NMWQK+RAIWKYINFHYK+DFDWFVLGGDDLF++VENLRKYLLSDE+  AAGG E+GG NPMYLGRR R  G+  RIYNNGG SYVLNQA+VGLLASHLDDDAC PH+ K WEDILVA CL+KNGV   DTRD  GRERFHPFTPA H GY   Q L D   +LVSG +  A      IDLKFGRECCS+DSLSFH+V E++  RL+ L Y+CP+
Sbjct:    1 MLCDGTTIGETCGGIHKMSVYEITSYQGCDSEEFDVLSQHA----SSEHQQIMG-----------------------------------EDDHKKLLAQIDVWEGAEEGAPRIFCGIYTHENNHATKVKAVKETWASHCDGFVAFSDVTDLELHTFKIKHEGPEEYSNMWQKARAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKYLLSDEIKGAAGGLENGGPNPMYLGRRFRFIGED-RIYNNGGPSYVLNQASVGLLASHLDDDACQPHAAKHWEDILVAWCLKKNGVEAFDTRDALGRERFHPFTPAAHFGYRMPQKLED---RLVSGCVVGAWYIIQGIDLKFGRECCSQDSLSFHYVGEQVSRRLHDLIYACPK 339
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: A0A6H5JMC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC5_9PHAE)

HSP 1 Score: 441 bits (1133), Expect = 1.470e-147
Identity = 212/341 (62.17%), Postives = 256/341 (75.07%), Query Frame = 3 
Query:  522 APPISGSDDEQIIGRPWDYQDKFDPTILFASTATSS-SPSRGIAAEMCNVDDQHRELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVARCLRKNGVVPSDTRDYFGRERFHPFTPALHLGYDKTQALADSVAKLVSGIM------KEAIDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSC 1523
            +P +  S + +     W+ QDKFD       T  S+ S S   +++ C  +D H+E+++ V VW G++KT+PR+FCGIFTH+ NH TKVKAIK TWA++CDGFVAFSD  D +LHTF+I+HEGPE Y NMWQKSRAIWKYINFHYKNDFDWF+LGGDDLFV+VENLRKYLLSD++ RAAGGR +GG NPMYLGRRLR F     I+N+GGASYVLNQA+V LLAS+LD+DAC PH + SWED++VA CL+KNGVV  DTRD  GRERFHP+TPA+H GY       D   + VSGI+        AIDL FG E CS DSLSFH+VDE+LM RLY L YSC
Sbjct:   75 SPSLLTSKEHKRFTASWNDQDKFDTRKFLLPTQHSTPSLSGNSSSKACGTNDDHKEMLSHVDVWEGASKTMPRIFCGIFTHKKNHFTKVKAIKETWAANCDGFVAFSDAADPDLHTFQIEHEGPEEYDNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDDIMRAAGGRINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVRLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDESGRERFHPYTPAVHFGYRMPMRPED---RFVSGIVVGDWYISMAIDLVFGLEGCSSDSLSFHYVDEDLMRRLYHLVYSC 412
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: D7FK28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK28_ECTSI)

HSP 1 Score: 442 bits (1136), Expect = 5.100e-147
Identity = 213/325 (65.54%), Postives = 250/325 (76.92%), Query Frame = 3 
Query:  570 WDYQDKFDPTILFASTATSSSPSRG-IAAEMCNVDDQHRELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVARCLRKNGVVPSDTRDYFGRERFHPFTPALHLGYDKTQALADSVAKLVSGIMKE------AIDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSC 1523
            W+ QDKFD   +F  T  S+S   G  +A  C ++D H++++  V VW G++KT+PR+FCGIFTHR NH TKVKAIK TWA +CDGFVAFSD  D +LHTF+I+HEGPE Y NMWQKSRAIWKYINFHYKNDFDWF+LGGDDLFV+VENLRKYLLSDE+  AAGG  +GG NPMYLGRRLR F     I+N+GGASYVLNQA+VGLLAS+LD+DAC PH + SWED++VA CL+KNGVV  DTRD  GRERFHP+TPA+H GY       D   +LVSGI+        AIDL FG E CS DSLSFH+VDE+LM RLY L YSC
Sbjct:  143 WNDQDKFDTKKIFLPTQYSTSSLSGDSSARACAMNDDHKKMLTHVDVWEGASKTMPRIFCGIFTHRKNHFTKVKAIKETWAVNCDGFVAFSDAADPDLHTFQIEHEGPEEYGNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDEIMHAAGGGINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVGLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDASGRERFHPYTPAVHFGYRTPMRPED---RLVSGIVVGDWYIGMAIDLIFGLEGCSSDSLSFHYVDEDLMRRLYHLVYSC 464
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: D7G568_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G568_ECTSI)

HSP 1 Score: 427 bits (1097), Expect = 1.490e-142
Identity = 201/330 (60.91%), Postives = 249/330 (75.45%), Query Frame = 3 
Query:  546 DEQIIGRPWDYQDKFDPTILFASTATSSSPSRGIAAEMCNVDDQHRELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVARCLRKNGVVPSDTRDYFGRERFHPFTPALHLGY--DKTQALADSVAKLVSGIMKEAIDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSCPE 1529
            +EQ+IG+PW+YQ KFDP   F S+  + +    +   +C+++D H++L+A V VW G+ KT PR+FCG++T+  NH TK+KAIK TWAS CDGFVAFSD  DL + +FKIKHEGPE + NMWQKSRAIWKYI+ HY NDFDWFVLGGDD+F++VENLRKYLLSD++ +AAGG + GG+ PMYLGRR R  G + RI+N+GGA+Y+LNQ +V LLASHLDD +CHPH + SWED+ VA CLR++GVV  DTRD  GRERFHPFTP  HL Y   KT    D         +  +IDLK GRECCSR SLSFH+VDE LM RLY L YSCP+
Sbjct:   61 EEQMIGKPWNYQQKFDPNHFFRSSQWAPT-LYALPEGVCDLNDSHKQLIAQVDVWGGAAKTAPRIFCGVYTYHANHDTKIKAIKETWASRCDGFVAFSDQVDLAVPSFKIKHEGPEEWDNMWQKSRAIWKYIDRHYINDFDWFVLGGDDIFLIVENLRKYLLSDDIKKAAGGFKDGGSVPMYLGRRFRPKGNNDRIFNSGGAAYLLNQKSVRLLASHLDDPSCHPHQQCSWEDVNVAACLRQHGVVAHDTRDGLGRERFHPFTPGQHLMYRVPKTNPEKD-------WYVDYSIDLKIGRECCSRYSLSFHYVDENLMRRLYHLVYSCPK 382
[Close]
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Match: A0A7S2SKC8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKC8_9STRA)

HSP 1 Score: 283 bits (724), Expect = 2.200e-82
Identity = 148/323 (45.82%), Postives = 202/323 (62.54%), Query Frame = 3 
Query:  582 DKFDPTILFASTATSSSPSRGI----AAEMCNVDDQHRELM---ALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVAFSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLGGDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRIYNNGGASYVLNQAAVGLLASH-LDDDACHPHSRKSWEDILVARCLRKNG-VVPSDTRDYFGRERFHPFTPALHLGYDKTQALADSVAKLVSGIMKEAIDLKFGRECCSRDSLSFHHVDEELMSRLYQLAYSC 1523
            D+ DP +L    + +  P +      A + C   D H EL+   AL       T    R+FC ++T +  H T ++A++ TWAS CDGFV  SD+TD  + T  + HEGPE Y N+WQK R+IW Y+  HY +D+D+F +GGDDL+V+VENLR YL S E+  A+   +HG T P++LGRR  + G   RI+N+GG+ Y+LNQA++ +LA +  D+ AC+PH +  +ED+LVA CLRK   V P DTRD  GRERFHPFTPA HL Y  +    D  AK  S       DLK G+ECCS  S++FH+V  +LM RL+ L Y+C
Sbjct:  478 DQVDPKLL---VSLAQDPHQNFPPLPAKQECQRRDGHSELLHQVALASPEEYETPVRSRIFCMVYTIQKQHQTSIRAVRETWASKCDGFVTMSDLTDPSIPTLNVPHEGPEEYNNIWQKVRSIWLYVYTHYFDDYDYFYIGGDDLYVIVENLRLYLNSKEIVEAS---DHG-TRPLFLGRRFAQNGNKDRIFNSGGSGYILNQASLRILAENSADNAACNPHIKGFYEDVLVAACLRKVAQVFPYDTRDAHGRERFHPFTPAAHLSYRISPKNPDWYAKYSS-------DLKQGKECCSSHSIAFHYVKPQLMRRLHALLYAC 786
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1557.3909.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTE6_ECTSI3.990e-21259.79WSC domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FK39_ECTSI4.560e-19260.17WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FK31_ECTSI2.700e-18860.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1N0_9PHAE8.440e-17153.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVG9_9PHAE2.830e-16457.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK30_ECTSI1.350e-15960.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMC5_9PHAE1.470e-14762.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK28_ECTSI5.100e-14765.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G568_ECTSI1.490e-14260.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SKC8_9STRA2.200e-8245.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1557contigL-elsbetiae_contig1557:6997..17405 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score608.2
Seed ortholog evalue3.3e-171
Seed eggNOG ortholog2880.D7FTE6
KEGG koko:K00731
KEGG ReactionR05908
KEGG Pathwayko00512,ko01100,map00512,map01100
KEGG ModuleM00056
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
EggNOG OGsKOG2246@1,KOG2246@2759
EC2.4.1.122
COG Functional cat.S
CAZyGT31
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons10
Model size1727
Cds size1467
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1557.3909.1prot_L-elsbetiae_contig1557.3909.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1557 7080..17228 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815637.285308-UTR-L-elsbetiae_contig1557:6996..70791622815637.285308-UTR-L-elsbetiae_contig1557:6996..7079Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1557 6997..7079 +
1691683006.319958-UTR-L-elsbetiae_contig1557:6996..70791691683006.319958-UTR-L-elsbetiae_contig1557:6996..7079Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1557 6997..7079 +
1622815637.4111588-UTR-L-elsbetiae_contig1557:17228..174051622815637.4111588-UTR-L-elsbetiae_contig1557:17228..17405Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1557 17229..17405 +
1691683006.4305527-UTR-L-elsbetiae_contig1557:17228..174051691683006.4305527-UTR-L-elsbetiae_contig1557:17228..17405Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1557 17229..17405 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815637.2984247-CDS-L-elsbetiae_contig1557:7079..71641622815637.2984247-CDS-L-elsbetiae_contig1557:7079..7164Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 7080..7164 +
1691683006.3308825-CDS-L-elsbetiae_contig1557:7079..71641691683006.3308825-CDS-L-elsbetiae_contig1557:7079..7164Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 7080..7164 +
1622815637.310639-CDS-L-elsbetiae_contig1557:12017..121211622815637.310639-CDS-L-elsbetiae_contig1557:12017..12121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 12018..12121 +
1691683006.343285-CDS-L-elsbetiae_contig1557:12017..121211691683006.343285-CDS-L-elsbetiae_contig1557:12017..12121Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 12018..12121 +
1622815637.3249798-CDS-L-elsbetiae_contig1557:12554..126171622815637.3249798-CDS-L-elsbetiae_contig1557:12554..12617Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 12555..12617 +
1691683006.3546674-CDS-L-elsbetiae_contig1557:12554..126171691683006.3546674-CDS-L-elsbetiae_contig1557:12554..12617Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 12555..12617 +
1622815637.3365107-CDS-L-elsbetiae_contig1557:13411..137431622815637.3365107-CDS-L-elsbetiae_contig1557:13411..13743Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 13412..13743 +
1691683006.3634627-CDS-L-elsbetiae_contig1557:13411..137431691683006.3634627-CDS-L-elsbetiae_contig1557:13411..13743Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 13412..13743 +
1622815637.3466723-CDS-L-elsbetiae_contig1557:14422..145431622815637.3466723-CDS-L-elsbetiae_contig1557:14422..14543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 14423..14543 +
1691683006.375724-CDS-L-elsbetiae_contig1557:14422..145431691683006.375724-CDS-L-elsbetiae_contig1557:14422..14543Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 14423..14543 +
1622815637.3567576-CDS-L-elsbetiae_contig1557:14795..148721622815637.3567576-CDS-L-elsbetiae_contig1557:14795..14872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 14796..14872 +
1691683006.3878217-CDS-L-elsbetiae_contig1557:14795..148721691683006.3878217-CDS-L-elsbetiae_contig1557:14795..14872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 14796..14872 +
1622815637.366727-CDS-L-elsbetiae_contig1557:15156..153131622815637.366727-CDS-L-elsbetiae_contig1557:15156..15313Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 15157..15313 +
1691683006.3963668-CDS-L-elsbetiae_contig1557:15156..153131691683006.3963668-CDS-L-elsbetiae_contig1557:15156..15313Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 15157..15313 +
1622815637.37697-CDS-L-elsbetiae_contig1557:15639..158671622815637.37697-CDS-L-elsbetiae_contig1557:15639..15867Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 15640..15867 +
1691683006.4062781-CDS-L-elsbetiae_contig1557:15639..158671691683006.4062781-CDS-L-elsbetiae_contig1557:15639..15867Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 15640..15867 +
1622815637.386903-CDS-L-elsbetiae_contig1557:16494..165951622815637.386903-CDS-L-elsbetiae_contig1557:16494..16595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 16495..16595 +
1691683006.4141707-CDS-L-elsbetiae_contig1557:16494..165951691683006.4141707-CDS-L-elsbetiae_contig1557:16494..16595Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 16495..16595 +
1622815637.396593-CDS-L-elsbetiae_contig1557:17029..172281622815637.396593-CDS-L-elsbetiae_contig1557:17029..17228Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 17030..17228 +
1691683006.4224062-CDS-L-elsbetiae_contig1557:17029..172281691683006.4224062-CDS-L-elsbetiae_contig1557:17029..17228Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1557 17030..17228 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1557.3909.1

>prot_L-elsbetiae_contig1557.3909.1 ID=prot_L-elsbetiae_contig1557.3909.1|Name=mRNA_L-elsbetiae_contig1557.3909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=489bp
MGPGVWTAIEILLASYIRAGQAADAGQAVCLDEYRMLGCYADSDSNRILP
AGILSDSGVMSTQLCYQICDDGLNTHFGTQNSHECWCGVEPELSKNGPEL
HLSDCNMLCAGSTVGEVCGGFKAMTMFEMLTYQGCQDRTLDHRVTQAPPI
SGSDDEQIIGRPWDYQDKFDPTILFASTATSSSPSRGIAAEMCNVDDQHR
ELMALVQVWRGSTKTVPRVFCGIFTHRINHSTKVKAIKHTWASHCDGFVA
FSDVTDLELHTFKIKHEGPETYTNMWQKSRAIWKYINFHYKNDFDWFVLG
GDDLFVVVENLRKYLLSDEVTRAAGGREHGGTNPMYLGRRLRRFGQHHRI
YNNGGASYVLNQAAVGLLASHLDDDACHPHSRKSWEDILVARCLRKNGVV
PSDTRDYFGRERFHPFTPALHLGYDKTQALADSVAKLVSGIMKEAIDLKF
GRECCSRDSLSFHHVDEELMSRLYQLAYSCPEVSKGYA*
back to top

mRNA from alignment at L-elsbetiae_contig1557:6997..17405+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1557.3909.1 ID=mRNA_L-elsbetiae_contig1557.3909.1|Name=mRNA_L-elsbetiae_contig1557.3909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=10409bp|location=Sequence derived from alignment at L-elsbetiae_contig1557:6997..17405+ (Laminarionema elsbetiae ELsaHSoW15)
CTCTTTCGACGTCTGCATTCGCTAGTTGTGAACTGGGCTCTCTTCCTCTC
CAGCTGTGACACCGTAGCGCGGGGGGGGTCGTGATGGGTCCAGGAGTGTG
GACCGCCATTGAGATCCTCCTAGCTTCGTATATCCGTGCTGGACAGGCTG
CTGATGCTGGACAGGCTGGTGAGTGTTGTCCAAATAACCGCAAAGGAATG
ACCCGTATTCTGACATAGCCTTTCGTAGCAGAGACGTCACTCCAAGCACG
TGTCGAAAGGCATGCCTCAGGGTGTATGTGTGCTTGTTGTTGGGAGTATG
CAAGGCACGATCAGAGGCCAGATACATAGTTTGCAGAACTTCTCTAACTG
GGAGCGTGTATTGTAGCAGACCTCCTCTGGGTCTTGGATTTTTAGTTTCG
TAATCCCCGCTTCCCCTCGGGCGCCGCTTATGGCGGCGCGCTAGGAGACA
AAACAAGTAATCCTATTTTGGTCTATCCTCTTCTTCCGCCTCAAATCACT
CCACTCCCGAACACAACATATTGAACTATATGTATGTACAAGATCACCCT
TCGGAGCGAGCTCATGAGAGCACAGCGGCAGGGGGTGATGCAAGACGAAA
TAAAAAGGAGGAGCTCGAGTTTTGAACCCAGATCTTTGAACCAAAGATTT
TGAACTCAAACGCTTCTTTTCCCGCAAAAAACAGCTGGCCACGATCACGT
GGCTAAGGGGAAAAGGCCAAACCCCAGAAAAGACGAAGAGGCATGTTGTG
TTTTGTGGTCTGCACCCGGCCAAAGCTGACGTGGCTTCCAGGTGCTCGGC
AGAACTCACAAAAAACCGAGCGTTACTTGCGACGCAACTGTGTTTTTGGC
CTCTATTCGCTTTTGCACTAAGCGCCATCGCAATTTAAAATGCCGCGCGT
TCTCCTTGGCTAGTAGGTTAACATATTTATTTATCGAAAGCCAAGGACAA
CAGCTACCATCGCGTGGCCTTCGTTTCCCCAGCGGTGCTGTAGAGCCTTT
GCTGCCCTCCGTTCCTTTTATCAAACCTTATTCGACAGCTGTAGAGCTCT
CGACATGGCAAACGTCACAACCATTTCAAAACGGGGCTGCCACCGCTCGC
TGCTGAGAACGCCAGAGATTGCTCTAAGGTACTATTCGAGTACACCTGTG
TCTCGTCGTAGCCTCTGGTTGGGCGTACCTGTCATGGCACCGCCAGAGAT
TGCTCTAAGGTACTATTCGAGTACACCTGTGTCTCGTCGTAGCCTCTGGT
TGGGCGTACCTGTCATGGCACTCGCCGCCGTAGGCTGAGGTCGAAGTTAA
GCCGCATTTTTACAGCAGGCTAAAAATGCTGTTTCGTCACACCGCCACTC
GAAGCACAAGGATCTGTTTGAAACCTGCCCTCCGGCTATGGCACTCTTTT
GGGGTGCCCTTCCACATATATATCTCTTAACCTAGAGGCCAAGGAGATGG
CGCGCCATTTTTTGAAAATTATCGGGCATTTCGACAACTTGCTGTGTTTA
TAACCAAGATAAATTTTTTAATCCAGGTTGTACAGTAAAGCAGGGGGCGC
TACCGGGCCACTGATCGTGGCCTACCTTAAGGTAAACCACGATCACGTGG
CTAAGGGGAAAAGGCCAAACCCCAGAAAAGGCGAAGAGGCATGTTTTGTT
TTGTGGTCCGCACCCGCCAAAAGCTGACGTACTCAGCAGGTTGTCGGCCA
AACCCAATAAAATCTGCCGTTTCTTCGCGGCGCAACTATGTTTTTGGCCT
CTTTTCGCTTTTTTTACCCTGAGCGCCATCATCGCAGTTTAAAATGAAGC
ACATTCTCCTCGGCCAGTAGGTTAAGGCTGGCCGCGATCACGTGGCTAAG
GGGAAAAGGCCAAACCCCAGAAAAGGCGAAGAGGCATGTTGTGTTTTGTG
GTCCGCACCCGGCCAAAGCTGACGTGGTTTCCAGGTGCTCGGTCAAACAA
AGAAAAACGACGGTTACTTCGCGGCGCAACTAACTGTGTTTTTGGCCTCT
TTTCGCTTTTGCACTAAGCGCCATCGCAACTTAATATGAAGCACATTCTC
CTTGGCCTCTAGGTTAACATATCTATCGAAAGCCAAGGACAACAGCTACC
ATCGCGTGGCCTTCGTTTCTTCAGCGGTGCTGTAGAGCCTTTGCTGCCCT
CCGTTCCTTGTATCAAACCTTATTTGACCGCTGTAGAGCTCTCGACATGG
CAAACGTCACTGCCATTTCAAAACGGGGCTGCCACCGCTGCTGAGAACGC
CAGAGATTGCTCTAAGGTACTATTCGAGTACACCTGTGTCTCGTCGTAGC
CTCTGGTTGGGCGTACCTGTCATGGCGTCCGCCGCCATAGGCTGAGGTTG
GGGTTAGGCCGCATTTTTTAAAATAAAACAAAGAATCAAAGATGGAACCT
AACCCATACTAGAGCAAAGACTCGATATGGGGTTCTTAAAATGCTCTTTT
GTCACGCCGCCACTCGAAGCACAAGGGTCTGTTTGAAGCCTGCCCCCCGG
CTATGTTACTCTTTTGGGATGCCCTTCGACATATCTCTTGGCCTACTGGC
CAAAGAGATGGTGCCCCATTTTTTGAAAATCGTCGGGCATTTCGACAACT
TGCTGTGTTTATAATCAAGCTAATAAAATTAATCCAGATTGTAGGGTCTG
TACAGTTAAATTTTTCCACCACGTGACCCCCTTTTTCTCACTCAATTTTG
AGAGTTGGAACGTGAAATAAAGTGGGCATGAACCGCACGGACGAGAGGAA
TCCAAATCCGGTGTCAAAAAGAAAATCGGACAAAAATCGCCGTTTTCGAA
AATATTTACCCCGAAATTACCCCGAGACGGTACCAAGTTGGCCCGAAAGA
CGAAATAATTTCCCCGAACGACCTGCCAGCTGTTCCTCTGTTCTGGAAGC
CGCCACGCCTCGCTTTCTTGCTGCCGGGAGGGCGCCCAGCCTTTTCCCCA
GACATGTGTGGATTTTGGGTGCCTCGTGGTGTTTGTGTGCTGGTCTGGTG
GATGTGTGAGCACCAAAACTTTGAATGGCCATATCTCGCTCAAAAATGTT
TTTTTGGAAAAAGGAAAAGTTTCCCGCCTGGGCGCAGGTCCAATTCGTCC
GAATCCGTTGAGTTATTTGTGTTCTATCGGTTCAGCAATCTTTAAAAAAC
GGAACCATGACTCCCCTGAATACTGTTTTCTGCCCGTTATTCCGTCACAA
TCCAGTGAAAAAAAAACTGGGTTGGCTCGCGGTCAGCCCCATGGTGAAAG
CTGTTCAAAACCGGTGTAAAAAAAAATTGAGTTCACACTCGACCAAATAA
AACCGAACAAAATATTCAAAAATCTCCACGGAATCTTGATTATCTCGCCA
ACGAAAAAAAAAAAGCATCTGCTCCGATCAAACGATCCGTCTGAATCAGG
GCTTTCTCACGATATGTCGTATGTCACAAGGGGATACGTCAGTCACTCAA
AAAAAATCCCGGAGTGATTCGGCAGTGGCTGGAAAAAAATAACTGCTTGG
ACTATACAGCAAAGCAGGGGACGCTACCGGCCCACTCGTCGTGGCCTACC
TTAAGGGTGGACCACGCAGCACAGCTTTGAAATCCCGGGTAGAGATTCCA
GGAAAGAGCCCGAAGCGACACTTGTTTTTTTTATAGCGTTTTTTTTTTAC
CATCTCCCACAGAAACTGCCGTAGATCTCTCTCCAGCTGCTCTATCTCAC
CTCAAAATCGATTTGCGCTTGGACATGAGAACTGATACCAAGCCTCCTCA
GTCAACCCTTGGAGTTGACTATCTTGAGGTAGCTCTTACTGTTGGCAGCA
GAGCAGAGAGCAATATGTACGGCGGTCGACCGTTTGAATCCTAGTCTGCA
CCGAGCAAACTACATTTTTGTGTGTCCGCAAAACGAGGGCATGCACGCTT
GGGGTAGGTAGACAGCAGCGAGAGTCGGCCATGATACGCTCGAGATCTTT
CGAGATACGGTCTTCAGCTGAGCAACCCTTATAAGAACCTTGGAGGAACA
TAGTCGGAGCACAGCAGGAGCGGTGCTCAATAGCTTTCGATCTGGAGAAC
TTTGCGTTTTCAAACCGTCTCAAAACGTCCAATTTTCTGCTAACCTGGTC
GGGTTTTGCTGAACGAATAAAGGCACACACGCCTTGCGAACCAGCTCAAA
CAGCAGACACGCGAAGATAGCCAGGATGTTACGCTTCAAGAAAATGGGGC
TCAAGACAGTCAAACCGGATTCCGACCCCCATCAATTAATTTTTTTTCTT
TTTTTTAGGTAGATTTTTTTGTGCCAAACACGTGTTCTTATTGTACTGAT
TTCAAAGAGGAAGGAATCAAAACCAGCAATATATTCCCCACAACTTCAAT
TACGTGGTCCACCCTTAACGACCGTTGAAAATACAAGTTGCGTTTCAGCC
CATCCCTGGGGCTGCAGTGTGGATCATGAATACCCCAGTTGGTACCGCTT
CCGGTTTACCCGAAGGGGAGACCTTTTTGTGGACCGCACTTGTCTTGTCG
TCCTGCTTTACTGCGAATCCGGAGGCGTCCTCGATATATCCGACGTTGAC
TTGATTTCGATTTCCGAGGGCAAACATAGAAATCAGTCAATCAAAAATAG
AACCTAACGCACATCAGAGACGGGACCCCGTGGGATTCAACCGATATTCT
ACCAGGTATATAGTTACGTTATACTGGTCTGGTTGAGTAGAAATACACCT
AAAACATCAGAAGAGTTCAGAATCTCCCCTGCAAATCCTAAGTCCACCAA
CATGTATTCCGAGGACTAAGTGCTGGATAAGACACATCATATCCACTAGA
CCAAAACTGGTGCGCTCTTTGGATCTTCAAACCCAACTTCGATTTCGATT
TTCCATCGCGATTCTCCAAAAGGACCCGCCCTTAGTGTCAGCATCCCCAG
AAAATAAGACCCCGCGTTCATGCAAGTGGCAGTCCTACCTGTTGCAGGCT
GTCGTTCTAGCACACCTGTTGTAGACTGCCGACATATCACACCGATTTTT
CCGTTCGGTTCCGTTTTCAAGTCTGCCTAGATGAGTATCGGATGCTTGGC
TGCTACGCTGACTCGGACAGCAACCGAATATTGCCTGCGGGCATTTTATC
CGATTCTGGAGTTATGTCTACACAGGTGGGGCAGATAATGGCGATCAAGC
ATTTTTTTTTTCTTTCGGATACGATACGTTTGTTTACTAGCACTCGGGCG
AGGGTCCGAGCAAATTTAGAAGCAGCGCACCATTTTGGTCGCTGCGTAGG
AACCGCAGAAGCAATTTTTGAGGTGGGTTATGAGATGGGGACGGAGGGGA
TAGTCCTCTGTGCGAGAATGCTCTCTCTTGGTCGCGTGTATGTGCTGCGT
TTCGTTCTTGCATGCATAATAGACTGTATGGTACATTGTGGCCCCTTATT
GCTTTACTCTCGTGCACTTCCCACGTGTTCAAAAGCATACTGGCTAGGTA
AATTGCTCCGTTTCTGATGTTTGATGGACACCGCCACTTATCTGATATTG
ATCGTTTGTTTCTTCCTAACCTTCAACACATTCAACTCGAACGATGATGC
ACGCTCAGTTGTGCTATCAGATCTGCGACGACGGGTTAAACACGCACTTC
GGCACGCAGAATTCTCACGAGGTGCGAGCTTAATGGGTGTCCATGCCTTA
CAATCATATCTTGCCTTTGAATGCACAAATGGAAAACATGTGTAGTGTGC
TTTATCACGCACAAGAGCTGCCCGCCAAGTGACGCATGTTCATTGCTCAT
ACAGGCACACTTGTATCTTGTTTGATGCGCTGAAAAACAAGACTTTTCTT
ATTCGTTTCGTCGGCCCTGTGGGCTGACGAAACATTTGTCGTCCTACACC
ATGACTTGAATCGCATTTATGTGCGTGTTTAATTTTTATTCTCGCTGTAT
TATGAGCCTCCCATGCGACGAAGGTCGAGGTTGTGCAGTGTTTTCGTGTA
AACCGCACCCCCTTAAGTGGGCGGATCAGCGACCAGATCTCTAGCTTGGA
ACATGATCCCACCGCACAAGATGGTTGCCGTTCAATTAGTCAACTGATTG
TTTCTTTCTTCGGTTGTGGTTTACTTACACATGAGCTTGAACATGCCTGT
CCAAATATGTTAGCTTTCTTGTTATACTTGTAGTCACGGAGAAGCACAGT
TTATCACCGCGTGGGGTGCACGATTGCGCCAGTTTCGTTGACTTGGCCTT
GTTCGTGTTTGATCAATTTGCGCGTTCCTTATTTTTTTTGGAAATGTGTA
TTGTACCCGCTAATCCCTGACGAGCGCCCTCTTCTGAAAGGATTGTAACG
ACTTTAGAATCCAGGCAATACTTTGGGTAGGAATGATACAACACTGGGCG
ACCGAGAGCATATTTGTATGAAAGACGTTCGGACCTGTCATCTCGGTTCC
CCACACGTTCAACAGTGCTGGTGCGGCGTGGAGCCCGAGCTGAGCAAGAA
TGGCCCAGAGCTACACCTCAGCGACTGCAACATGCTGTGCGCCGGCTCGA
CCGTTGGTGAGGTCTGTGGAGGTTTTAAGGCAATGACGATGTTCGAGATG
TTGACTTATCAGGGCTGCCAGGACCGAACTCTCGACCACCGGGTTACACA
AGCACCCCCAATTTCTGGCTCAGACGATGAGCAGATAATTGGCCGCCCTT
GGGACTACCAGGACAAGTTTGACCCTACCATCTTGTTCGCGTCGACTGCA
ACTTCCTCTTCGCCGTCGAGAGGAATTGCCGCTGAGATGTGTAACGTGTG
AGTGACAAAAAAGTAGGACAATTTTGATTTCCACGTATGTAGAAGAGGCC
AATGTAGACAACAAGGACACCCAACCACAGCGGTTGGTACTAGAGCGTGG
GTTCTGGGGTAGCAAAAAGCGCAGCTTTTGATGATTGTACCACGTTCATG
TCGTATCGGATATACGAATGGTTGCGCACCCTTTTCGAAATGAACACCAC
GACTCCACCATTCAGTATTTAATTTACACGAAGAGAACAGGATATCTATT
TGGAGGCATTCCGCTGAGCGATGCTGCACGTACGCATTTCGCCCGGTGTG
TGCGAACTCTCCCCTTCCTAAGTTTGATACTGGACTAGAGATTTCAATGG
ATGTCATATATTTACGGCACCCTGACTGATATTCCTGTGGACTTCACTCG
CGCAGCATAACGACGTTGCAGAGTACACGTTGTGCTACTCCTAGATACAA
CTCTTGAACAGCTTGAAATATTTGTCTTGCGGCCAACACGCGGATCCGGT
GCCGAAGGCGTTAAACGCAACCCAGACGTCCATGGCCCTCGCCAATGATG
TAAAACATCTTGTCACACCAACGAGGGCTTCCGACGTGTTCGCAGCCACA
CCAGTTTTGTAATGCACTGCCTTTACTGTTGGCCCTCTTCTTGCAATGTG
CGACCGGCGACCGTCGTTTGTCGCAGGGATGATCAGCATAGGGAACTGAT
GGCGCTTGTTCAAGTTTGGCGAGGTTCTACAAAGACCGTTCCGAGGGTGT
TTTGCGGAATTTTCACGCATCGAATCAACCACTCAACCAAAGTTAAGGTG
ATACAGCAACGATTGAGAGCAAAACCTCGCTCGTCGATATTTCAATGATT
ATGCGCCAACAACAACAGACTCCGGTGTCGTACTCTCTTTCTTGACTCAT
ACCTATGGTACGTTATATTATGCTCTTGGTGTCATGCAGATGTATGCACG
CTTGAGCTATAGAGACAAGAGGAGGGGGAATGCTGCAGAGGCATTCTGGA
TGCGATCATTGCGTGTTGTTGTGCACTCTTTGTTGCATGTGAAAAGCAGG
CTATCAAGCATACCTGGGCGTCCCACTGTGACGGATTCGTGGCCTTCAGT
GACGTTACTGACCTTGAACTCCACACGTAAGGATCAAACAAGGCATATAC
GTTTGTCCGTTTATGTGTGGTTTGTGTACTCCAAGCCCGACGTTGTTGAT
GCATATGTTGAGAATACTTTTTCACTTTTCCGTTCGATAGGTGTTCCATC
ACCTTTCCGAAGTGATGCTAGAAAATATGTTGTAAGGTGTTGAAGTAGAC
TGAGGCACGTCCTGTGCTCGACCGATATTGCACACGTTATAGAAATAGGT
TTGCACGATGCCGGAATGGCGCACCTGACAGATATACGCGTTACCCGTCG
CACTCGACAGGTTCAAAATCAAGCACGAGGGACCAGAAACGTATACAAAC
ATGTGGCAGAAGAGCAGGGCGATCTGGAAGTATATCAACTTCCACTACAA
AAACGACTTTGACTGGTTCGTTCTTGGGGGTGACGACCTCTTTGTAGTTG
TGGAGAATCTGCGTAAGGTAAGTCGGGCCGGTATAGTACGAAGCGGCACC
GATTTCGTTCCTGTTCGATCGAATCCTCCGCCTCGGAGTCCGTCGTTGAT
TTCGGAGCACATCGCAACATGATGGATTATTGGCACACCGACGGCCGATT
TGGTGTTGTTTTTTTCCTGGGCCTGGCATATTTTCTTCTCGCCACCCGTA
GGGGCGACTTTTAAGGCCTATGGTGAAGATGGTAGGTACAGCCTTTCCCG
TGCAACGAACCAGTAAAACTGAGAGGTGCTCCTTCATCGGCACCCCCACG
TTGACTACGTGTCACATTTCCACACCTGGCCGACCGACGACAGTACCTGC
TATCCGACGAGGTCACGCGGGCCGCTGGAGGACGAGAGCACGGGGGCACG
AACCCCATGTACCTGGGAAGGCGCTTGCGACGTTTCGGCCAGCACCATAG
GATATACAATAACGGAGGGGCGTCGTATGTGCTGAACCAGGCGGCGGTGG
GGTTGTTGGCGAGCCACCTGGACGATGATGCCTGCCATCCTCACAGTCGA
AAATCCTGGGAAGATATTCTGGTAGGGGATCTGAATTGATTAGTGTGCCC
CTTGGGCGTTTTCATATTTCGCTTGTTGTGTACGGAAACTATAAAAAAGA
GAAAACCCACACTTTGCCGAACCAGCACCTTGTACATAACCTTGATAAGA
AATCTGTGAACCAACTTTTTATTTTAAAGATCCTTGCGTAGCTTTAAATA
ACCGTTGGTTTTTGTAAAAAGGTGGATAGCCGAGGGTACCGTATGTAGAT
ATAGCAATATCTTTAATTATTTTGGGGGGGTTACTGGGACTTTTCGTTGA
GGGGGACTCTCAATAGGGTGGTACACCAAGATGCAGACACCAGACGGGGC
GATGGAAGACACACGGGAGAGCGGGAGCAGGCACTGGGCACTATCAAGCC
TCATGCATCGGGAGTAGAAATCGTCCCACCTGCTTCTTGCCATGAGTCCC
AGCCGAGTACATGAGTATGGAAGGGTCGTCAGCTATTGGTTGTCGCAAAG
TGCCGGTGGTGGCAGCCATGGGGCCCATGCTTTTGATGAGAGTGCGCCCC
ATTTTCATCTTGATGCGAAGCCTCCGATGGCAAATTAATTCTGCATCTCA
GTTGACCGGGCCCCAAACCGATTTTGCCTTGTCGTTGTTTGGCCAAAGGT
TGCTCGGTGCTTGAGGAAGAACGGGGTGGTACCGTCCGACACGCGGGATT
ATTTTGGGCGTGAGCGGTTCCATCCTTTCACGCCAGCGCTTCACCTTGGG
TGAGTGTGGGCTATGCTGTGGTTGTCCATTTCGTTTGCATATCTCTCAGG
AATAGGGGCGAAACGATATGCGCCGATGCATCGCCCCCCCCATTTTGCAT
GTTGTTTAGGGAATTAGGCTTTTCGGCTACCGTGGCAACACAAATGGCTT
AGGAATACTTGGCCACGGTTAGACATGCGAATCTCACCGTCTCATTGAAG
CACGACAGAAACGCATGGTGAATGCCTGCCGATGTGTGTGTAGCGAGCGT
TTGTCTTGGCCCGGAACGGCTCAGCGGTGTGAAGTCAGTGTAGTTCAACC
TACGTCATCAGCCGCTGGGTGAGAAAGAGTCTGCATGTGCGTTCGGATGG
TTCTCGAAAGGCAACCCGGTAACGTCTACCTTTTGATTTTTATCTGGCTG
GTTACACTCCTACCAAACGCGTCGTGGTGGCAGGTACGACAAGACCCAAG
CGCTGGCGGACAGCGTTGCGAAACTTGTATCAGGAATCATGAAAGAGGCG
ATCGATCTGAAGTTCGGCCGCGAGTGCTGCTCTCGCGACTCCCTCAGTTT
TCACCACGTGGACGAGGAGCTCATGAGCCGGCTTTACCAACTAGCATATT
CTTGCCCTGAAGTATCGAAGGGCTACGCTTGACTAGGAAATTGACGTATG
AGTGCTGCAACATGTACCCCTTGCGAATGCTGCGTACATGCATGTGTCGT
TTCCTTGTCGCGCTCGATGGGTTGAGTACGCCTCGCAAATCTTGACTGAA
TGATATTACTTTCGGACTGAAATTTGGTTTCAATATGGTTGTCCGCCCGG
AGTTAATCC
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1557:6997..17405+

>mRNA_L-elsbetiae_contig1557.3909.1 ID=mRNA_L-elsbetiae_contig1557.3909.1|Name=mRNA_L-elsbetiae_contig1557.3909.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2934bp|location=Sequence derived from alignment at L-elsbetiae_contig1557:6997..17405+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGGTCCAGGAGTGTGGACCGCCATTGAGATCCTCCTAGCTTCGTATAT
CCGTGCTGGACAGGCTGCTGATGCTGGACAGGCTGATGGGTCCAGGAGTG
TGGACCGCCATTGAGATCCTCCTAGCTTCGTATATCCGTGCTGGACAGGC
TGCTGATGCTGGACAGGCTGTCTGCCTAGATGAGTATCGGATGCTTGGCT
GCTACGCTGACTCGGACAGCAACCGAATATTGCCTGCGGGCATTTTATCC
GATTCTGGAGTTATGTCTACACAGTCTGCCTAGATGAGTATCGGATGCTT
GGCTGCTACGCTGACTCGGACAGCAACCGAATATTGCCTGCGGGCATTTT
ATCCGATTCTGGAGTTATGTCTACACAGTTGTGCTATCAGATCTGCGACG
ACGGGTTAAACACGCACTTCGGCACGCAGAATTCTCACGAGTTGTGCTAT
CAGATCTGCGACGACGGGTTAAACACGCACTTCGGCACGCAGAATTCTCA
CGAGTGCTGGTGCGGCGTGGAGCCCGAGCTGAGCAAGAATGGCCCAGAGC
TACACCTCAGCGACTGCAACATGCTGTGCGCCGGCTCGACCGTTGGTGAG
GTCTGTGGAGGTTTTAAGGCAATGACGATGTTCGAGATGTTGACTTATCA
GGGCTGCCAGGACCGAACTCTCGACCACCGGGTTACACAAGCACCCCCAA
TTTCTGGCTCAGACGATGAGCAGATAATTGGCCGCCCTTGGGACTACCAG
GACAAGTTTGACCCTACCATCTTGTTCGCGTCGACTGCAACTTCCTCTTC
GCCGTCGAGAGGAATTGCCGCTGAGATGTGTAACGTTGCTGGTGCGGCGT
GGAGCCCGAGCTGAGCAAGAATGGCCCAGAGCTACACCTCAGCGACTGCA
ACATGCTGTGCGCCGGCTCGACCGTTGGTGAGGTCTGTGGAGGTTTTAAG
GCAATGACGATGTTCGAGATGTTGACTTATCAGGGCTGCCAGGACCGAAC
TCTCGACCACCGGGTTACACAAGCACCCCCAATTTCTGGCTCAGACGATG
AGCAGATAATTGGCCGCCCTTGGGACTACCAGGACAAGTTTGACCCTACC
ATCTTGTTCGCGTCGACTGCAACTTCCTCTTCGCCGTCGAGAGGAATTGC
CGCTGAGATGTGTAACGTGGATGATCAGCATAGGGAACTGATGGCGCTTG
TTCAAGTTTGGCGAGGTTCTACAAAGACCGTTCCGAGGGTGTTTTGCGGA
ATTTTCACGCATCGAATCAACCACTCAACCAAAGTTAAGGGATGATCAGC
ATAGGGAACTGATGGCGCTTGTTCAAGTTTGGCGAGGTTCTACAAAGACC
GTTCCGAGGGTGTTTTGCGGAATTTTCACGCATCGAATCAACCACTCAAC
CAAAGTTAAGGCTATCAAGCATACCTGGGCGTCCCACTGTGACGGATTCG
TGGCCTTCAGTGACGTTACTGACCTTGAACTCCACACGCTATCAAGCATA
CCTGGGCGTCCCACTGTGACGGATTCGTGGCCTTCAGTGACGTTACTGAC
CTTGAACTCCACACGTTCAAAATCAAGCACGAGGGACCAGAAACGTATAC
AAACATGTGGCAGAAGAGCAGGGCGATCTGGAAGTATATCAACTTCCACT
ACAAAAACGACTTTGACTGGTTCGTTCTTGGGGGTGACGACCTCTTTGTA
GTTGTGGAGAATCTGCGTAAGGTTCAAAATCAAGCACGAGGGACCAGAAA
CGTATACAAACATGTGGCAGAAGAGCAGGGCGATCTGGAAGTATATCAAC
TTCCACTACAAAAACGACTTTGACTGGTTCGTTCTTGGGGGTGACGACCT
CTTTGTAGTTGTGGAGAATCTGCGTAAGTACCTGCTATCCGACGAGGTCA
CGCGGGCCGCTGGAGGACGAGAGCACGGGGGCACGAACCCCATGTACCTG
GGAAGGCGCTTGCGACGTTTCGGCCAGCACCATAGGATATACAATAACGG
AGGGGCGTCGTATGTGCTGAACCAGGCGGCGGTGGGGTTGTTGGCGAGCC
ACCTGGACGATGATGCCTGCCATCCTCACAGTCGAAAATCCTGGGAAGAT
ATTCTGTACCTGCTATCCGACGAGGTCACGCGGGCCGCTGGAGGACGAGA
GCACGGGGGCACGAACCCCATGTACCTGGGAAGGCGCTTGCGACGTTTCG
GCCAGCACCATAGGATATACAATAACGGAGGGGCGTCGTATGTGCTGAAC
CAGGCGGCGGTGGGGTTGTTGGCGAGCCACCTGGACGATGATGCCTGCCA
TCCTCACAGTCGAAAATCCTGGGAAGATATTCTGGTTGCTCGGTGCTTGA
GGAAGAACGGGGTGGTACCGTCCGACACGCGGGATTATTTTGGGCGTGAG
CGGTTCCATCCTTTCACGCCAGCGCTTCACCTTGGGTTGCTCGGTGCTTG
AGGAAGAACGGGGTGGTACCGTCCGACACGCGGGATTATTTTGGGCGTGA
GCGGTTCCATCCTTTCACGCCAGCGCTTCACCTTGGGTACGACAAGACCC
AAGCGCTGGCGGACAGCGTTGCGAAACTTGTATCAGGAATCATGAAAGAG
GCGATCGATCTGAAGTTCGGCCGCGAGTGCTGCTCTCGCGACTCCCTCAG
TTTTCACCACGTGGACGAGGAGCTCATGAGCCGGCTTTACCAACTAGCAT
ATTCTTGCCCTGAAGTATCGAAGGGCTACGCTTGAGTACGACAAGACCCA
AGCGCTGGCGGACAGCGTTGCGAAACTTGTATCAGGAATCATGAAAGAGG
CGATCGATCTGAAGTTCGGCCGCGAGTGCTGCTCTCGCGACTCCCTCAGT
TTTCACCACGTGGACGAGGAGCTCATGAGCCGGCTTTACCAACTAGCATA
TTCTTGCCCTGAAGTATCGAAGGGCTACGCTTGA
back to top