mRNA_L-elsbetiae_contig1556.3900.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1556.3900.1 vs. uniprot
Match: A0A6H5JSG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG1_9PHAE) HSP 1 Score: 1789 bits (4633), Expect = 0.000e+0 Identity = 1140/2163 (52.70%), Postives = 1307/2163 (60.43%), Query Frame = 1 Query: 4 QLPVRILDTNQSKWKHGSEPFHFPPNVTRFRLEFVCFVGDKTSENLDVDISAILFDAKGSYVETVGYGCPSSTDGGIVHRHDSVQPEAGKIAEDIDFDLSVAHKRIFSACLLATTYGNHTFASLRSIQLRILAPSHLLSDSLEREIARVVYTREGCFGGRNQIENSLLCRRSNVPNVLVLGDIRRLLSRTAAVGGEAGGCPR----EAGAWNLRAPNVIASHIDVPHE----AIPLVQCYLRQWIPSIEVIGQELLIRRVYDIVSFLPLADLEAMRSHWVDGGTSGVAKNVFLEQMLRVLLRAHAALRDERQRLELTSLLSDLFDQISGSKSGVAAASAGFGPGNDTLAWEQFTTFWVEAATINTHSQ------------------------------------------------AVRCWADETLQWEMDSCFELAVRKPTKLISLPLMHLVVGLEERGGFVSVLNGVTGRLHTTLCPSSLQTVTTGGLNPHDSFLTVLDVECVDAKGIIIISSTDHAISVWMYNHGNESAMWRCSLHSRSAQILIRWVAHERGFLVSAGVDHVVTAWCVDKQLRLAVMQGHRARVTGVTYIPQHGQFATCSFDKTVRLWDADKFTPVAEMKRRSPVKFVESRGDLVLCITLEVEAHVLSVSTRQLWCRLIGHNHLIVGAAMVHFVDTRQGRQTRTITGDQMGEFFIWDIGNGQAKNGCAEVMQTFSVYTWRPNLGEIAGFERFHRHISAVNGGNKANSKQYGDRSQEKSDNSMSHVWPDILVRGVGGTIVVRTRQLVKDARAANVLVYNDKSMDLIASTGQHLRFWNLQTSDPLRMIASPGPLDITAMATDKPDPRRIYLGTTDGGIAVVHIVTGQLLFEAKHVHNGAVVLLVVCSTSREIVSVGIDRRVVVHREKPSGLGLVLAGSIEETHKGTISACAVSQEAQLIATAAGGEIRLWHKQ----------------------DLSFQGGISDLDADVLGLVFLPSTACLLASDSGGDVVLWVAEFDKAGAAGTGGDARK-HKTAASE-------------RFASASAPMD---EAGVDTQQDADARGGRSAPAWEADAEFTAA-----GTDANREDCV---------DGGGGGGLGRSVHRNAGGVEKTGLDRSAAFDQPSAEHTFKSTVEAWASAPLLQFRAQEPLTPP--AAAATPRHAGPCTLRPAVLLSSRRVHE-HTKRQEGKDQSQXXXXXXXXXQHSSPVYEIHLHSMYEDYAPSATPPLQ--SNGPGGGPN-GARGDKSSTEGGEGTARQPEDRLPGWPPLKYAGGGQNSYRAERRTKLVVITGSAGGWVEVWEAAGFLAAAGVDEDAMAARLLRRQPPER-GSHIRATRHARSGLTCFPPSALSAPAGGSAYTTVKSILEGLDPIPPSLRWEAHRGSPVSTLCALEKTPLLATASTDSTVRLFTLADIQ--------EKGGSATELSRG------------------------------------------HLSADLGASITPIPRGPPGAFT------------------AGHG-------APDDR-------PVRAG--TQP-AVAEDESSCADGHGAMDGSAAQPL---NA--IGARGNKHAKFGDVSPGPKKEEGETVTGGEASRIEVESEAYRGPGRLWEGGRAPSDSFDKQRVTLTSARAAKNHLGKVLYGNMYNEIKSGAACNTLVAEYVLRKNARGDAEVDTKESPFLRDNLRDKLPSRAERXXXXXXXXXX------------STPPATGMRPSMPP-----TGRGAAVAAHGAAATADHAPELPNKAGGVGQGNLAEQRFDPD-----CESASHDGGGKGRPRQARGXXXXXXXXXGRHCGHLDQSERQEKRLPRRPNYKEPVDSGLAESGGRSGERHHPSKSQSRXXXXXXAGGTENKHDTDVTDSRTGRRGGRRRQGEPGSRPLNGESGLVFSGSSIGGSGRRRAGEVTENSLHGDEMGGRRRQQIVTSASLKTLSLREMDGREDDSRGREKLGDALDSFLYLKLERGDALRAEERTLTKCASLPSAGLQERWKQMLERFDSAISPSPLDG-------PPTTTNWSKVKSQTKSTVGAYIRRKPQQSFGSLASGLEETDEALLSVANFGTYSRSEVETLGGVFLAFAR 5787 QLPVRILDTNQSKW+HG +PFHFPP+VTRFRL GSYVETVGYGCP STDG IVH+HDSVQPEAGKI+ED+DFDLS+ HKRI+SACL+ATTYG +TF++LRSIQLRILAPSHLLSDSLEREIARVV++REGCFG R + +SL R+S++PNV+VLGDIRRLLS+ AAVGG+ GG P E GAWNLRAPNV+ASH+D P E IPLVQCYLR WIPSIEVIGQELLIRRVYDIVSFLP+ DLEAM++ WV GT GV K +FL MLRVLLRAH LRDERQRLELTSLLSDLFDQIS +K A A G G D L WEQFTTFWVEAATINTHSQ AVRCWADETLQWEMDS FELAVRKPTKLISLPLMHLVVGLEERG +VS+LNG TGRLH TLCPS+LQTVTTGGLNPH+SFLTVLDVEC+D KGI++ISSTDHAISVW YNHG+E+A+WRCSLHSRSAQILI WV HERGFLVSAGVDH VTAWCVDKQLRLAVMQGHRARVTGVTYIPQHGQFATC+FDKTVRLWDAD F VAE+K RSPVKFV++RGDLVLCITLE+EAHVLSVSTR+ WCRLIGHNHLIVG +MVHFVD RQGRQTR ITGD GEFFIWDIGN +AKNGCAEVMQTF VYTWRPNLGEI GFER+HRH+ A G NK E+ + S + P V DKSMD+IASTGQHLRFWNLQTS+PLRMIASP P ITAM TDKPDP++IYLGT+DGGIAVVHIVTGQLLFEAK+ HNGAVVL+VVCS SRE+VSVG+DRRV VHREK +GLGLV AG IEE HK ISACA+SQ+AQLIATAAGGEIRLWHKQ DLSFQGGISDLDADVLGLVFLP TACLLASDSGGDVVLWV EF KA G+AR +KTA S R A A+ P D A D++ + G RSAPAWEAD EF G AN + DG G G+ + NA + + + + P E + K T AS P + PP + A R G CTLRP +LLS RRV++ H + + +Q Q SPVYE+HLHSMY+D P+ +P Q ++G G P+ R D + T G+G + G + RAERRTK V++TGSAGGW+EVWEA G LA AGVDE+AMAA+L RRQP ER G HI+ATR RSGLTC PSA S GGS KS LE L P+PPSLRWEAHRGSPVSTLCAL+KTPL+ TASTDST+RLF+LAD+Q S TEL+ G H +A +T + P G HG APDDR PV A TQP AV E+ G G M+ Q L NA +G R A+ G + P + E G VE A RG LW+ G++P DSFDKQR+TLTSARAAKNHLGKVLYGNMY+EIKSGAACNTLV EYV RKN RGDA +DT+ SPFL++NL +LPS AER XXXXX ++ +TG R ++ TG G G +A+ D A E+ G+G + PD ++ G PR G R G + KR+ RRP + P+ SG P+K D D T+SR RG Q E + P+ + SG R + + H G ++ + +++ DGR RG E D D LR R +T CASL + LQE ++ LD PPT TKS+VGAYIRR+ S GSLAS +ET+EALL VANFGTY+RSEVETLGGVFL FAR Sbjct: 5 QLPVRILDTNQSKWQHGYQPFHFPPDVTRFRL--------------------------GSYVETVGYGCPISTDGSIVHKHDSVQPEAGKISEDVDFDLSMVHKRIYSACLVATTYGKNTFSALRSIQLRILAPSHLLSDSLEREIARVVFSREGCFG-RKRNGSSLPSRQSSMPNVVVLGDIRRLLSQAAAVGGDVGGGPPGVGGEPGAWNLRAPNVLASHVDTPQEEASKVIPLVQCYLRDWIPSIEVIGQELLIRRVYDIVSFLPVGDLEAMKADWVKAGTFGVTKELFLGIMLRVLLRAHVPLRDERQRLELTSLLSDLFDQISRTKRDGAEAFTGLRSGKDVLTWEQFTTFWVEAATINTHSQVGAAPCLCTDAINVPAIGLIEFFADTRLYGYKHRMAVDGVKGGSLDGRAVRCWADETLQWEMDSNFELAVRKPTKLISLPLMHLVVGLEERGSYVSILNGHTGRLHVTLCPSTLQTVTTGGLNPHESFLTVLDVECIDTKGIVVISSTDHAISVWHYNHGSENAIWRCSLHSRSAQILITWVPHERGFLVSAGVDHEVTAWCVDKQLRLAVMQGHRARVTGVTYIPQHGQFATCAFDKTVRLWDADHFAAVAEIKCRSPVKFVDARGDLVLCITLEIEAHVLSVSTRRPWCRLIGHNHLIVGGSMVHFVDARQGRQTRAITGDLRGEFFIWDIGNAEAKNGCAEVMQTFCVYTWRPNLGEIVGFERYHRHVLAGTGSNKC----------ERDNLSKTPGPPTFSFTTV------------------------DKSMDIIASTGQHLRFWNLQTSEPLRMIASPCPQGITAMTTDKPDPKKIYLGTSDGGIAVVHIVTGQLLFEAKNAHNGAVVLVVVCSVSREVVSVGVDRRVAVHREKANGLGLVQAGEIEEAHKVMISACAISQDAQLIATAAGGEIRLWHKQVWYQCSPFKLLRNMFESQVLIVDLSFQGGISDLDADVLGLVFLPGTACLLASDSGGDVVLWVTEFSKAA-----GEARAGNKTAPSGPRSIPSSSAVPDMRGAKATPPSDVEVTAQSDSRPNIHTSGARSAPAWEADEEFIGGDGDGQGGSANDDAAAKAGAGARGPDGVNGSKAGKELLSNAELSDDSEAISAVDKNNPREERSTKHTEATTASFPQAHNKVGRRARPPHPSVATAKRQTGSCTLRPGLLLSGRRVNQAHRSLDDEQSHNQLPQ------QQPSPVYEMHLHSMYDDRKPAESPQQQKSNHGSDGKPSRDTREDDTRTTTGDGASANNAAAASGEQSTDECSESHGTDRAERRTKQVIVTGSAGGWIEVWEAKGLLATAGVDEEAMAAKLQRRQPQERQGVHIQATRVRRSGLTCCTPSAASEFVGGST----KSALEALHPVPPSLRWEAHRGSPVSTLCALDKTPLVVTASTDSTIRLFSLADVQVIAPSLFTPAAPSYTELTPGGVAGENIPAASQSAASTAGRGPSHAASLLEVTEQGRPPSIADHRNAGGTTFLTAVQHEPEGGAADFGRHGDTGNQDSLFPGRGNHGRVHVAYCAPDDRFAGVFAAPVAAAPSTQPGAVTTKENLAGGGKGGMEDRDWQKLIDGNAADLGFRKPAAAELGSTTAKPTRGEPAADKAGIVGHS-VEGAARRGSDSLWDRGQSPPDSFDKQRMTLTSARAAKNHLGKVLYGNMYHEIKSGAACNTLVMEYVHRKNTRGDAVIDTEVSPFLKENLTARLPSLAERRXXXXXQVNGGAKASNSVNGAPASAKSTGGRDTLQSNSWSRTGGGTNT---GTSASTDEAREMLGLERSTGEGGSPGKTSGPDIVENQAQTQQTLEEWHGHPRTHTGSAHGRLPN--RDSGVDNSDGNTGKRVQRRPRFNSPISSG-------------PTKQNIENRAVAT--------DQDHTESRRSVRG-MEPQHEHAASPI------LASG--------RNLAIIKQEDNHCFSRGNH--------SNYRPVAVGRRDGRVGRRRGAEMKNDHEAPGGGTSSSSMD-LRQGRRQITTCASLTTLSLQEMEQRKAYSGSRGAGEDALDRCLVGGGLPPTQCG------ATKSSVGAYIRRRVNPSEGSLASRFKETNEALLGVANFGTYTRSEVETLGGVFLLFAR 2034
BLAST of mRNA_L-elsbetiae_contig1556.3900.1 vs. uniprot
Match: D7FZN0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN0_ECTSI) HSP 1 Score: 947 bits (2449), Expect = 2.600e-313 Identity = 669/1327 (50.41%), Postives = 788/1327 (59.38%), Query Frame = 1 Query: 2128 MSHVWPDILVRGVGGTIVVRTRQLVKDARAANVLVYNDKSMDLIASTGQHLRFWNLQTSDPLRMIASPGPLDITAMATDKPDPRRIYLGTTDGGIAVVHIVTGQLLFEAKHVHNGAVVLLVVCSTSREIVSVGIDRRVVVHREKPSGLGLVLAGSIEETHKGTISACAVSQEAQLIATAAGGEIRLWHKQDLSFQGGISDLDADVLGLVFLPSTACLLASDSGGDVVLWVAEFDKAGAAGTGGDARK-HKTAAS-------------ERFASASAPMD---EAGVDTQQDADARGGRSAPAWEADAEFTA-----------------AGTDANREDCVDGGGGGGLGRSVHRNAGGVEKTGLDRSAAFDQPSAEHTFKSTVEAWASAPLLQFRAQEPLTPPAAAATPRHAGPCTLRPAVLLSSRRVHE-HTKRQEGKDQSQXXXXXXXXXQHSSPVYEIHLHSMYEDYAPSATPPLQSNGPGGGPNGARGDKSSTEGGEGTARQPEDRLPGWPPLKYAGGGQNSY---------RAERRTKLVVITGSAGGWVEVWEAAGFLAAAGVDEDAMAARLLRRQPPER-GSHIRATRHARSGLTCFPPSALSAPAGGSAYTTVKSILEGLDPIPPSLRWEAHRGSPVSTLCALEKTPLLATASTDSTVRLFTLADIQEKGGSATELSRGHLSADLGASITPIP-RGPPGAFTAGHGAPDDR-------PVRAG--TQPAVAEDESSCA----DGHGAMDGSAAQPLNA--IGARGNKHAKFGDVSPGPKKEEGETVTGGEASRI--EVESEAYRGPGRLWEGGRAPSDSFDKQRVTLTSARAAKNHLGKVLYGNMYNEIKSGAACNTLVAEYVLRKNARGDAEVDTKESPFLRDNLRDKLPSRAERXXXXXXXXXXS---TPPATGMRPSMPPTG-----------RGAAVAAHGAAATADHAPELPNKAGGVGQGNLAEQRFDPDC------------ESASH-----DGGGKGRPRQARGXXXXXXXXXGRHCGHLDQSERQEKRLPRRPNYKEPVDSGLAESGGRS-GERHHPSKSQSRXXXXXXAGGTENKH-DTDVTDSRTGRRGGRRRQGEPGSRPLNGESGLV---FSGSSIGGSGRRRAGEVTENSLHGD-------EMGGRRRQQ-IVTSASLKTLSLREMDGREDDSRGREKLGDALDSFLYLKLERGDALRAEERTLTKCASLPSAGLQERWKQMLERFDSAISPSPLDGPPTTTNWSKVKSQTKSTVGAYIRRKPQQSFGSLASGLEETDEALLSVANFGTYSRSEVETLGGVFLAFAR 5787 MSHVWPDI+VRG GGT+VVRTRQLVKDARAANVLVYNDKSMD+IASTGQHLRFWNLQTS+PLRMIASP P ITAM TDKPDP++IYLGT+DGGIAVVHIVTGQLLFEAK+ HNGAVVL+VVCS SRE+VSVG+DRR+ VHREK +GLGLV AG IEE H ISACAVSQ+AQLIATAAGGEIRLWHKQDL+FQGGISDLDADVLGLVFLP TACLLASDSGGDVVLWVAEF KA G+AR +KTAA R A A+ P D A D++ + G RSAPAWEAD EF AG A D VDG G+ + NA + + + + P E + K T + AS+P +A+ A A R G CTLRP +LLS RRV++ H + + +Q Q SPVYEIHLHSMY+D P+ +P Q N + + G S E T + D G A G Q++ RAERR K V++TGSAGGW+EVWEA G LA AGVDE+AMAA+L RRQP ER G HIRATR RSGLTC PSA SA GGS KS LE L +PPSLRWEAHRGSPVSTLCAL+KTPL+ TASTDST+RLF+LAD+QE GG A +L GH D G + P RG G+ + APDDR P+ A TQ + + A G G D +NA +G R + G + P + E + EA + E EA RGPG LW+ G++PSDSFDKQR+TLTSARAAKNHLGKVLYGNMY+EIKSGAACNTLV EYV RKN RGDA +DT+ SPFL+DNL D LPS AER + + P G+ S TG R G +A+ D A E+ A G+G A + P E H D G P+ G + + KR+ RRP YK PV SG S R+ G R P+ Q GTE +H + GR +Q + + G + +GS G RRR G + M R+RQ+ I TSASL TLSL+EM+ R+ S R D+LDS LYLKLE GD L + RTLTKCAS+PS L+ERWK+M ERFD+AISP LDG TTT+ S +KSQTKS+VGAYIRR+ S GSL S EET+E+LL VANFGTY+RSEVETLGGVFL AR Sbjct: 1 MSHVWPDIVVRGAGGTMVVRTRQLVKDARAANVLVYNDKSMDIIASTGQHLRFWNLQTSEPLRMIASPCPQGITAMTTDKPDPKKIYLGTSDGGIAVVHIVTGQLLFEAKNAHNGAVVLVVVCSASREVVSVGVDRRIAVHREKANGLGLVQAGEIEEAHGVMISACAVSQDAQLIATAAGGEIRLWHKQDLTFQGGISDLDADVLGLVFLPGTACLLASDSGGDVVLWVAEFSKAA-----GEARAGNKTAAGGTRSTSSSPAVPDTRGAKAALPSDVEVTAQSDSRPNIHTSGARSAPAWEADEEFVGGDGDGQGGSAKDDTAAKAGAWARGPDGVDGSK---AGKELLSNAELSDDSESISAVDKNNPREERSTKHTEASPASSPQEHNKARPXXXXVATAK--RQTGSCTLRPGLLLSGRRVNQAHRSLDDEQPHNQQPQ------QQPSPVYEIHLHSMYDDRKPTESPQQQKNN-----HSSDGTPSRDTREEDTGKITGDEA-GANKTVGASGEQSTDEFSESHGTDRAERRMKQVIVTGSAGGWIEVWEAKGLLARAGVDEEAMAAKLQRRQPQERQGVHIRATRLRRSGLTCCTPSAASAFVGGST----KSALEALHSVPPSLRWEAHRGSPVSTLCALDKTPLVVTASTDSTIRLFSLADVQEPGGGAADL--GH-HGDTGNQNSLFPGRGNHGSVHGAYCAPDDRFTGVVAAPLAAAPSTQLGAVTTKKNLAGGGKSGMGDRDWQKLIDVNAADLGFRKPSATELGSTAAKPARGE---LAADEAGIVGHSGEGEARRGPGSLWDRGQSPSDSFDKQRMTLTSARAAKNHLGKVLYGNMYHEIKSGAACNTLVMEYVHRKNPRGDAVIDTEASPFLKDNLTDSLPSLAERRRRQRRQVTGAAKASKPVNGVPASAKSTGGRDTLQSCSWSRTGGGINTGTSASTDEAREMLGIARRTGEGGSAGETSGPSIAENQEQTQQTLEEWHGHPQTDTDSANGGLPKSDSGVN--------------NSDDNAGKRVQRRPRYKSPVSSG---SNIRNIGNRAAPTD-QDHTESRRSVRGTEPQHVHAESPILAAGRNRAPIKQEDAPYQQGGNRFGSIDRPVAGSDRDGRARRRRGAGIKXXXXXXXXXXXXXRMDLRQRQRHITTSASLTTLSLQEMEQRKASSGSRGAGEDSLDSLLYLKLEPGDTLSSGGRTLTKCASVPSVDLKERWKEMQERFDNAISPCHLDGSATTTDGSTLKSQTKSSVGAYIRRRVHPSEGSLGSRFEETNESLLGVANFGTYTRSEVETLGGVFLLCAR 1277
BLAST of mRNA_L-elsbetiae_contig1556.3900.1 vs. uniprot
Match: D7FZM9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZM9_ECTSI) HSP 1 Score: 809 bits (2089), Expect = 1.000e-272 Identity = 414/572 (72.38%), Postives = 459/572 (80.24%), Query Frame = 1 Query: 1 SQLPVRILDTNQSKWKHGSEPFHFPPNVTRFRLEFVCFVGDKTSENLDVDISAILFDAKGSYVETVGYGCPSSTDGGIVHRHDSVQPEAGKIAEDIDFDLSVAHKRIFSACLLATTYGNHTFASLRSIQLRILAPSHLLSDSLEREIARVVYTREGCFGGRNQIENSLLCRRSNVPNVLVLGDIRRLLSRTAAVGGEAGGCPR----EAGAWNLRAPNVIASHIDVPHEAIPLVQCYLRQWIPSIEVIGQELLIRRVYDIVSFLPLADLEAMRSHWVDGGTSGVAKNVFLEQMLRVLLRAHAALRDERQRLELTSLLSDLFDQISGSKSGVAAASAGFGPGNDTLAWEQFTTFWVEAATINTHSQAVRCWADETLQWEMDSCFELAVRKPTKLISLPLMHLVVGLEERGGFVSVLNGVTGRLHTTLCPSSLQTVTTGGLNPHDSFLTVLDVECVDAKGIIIISSTDHAISVWMYNHGNESAMWRCSLHSRSAQILIRWVAHERGFLVSAGVDHVVTAWCVDKQLRLAVMQGHRARVTGVTYIPQHGQFATCSFDKTVRLWDADKFTPVAEMK 1704 SQLPVRILDTNQ+KW+HG PF FPP+VTRFRLEFVCFVG+K ENLDVDISA LFDAKGSYVETVG GCP+STDGGIVH+HDSVQPEAGKI ED+DFDLS+ HKRI+SACL+ATTYG +TF++LRSIQLRILAPSHLLSDSLEREIARVV++REGCFG + SL R+S++PNV+VLGDIRRLLS+ AAV G+ GG P E GAWNLRAPNV+ASH+D P E IPLVQCYLR+WIPSIEVIGQELLI SFLP+ DLEA+++ WV GGT GV K +FL MLRVLLRAH LRDERQRLELTSLLSDLFDQIS +K A A G G D LAWEQFTTFWVEAATINTHSQAVRCWADETLQWE+DS FELA TVTTGGLNPH+SFLTVLDVEC+D KGI++ISSTDHAISVW YNHG+E+A+WRCSLHSRSAQIL+ WV HERGFLVSAGV+H VTAWCVDKQLRLAVMQGHRARVTGVTYIPQHGQFATC+FDKTVRLWDAD F+PVAE++ Sbjct: 17 SQLPVRILDTNQNKWQHGYHPFDFPPDVTRFRLEFVCFVGEKV-ENLDVDISAFLFDAKGSYVETVGCGCPASTDGGIVHKHDSVQPEAGKIWEDMDFDLSMVHKRIYSACLVATTYGKNTFSALRSIQLRILAPSHLLSDSLEREIARVVFSREGCFGTKRN-GRSLPSRQSSMPNVIVLGDIRRLLSQAAAVAGDVGGGPPGVGGEPGAWNLRAPNVLASHVDTPQEVIPLVQCYLREWIPSIEVIGQELLI-------SFLPVEDLEALKADWVKGGTFGVTKELFLGIMLRVLLRAHVPLRDERQRLELTSLLSDLFDQISRTKRDGAEAFTGLRSGKDVLAWEQFTTFWVEAATINTHSQAVRCWADETLQWEVDSNFELA----------------------------------------------TVTTGGLNPHESFLTVLDVECIDTKGIVVISSTDHAISVWHYNHGSENAIWRCSLHSRSAQILVTWVPHERGFLVSAGVNHEVTAWCVDKQLRLAVMQGHRARVTGVTYIPQHGQFATCAFDKTVRLWDADHFSPVAEVE 533
BLAST of mRNA_L-elsbetiae_contig1556.3900.1 vs. uniprot
Match: A0A2D4BN33_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN33_PYTIN) HSP 1 Score: 169 bits (427), Expect = 3.770e-38 Identity = 174/727 (23.93%), Postives = 301/727 (41.40%), Query Frame = 1 Query: 688 VQCYLRQWIPSIEVIGQELLIRRVYDIVSFLPLADLEAMRSHWVDGGTSGVAKNVFLEQMLRVLLRAHAALRDERQRLELTSLLSDLFDQISGSKSGVAAASAGFGPGNDTLAWEQFTTFWVEAATINTHSQAVR------CWADETLQWEMDSCFELAVRKPTKLISLPLMHLVVGLEERGGFVSVLNGVTGRLHTTLCPSSLQTVTTGGLNPHDSFLTVLDVECVDAKGIIIISSTDHAISVWMYNHGNESA-MWRCSLHSRSAQILIRWVAHERGFLVSAGVDHVVTAWCVDKQLRLAVMQGHRARVTGVTYIPQHGQF-ATCSFDKTVRLWDADKFTPVAEMKRR-SPVKFVESRGDLVLCITLEVEAHVLSVSTRQLWCRLIGHNHLIVGAAMVHFVDTRQGRQTR-TITGDQMGEFFIWDIGN---GQAKNGCAEVMQTFSVYTWRPNLGEIAGFERFHRHISAVNGGNKANSKQYGDRSQEKSDNSMSHVWPDILVRGV--GGTIVVRTRQLVK--DARAANVLVYNDKSMDLIASTGQHLRFWNLQTSDPLRMIASPGPLDITAMATDKPDPRRIYLGTTDGGIAVVHIVTGQLLFEAKHVHNGAVVLLVVCSTSREIVSVGIDRRVVVHREKPSGLGLVLAGSIEETHKGTISACAVSQEAQLIATAA-GGEIRLWHKQDLSFQGGISDLDADVLGLVFLPSTACLLASDSGGDVVLW 2814 +Q +L IP IE+ + L V I + L + + S++ G GV + F + +L LLRA +QI + G++ + WE+FTTF + I+TH Q + C + L + F +R+ + SL M + +E + V + + LH + LQ V + D L +LDVE V A+ ++++SS+DHAIS W + A ++ + SRS +RW + S+ V W +D + + H R+T +P ATC+FD + + + ++ V+ ++ +++ E +A+ SVST+ L L GH ++GA FV +R T +TGD+ G F +WD+ G + ++Q F V T A RF ++G Q D+ + P+ + V G V R R +V DA + + +N S + + + W+ T + D+ + D P R++++ T+DG I + + +T +L + +H+G + L+ C S ++S G DRR+ V + + ++E H+ I+A A ++E L+AT G + ++ Q L ++L L F S A LL+SD G +W Sbjct: 256 MQVFLLDIIPDIEIAHRNAL-NSVASICAALSSDEFLGIESYF---GARGVTREAFAKILLLTLLRARRRXXXXXXXXXXXXXXXXXXEQIDIN-------------GDEAVDWEEFTTFCISVGLISTHEQPLGATTYAGCSYRQQLVGPLHRTFSYQIRR---IRSLSAMRRIAVIENKSPVVLMYDADMTFLHEM---NHLQRV----VGSDDDSLALLDVEHVPARNLLVLSSSDHAISCWSVVNATSGAYVYAFKIGSRSPIPYLRWCVALNRLVTSSSEG--VQLWDLDARRVSSRWTHHLDRMTDCLELPGPPPLIATCAFDAKIVMLELPSLRTAFTLEGHVQGVQQLDHLNGVLVSSGFEHQAYCWSVSTQTLLTTLGGHQASLIGA---RFVSSRAATSTALVVTGDEAGHFRLWDVSRCVKGYSTE-LVSLLQCFDVAT--------ANLCRFRVFAVGLSG-------------QAAGDSRRARARPETDIADVVTGAFRVFRFRAIVHSVDAVPPSHVTFNSVSSAFVGAVDGIITVWSANTGAKIEEPIVLRDADVCGVVFDVPRQRKLFVATSDGAIRLFNPITATMLAKTI-IHDGVISALIFCPRSSCLISTGYDRRICVSHSSAGKTDIEVLRTVENAHESCITAAAFNEELDLVATGDDAGNVHVYDFQKLYLLFSCCGHATEILSLTFHYSAAILLSSDGDGVAFVW 927
BLAST of mRNA_L-elsbetiae_contig1556.3900.1 vs. uniprot
Match: A0A5D6Y2E8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y2E8_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.620e-36 Identity = 185/761 (24.31%), Postives = 319/761 (41.92%), Query Frame = 1 Query: 604 PREAGAWNLRA---PNVIASHIDVPHEAIPLVQCYLRQWIPSIEVIGQELL--IRRVYDIVSFLPLADLEAMRSHWVDGGTSGVAKNVFLEQMLRVLLRAHAALRDERQRLELTSLLSDLFDQISGSKSGVAAASAGFGPGNDTLAWEQFTTFWVEAATINTHSQ----AVRCWADETLQWEMDSCFELAVRKP---TKLISLPLMHLVVGLEERGGFVSVLNGVTGRLHTTLCPSSLQTVTTGGLNPHDSFLTVLDVECVDAKGIIIISSTDHAISVW-MYNHGNESAMWRCSLHSRSAQILIRWVAHERGFLVSAGVDHVVTAWCVDKQLRLAVMQGHRARVTGVTYIPQHGQFATCSFDKTVRLWD-ADKFTPVAEMKRRSPVKFVESRGDLVLCITLEVEAHVLSVSTRQLWCRLIGHNHLIVGAAMVHFVDTRQGRQTRT---ITGDQMGEFFIWDIGN--GQAKNGCAEVMQTFSVYTWRPNLGEIAGFERFHRHISAVNGGNKANSKQYGDRSQEKSDNSMSHVWPDILVRGVGGTIVVRTRQLVKDARAA--NVLVYNDKSMDLIASTGQHLRFWNLQTSDPLRMIASPGPLDITAMATDKPDPRRIYLGTTDGGIAVVHIVTGQLLFEAKHVHNGAVVLLVVCSTSREIVSVGIDRRVVVHREKPSGLGLVLAGSIEETHKGTISACAVSQEAQLIATAA-GGEIRLWHKQDLSFQGGISDLDADVLGLVFLPSTACLLASDSGGDVVLWVA 2820 PR G W A P + S I VP A +Q +L IP +E+ + L + V +SF +EA +GV K+ F +LR L+ A L+ + L +LL ++F+QI + G+ + WE+FTTF + I T Q A A Q + A P ++ S + + +E + V + + H L DS VLDVE V A+ ++ ISS+DHAI++W + N + ++ + +R ++W R L++AG +H W +D Q A + HR RVT + G FATCSFD+T+ +W+ A + V ++ + +L E A+ H H ++GA V T +TGD+ G F +WD+ + + A ++Q+F + T NL ++ F SA G+ A R + ++ ++ DI+V G + R R L +A + +VYN + + S + W+ + + ++ + D P R++++ T+DG I + + +TG L+ +++ +H+G + L+ C + ++S G DR + + + + ++E H+ I+ACA S + L+AT G ++++ Q L +V L F L++ DS G V +W A Sbjct: 793 PRSRGEWLFHALGEPAAVRSAI-VPALA-EAMQVFLLDIIPELEIPNRNALTSVGAVCAALSFDEFLGIEARFP------AAGVRKDDFARLVLRALVHARPELQHAARAAALVALLFEMFEQIDIN-------------GDARVDWEEFTTFCISIGLIATSDQELGGAANLHAPSYRQVPVGGGAVKARSFPYQIARIKSFTQLKRIAVVENKSAVVLMYDADLVLQHEMSGVEKLL--------GKDSEPAVLDVEHVAARNLLAISSSDHAITLWAIVNLATGAYVFASKIVNRFPVAQLKWCGPLRR-LLAAGAEHA-QLWDIDAQRVDARLGHHRDRVTDYAELGATGYFATCSFDRTIAVWEVATRRVAFVLEGHAQGVLALDYAQNTLLSSGFEYRAYCXXXXXXXXXXXXXXHQHRLIGAKFVSGRTAAGAAAAGTALAVTGDESGRFKLWDLSRCVRGSTSDLATLLQSFELRT--ANLCRLSTFSCGVAAPSASASGDAA-------RKLKSAETELA----DIVV---GNLQLCRFRALAHADESAPPHHVVYNAVANTFVGSVDGCITVWSAHSGVKVEAPIHIRDAEVCGIVFDVPRERKLFIATSDGCIRLYNPITGMLMTKSQ-IHDGVISSLLFCPRTCCLISTGYDRNICISHSTAGKTDVEVLRTVENAHESCITACAFSADLDLVATGDDSGCVQVYDFQKLYLLFRCESHRHEVRALHFHVQAPLLISGDSSGVVYVWQA 1505 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1556.3900.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1556.3900.1 >prot_L-elsbetiae_contig1556.3900.1 ID=prot_L-elsbetiae_contig1556.3900.1|Name=mRNA_L-elsbetiae_contig1556.3900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1930bp SQLPVRILDTNQSKWKHGSEPFHFPPNVTRFRLEFVCFVGDKTSENLDVDback to top mRNA from alignment at L-elsbetiae_contig1556:7679..24676+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1556.3900.1 ID=mRNA_L-elsbetiae_contig1556.3900.1|Name=mRNA_L-elsbetiae_contig1556.3900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=16998bp|location=Sequence derived from alignment at L-elsbetiae_contig1556:7679..24676+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1556:7679..24676+ >mRNA_L-elsbetiae_contig1556.3900.1 ID=mRNA_L-elsbetiae_contig1556.3900.1|Name=mRNA_L-elsbetiae_contig1556.3900.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=11580bp|location=Sequence derived from alignment at L-elsbetiae_contig1556:7679..24676+ (Laminarionema elsbetiae ELsaHSoW15)back to top |