mRNA_L-elsbetiae_contig15561.3902.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: A0A6H5KYW5_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW5_9PHAE) HSP 1 Score: 226 bits (576), Expect = 5.950e-71 Identity = 152/203 (74.88%), Postives = 165/203 (81.28%), Query Frame = 1 Query: 1 QEDFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKAEMGQPQPSAADVEAQQQMQLLAMQHALGQQ------QMVSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMAAQAALQQQALMQADPQLAMQ--VLWQQHAQ 585 +EDFK HELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIF+LEMAMRA SLTAENKRRTLQRNDIAMAV+KTDTYDFLIDIVPR+ELKK ++G +A D +AQ QM L+AMQH+LGQ Q XXXXXXXXXXXXXXXX +A+AAQAALQQQALMQADPQ+AMQ VLWQQ AQ Sbjct: 45 KEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFILEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHA--TAIDQDAQLQMHLMAMQHSLGQHMQNTLLQXXXXXXXXXXXXXXXXXXXXXSAEGNGAAGATPEALAAQAALQQQALMQADPQMAMQLQVLWQQQAQ 245
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: D8LGF1_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF1_ECTSI) HSP 1 Score: 207 bits (527), Expect = 2.860e-65 Identity = 111/128 (86.72%), Postives = 118/128 (92.19%), Query Frame = 1 Query: 1 QEDFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKAEMGQPQPSAADVEAQQQMQLLAMQHALGQ 384 +EDFK HELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRA SLTAENKRRTLQRNDIAMAV+KTDTYDFLIDIVPR+ELKK ++G +A D EAQQQM L+AMQHALGQ Sbjct: 45 KEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHA--AAVDQEAQQQMHLMAMQHALGQ 170
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: M4BYU7_HYAAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYU7_HYAAE) HSP 1 Score: 139 bits (349), Expect = 4.040e-37 Identity = 73/128 (57.03%), Postives = 93/128 (72.66%), Query Frame = 1 Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKAEMGQPQPSAADVEAQQQMQLLAMQHALGQQQ 390 DFKTH+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+++RA T ENKRRTLQRNDIAMA+ KTD +DFLIDIVPRD++K A+ G P A + QQ Q +Q L QQ Sbjct: 66 DFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIKPAKKGPVDPQAVYQQQLQQQQAAMLQQLLQTQQ 186
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: A0A7S1TX78_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX78_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.550e-35 Identity = 75/122 (61.48%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 1 QEDFKTHELPLARIKKIMRLEDDIAE--AGAP--RFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKAE--MGQPQPSAADVEAQQQ 348 QEDFK+H LPLARIKKIM+ E++I AP RFMI+AEAPI+ AKACEIF+ E+ R+ T ENKRRTLQRNDI++AV+KTDT+DFLIDIVPR+E+K E + +P +A+ + AQQQ Sbjct: 14 QEDFKSHALPLARIKKIMKSEEEILNDAPNAPNSRFMISAEAPIMFAKACEIFIAELTTRSWGHTEENKRRTLQRNDISVAVSKTDTFDFLIDIVPREEIKAGEEPVQRPINAASPLGAQQQ 135
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: A0A3F2RPL4_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPL4_9STRA) HSP 1 Score: 130 bits (327), Expect = 3.330e-35 Identity = 64/101 (63.37%), Postives = 82/101 (81.19%), Query Frame = 1 Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKAEMGQ 309 DFKTH+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+++RA T ENKRRTLQRNDIAMA+ KTD +DFLIDIVPRD++K A+ Q Sbjct: 54 DFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIKPAKKNQ 147
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: K3WKP4_GLOUD (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKP4_GLOUD) HSP 1 Score: 132 bits (332), Expect = 5.920e-35 Identity = 65/104 (62.50%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKAEMGQPQP 318 DFKTH+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+++RA T ENKRRTLQRNDIAMA+ KTD +DFLIDIVPRD++K A+ G P Sbjct: 50 DFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIKPAKKGPTDP 146
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: A0A484DSZ0_BRELC (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSZ0_BRELC) HSP 1 Score: 132 bits (333), Expect = 6.800e-35 Identity = 69/116 (59.48%), Postives = 88/116 (75.86%), Query Frame = 1 Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKAEMGQPQPSAADVEAQQQMQ 354 DFKTH+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+++RA T ENKRRTLQRNDIAMA+ KTD +DFLIDIVPRD++K A+ G P QQQ+Q Sbjct: 54 DFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIKPAKKGPVDPQTV---YQQQLQ 159
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: A0A3M6VFP5_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFP5_9STRA) HSP 1 Score: 132 bits (333), Expect = 7.510e-35 Identity = 65/104 (62.50%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKAEMGQPQP 318 DFKTH+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+++RA T ENKRRTLQRNDIAMA+ KTD +DFLIDIVPRD++K A+ G P Sbjct: 58 DFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIKPAKKGSADP 154
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: A0A2D4BX92_PYTIN (Nuclear transcription factor Y subunit C-4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX92_PYTIN) HSP 1 Score: 131 bits (329), Expect = 1.540e-34 Identity = 69/116 (59.48%), Postives = 90/116 (77.59%), Query Frame = 1 Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKAEMGQPQPSAADVEAQQQMQ 354 DFKTH+LPLARIKKIM+ +DD+ MI+AEAP++ AKACE+F+LE+++RA T ENKRRTLQR+DIA A++K+D +DFLIDIVPRD++K A+ G P A V QQQ+Q Sbjct: 51 DFKTHQLPLARIKKIMKTDDDVR-------MISAEAPVLFAKACEMFILELSLRAXYHTEENKRRTLQRSDIATAISKSDVFDFLIDIVPRDDVKSAKKG---PVDAQVIYQQQLQ 156
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Match: A0A662XQJ6_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQJ6_9STRA) HSP 1 Score: 129 bits (323), Expect = 1.640e-34 Identity = 63/97 (64.95%), Postives = 80/97 (82.47%), Query Frame = 1 Query: 7 DFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRACSLTAENKRRTLQRNDIAMAVAKTDTYDFLIDIVPRDELKKA 297 DFKTH+LPLARIKKIM+ ++D+ MI+AEAP++ AKACE+F+LE+++RA T ENKRRTLQRNDIAMA+ KTD +DFLIDIVPRD++K A Sbjct: 52 DFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIKPA 141 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig15561.3902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig15561.3902.1 >prot_L-elsbetiae_contig15561.3902.1 ID=prot_L-elsbetiae_contig15561.3902.1|Name=mRNA_L-elsbetiae_contig15561.3902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp QEDFKTHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVback to top mRNA from alignment at L-elsbetiae_contig15561:1076..4001+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig15561.3902.1 ID=mRNA_L-elsbetiae_contig15561.3902.1|Name=mRNA_L-elsbetiae_contig15561.3902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2926bp|location=Sequence derived from alignment at L-elsbetiae_contig15561:1076..4001+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig15561:1076..4001+ >mRNA_L-elsbetiae_contig15561.3902.1 ID=mRNA_L-elsbetiae_contig15561.3902.1|Name=mRNA_L-elsbetiae_contig15561.3902.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig15561:1076..4001+ (Laminarionema elsbetiae ELsaHSoW15)back to top |